 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | RPAP2,CCDC65,MFSD8,DNAJC27,LIG3,TTC31,CFAP20,RHNO1,SLF2,TMEM184C,HLTF,PIGG,SENP1,GPATCH11,HMGCS1,TFIP11,WDR5B,ST7L,FAM200A,COG6,TRIM5,FAM133B,TERF2IP,TTC14,BRPF1,CCNK,PPIP5K2,SRSF4,SPTY2D1,XPO7,ZFP1,ZIK1,NCBP1,PPIL4,RGP1,TRIM68,SMC2,PSIP1,RIC8B,UBE3A,THOC2,TMEM231,ZBTB6,OTULIN,GTF3C2,ARHGAP11A,MSH6,PURA,MIS12,LMAN2L,ZNHIT6,HERPUD2,CTDSP2,SEC63,NEMP1,ZFP82,CDC25C,MIS18BP1,MDN1,FAM53C,SRPK1,DONSON,MBD4,ORC2,VGLL4,MCM3,PHC3,INTS2,SUPT20H,UBXN2A,CDKN2C,TCTN3,SLU7,HROB,SMARCAD1,GTSE1,KHNYN,MBTPS1,SSX2IP,IPO9,ATG2B,HUWE1,AP4E1,DDX42,WDR35,KDM1A,CSNK2A2,MKRN2,SEC24C,CCDC34,DNAJC24,PGGT1B,GCA,BRD3,CCNF,ZMYM1,ARHGEF9,TMEM168,IPO8,NOB1,FANCL,GNE,TTC17,BRAP,KIF18A,MIB1,NEMP2,POLR2C,KLHL15,VEZF1,PRPF40A,GSK3B,INO80D,ICE2,SMCR8,TCAIM,PHF7,KPNA1,MAPK9,CIP2A,ZXDA,BANP,KIF4A,DNAJC21,RIOX2,TRNT1,FANCA,CHD8,KIAA1143,DENND6A,TMED8,IFT74,UHRF1,PSMD7,XPO4,UFL1,FEN1,UTP14C,BBS2,RFWD3,DDX20,RFC4,CPLANE2,LIN54,LRIG2,PARP2,SEC23IP,ABCB7,OSBP,DTWD2,SART3,SRBD1,C6orf120,KCTD18,PLEKHA8,RNF20,EYA3,RNF31,NVL,ATG14,GOLGB1,PWWP2A,RPE,SLC39A10,ATRN,RPGRIP1L,ANKEF1,SCAF11,DDX11,PUS10,CNOT7,DIABLO,ZNRF1,UEVLD,KIF3A,TYW1,TIMM23B,ANKMY2,CSTF2,EXOC7,NCK1,MIDEAS,EPB41L2,UNC119B,PIK3CA,LMLN,ATAD2B,PREPL,PI4KA,ESCO1,PBX2,KLF12,ATPSCKMT,NAA15,POC5,MYSM1,METTL15,TTC23,UIMC1,ELF1,UVRAG,RBBP8,MKS1,C9orf64,DZANK1,NUP153,TTI1,DHFR,TASP1,IFT88,CRY1,SUGT1,GTF3C3,DHFR2,XPC,TICRR,MYCBP,PRR14L,FYTTD1,BARD1,ERLIN2,N6AMT1,KANSL3,INIP,MPHOSPH9,HECTD1,NUP37,INTS7,EDC4,TMEM209,AGO2,ARL13B,XRCC2,TERF2,MLH3,KIF20A,KANSL1L,WDFY3,SMC5,HEATR5B,CHD4,BRCA2,ZNF106,VPS53,LCOR,MEAK7,PABIR2,FBXL20,CENPC,HERC2,IQCK,WBP11,TUBGCP4,PARN,PRRC2A,C2orf49,POLK,RAD51C,DCAF12,PRDM2,WRN,RBL1,SPATA5,LCA5,BAZ1B,USP12,METTL6,TIA1,MOSMO,FCF1,INTS9,ZNF8,SNRNP200,CDK2,PARP1,ERCC3,FAM13B,PLK1,GTF3C1,BRCA1,MTMR9,PTBP3,WDR6,BRD8,NIF3L1,ERCC8,TMCC1,UBE2V1,GSPT1,MAPKAPK5,BROX,APPL1,RBM33,ADAL,NOL8,BUB1,PRMT5,FPGT,POLR1B,PDZD8,EXOC5,ZNF2,GXYLT1,HSBP1,LNPK,POLR1F,POLE3,MAP3K2,CSNK1A1,RPRD1A,GPATCH2,MUTYH,RPTOR,NHLRC2,CAAP1,RUFY3,CKAP2,ZFYVE26,ANKRD42,KMT2E,CWC22,C2orf42,DCAF16,ACVR2B,PEX1,S100PBP,KAT6B,FBXW8,SUPT16H,PDSS2,CHTF8,RNF216,IQCD,TRIM23,TSC2,DTWD1,PCNT,N4BP1,YEATS2,USP54,TAF1C,RBM14,RB1,TMEM241,IKZF4,TEFM,TCEANC2,PIP4K2B,NF1,SPIN4,THAP9,KIF14,THAP6,DHX15,CSTF1,KIF20B,KLHL12,AQR,SENP7,EHHADH,TAF2,TRIP11,TRPM7,GTF2E1,MCM8,ACLY,TRAPPC8,KCTD20,ARSK,MKLN1,PHIP,LRRC58,DUS4L,CCDC93,LMBR1,GANAB,UBAP2,HP1BP3,SPATA33,TAPT1,CBR4,PRR11,USO1,DIDO1,CYREN,FKTN,ALG9,CEP41,PUM2,AXIN1,DHX36,MKRN1,OXCT1,TYMS,NEDD1,ARMC1,KATNIP,SPG11,FBXO42,PDCD7,NCAPD3,ITFG1,EMC8,INTS4,MAPK1,PUM1,USP22,NUP155,TXNL4B,CENPK,RB1CC1,CILK1,FASTKD3,ZRANB1,DYNC2LI1,CMC2,DCP1A,DMTF1,ZDHHC23,RFC1,FAM193A,NSD3,HSDL1,SNIP1,CDCA5,SF3B3,WDR54,KAT6A,AFF4,LZTFL1,STRBP,RNF38,LBR,PARG,KPNB1,DEK,SETD2,SIN3A,MEX3C,CREB1,SUDS3,MAP2K5,SPG7,CAPN7,CHAF1B,USP49,SMAD2,CLCN6,RFX2,OGFOD1,VPS35L,MYEF2,ASH1L,CASC3,PTAR1,CEP152,CIT,IFT81,KATNAL1,CPSF7,TRIM37,NPHP4,AGBL5,NASP,VPS36,ACYP1,FBXO38,TBCCD1,IFT172,HCFC2,PRKACB,SLC4A1AP,SKP2,RSRC2,GLG1,USP46,ZWINT,NAA25,PRMT9,TM9SF1,SLC35A3,ZBED8,CHD9,LMAN1,PIGN,DNAJA2,AGO3,PRPF38A,SBNO1,POGLUT1,POGLUT3,MLLT3,ABHD16A,MRPS27,TSSK6,RNF111,PAN2,LRTOMT,MKI67,MOAP1,PPIL1,STAG2,PKN2,CHEK1,CENPH,SLC30A6,METTL4,EIF3L,MTMR4,ATXN2L,DNASE1,SDE2,CCNT1,TTC3,ORC6,ATF7IP,BRD4,NARS2,CES2,RSPH3,ATG4C,IQCC,SKA2,RAB28,PDCD10,LUZP1,DPY19L3,SMG7,CKAP2L,DCLRE1B,LCORL,CSNK1G1,CEP57,METAP1,SPICE1,LNX2,ARMCX4,AZI2,HAUS2,RTL6,BRCC3,DDX55,SHQ1,METTL21A,WDR59,UBA6,ACAP2,NUMA1,ADD1,TNKS2,LANCL1,IFT140,NDC1,UNG,AP5M1,OPA1,BCOR,ARL6IP1,DENND11,LYSMD3,ATP7A,DZIP1L,MSH3,ASCC1,SRP54,NEK9,EP400,GLT8D1,DDX6,TRMT2B,C17orf75,LCMT2,TMED10,SLX4,PHF13,RPRD1B,ACIN1,TMEM182,E2F7,TNRC18,TTC8,TAOK2,MBLAC2,ZNF48,GTF2A1,CEP85,CCHCR1,ZNF28,PRMT7,NUBPL,BOD1L1,KATNB1,CHD2,TPGS2,METTL14,VPS4B,OTUD4,RABL3,UPF3B,TMPO,HAUS1,POLR1A,TRIM4,HERC3,GDAP2,RAD50,PIGK,CCDC82,SBF2,LPP,LRBA,ELP1,KIF18B,TXNRD3,RRN3,DIAPH3,CIAPIN1,CHD1,FANCC,HECTD4,HPS4,MCPH1,NBPF1,XPO5,USP45,UBE3B,TAF6,GOPC,NCOA2,CENPU,MED17,STMN1,DNMT1,PLCG1,NCAPG,PRKAB2,RALGAPA1,MDM1,MED13L,POLH,E2F8,ASPM,SMG6,NEK4,MCM2,SUV39H2,MIS18A,POFUT1,RNPC3,CCDC77,DOP1A,KIAA2026,KMT2C,SIKE1,STAU2,SCAF4,MARCHF8,RRM1,ORC3,CENPQ,NEK2,ZNF91,ZFP91,NUP160,TRAPPC11,OPHN1,SHCBP1,ATP13A3,TUBGCP5,RBM25,KLHL9,SMARCC1,TTC30A,UBR5,PRIM1,SERTAD2,DTL,CCNE2,E2F6,PSKH1,EPC1,ZC3H13,PANK3,HEATR6,MAP3K7,AAGAB,NEPRO,POLQ,TCF19,SRPK2,ANKRD27,USP37,USP19,TMEM161B,KRR1,EPM2A,FAM149B1,ATAD2,ADAM17,PPP4R3A,RFX3,TMEM245,VSIG10,CAD,GOT2,USP48,WWP2,HELZ,ELF2,ZNF43,CDC14B,PMS2,RECQL,TPP2,ADAT1,RCC2,SOS1,PARP16,AVL9,MED1,ZDHHC21,WDR37,SEC22C,AP3M1,PPP2R1B,KIAA0100,TNPO1,C18orf54,MSL2,UBE2I,POT1,STAG1,ZCCHC8,COPG2,KAT7,VAC14,KAT8,AASDH,SF3B1,ANKIB1,ATP11B,GOLGA1,MINDY2,USP24,SOS2,POGZ,CCDC43,BRWD3,FBXO45,AKAP10,RBMX,RBM4B,CCDC102A,C21orf58,ORC4,FUBP1,MMUT,SMPD4,TRIM33,CXXC1,HMGB2,NBAS,KIDINS220,DCAF1,DDX17,C12orf66,HAUS5,UBTD2,FMR1,BBS12,DHX33,EPB41,CTDSPL2,SDR39U1,LIN52,SMC6,SLC24A1,GPALPP1,C16orf87,UBFD1,WDR31,DLG1,E2F4,ANO6,CERT1,STK36,SS18,ZFX,VPS35,RMND5A,CBWD2,RABGAP1,CPSF3,CEP162,TRIP12,ZFP28,RAD18,ZNF17,SRCAP,CRBN,RNF169,POLD3,ZNF84,BAZ2B,CCP110,BICRAL,KIF15,BSCL2,CLSPN,JMJD1C,LRRC6,NGLY1,NAE1,KBTBD2,USP13,TRMT10A,ATF2,DLGAP5,C6orf89,REPS1,HELQ,CPLANE1,CEP76,ERI2,LARS1,CSNK1G3,MCM7,IPP,MFAP1,PPID,CHM,SUGP2,NCAPD2,HSPA14,ARL2BP,ACD,PHF10,NUP50,UBE4A,ZBED4,WDCP,PLRG1,SLC25A40,ZFP14,TIMELESS,CCDC14,SMARCC2,MYO9A,KNTC1,RANBP6,CEP72,GKAP1,TRIM59,SLC33A1,EXOC8,ATR,STRN3,HSPA13,RCCD1,GZF1,CNST,FBXO5,TUT4,DNAJC16,RBM15,CEP89,MOCS3,BBIP1,ESCO2,ATXN7,PRC1,RFX7,MAP7,VTI1A,MBD5,RAF1,ZADH2,GON4L,CDC27,CERS6,RACGAP1,RBM22,CHIC1,ZNF45,YTHDC1,COQ7,TMEM185B,DCTN5,TFCP2,PASK,MLH1,MTMR2,SMC1A,CCDC191,HIF1AN,TNKS,NR2C2,PPP4R2,TAF1A,BICD1,RMI1,SCRN3,FAM114A2,XPO1,STAM,NCAPG2,MBTD1,SEPSECS,IFT122,FBXO21,MAN1A2,MANEA,GAS8,DVL2,RAB3IP,CEP192,KAT14,VPS13A,SF3A1,ZFP3,RNF214,MAPK1IP1L,OARD1,PIK3R4,THADA,FAM172A,CEP20,ILF3,CAND1,PRR3,NICN1,NEK11,FAM168B,WDR53,PPWD1,RC3H2,DARS2,SASS6,CLASP1,ASTE1,ADGRA3,COG8,MNS1,CASP2,KRIT1,SRP68,DCAF7,COG5,VPS50,WAPL,ZZZ3,HMGN2,ZMYM5,C2CD3,GFOD2,PDCD6IP,SETX,TOP3A,TRIM13,PHC1,PABIR1,MTRR,SSRP1,PUS7L,MED6,SLC39A9,GGNBP2,ERCC6L2,TBC1D10B,CABLES2,FBXO3,RTTN,REV3L,WDR47,IWS1,PEX26,ZFYVE1,AGTPBP1,CEP70,ENOSF1,MAU2,DZIP3,FOXM1,WDR7,TOX4,TMF1,SSH2,MLLT10,BHLHB9,TSTD2,MED23,BAG5,MTIF2,ZNF720,STIL,MIER3,CDCA8,BTBD7,GPBP1,ARHGAP32,ANLN,LSG1,EHMT1,TTBK2,TP53BP1,CDK19,ZFHX3,ARID4A,PIGF,SMAD4,AASDHPPT,TTC37,WASF2,NSL1,FAM104A,BBS7,CDCA2,TFDP2,PNISR,GEN1,SFPQ,SMARCA1,DNAJC9,ARHGAP42,GALC,ZNF10,CEP120,TGFBRAP1,PKP4,ROCK1,IQCE,N4BP2,PHF19,CEP250,ARID2,NUP214,SMARCAL1,STAM2,TTC5,PLEKHH1,DBR1,HEATR1,WDR3,PBRM1,URB2,POLE2,PHKB,TCAF1,TENT4A,PPP4R3B,USP10,NUSAP1,MTMR12,PHF8,CHD6,U2AF2,DFFA,RNPS1,C5orf22,SLC7A6OS,KARS1,ZFP30,POLI,LIN9,KIF24,SRRM2,PJA2,CMTR2,UBR3,CEP44,DBT,PROSER3,GMCL1,C10orf88,ANKRA2,TUBA1B,CELF1,CDC40,CCDC121,EPG5,PEX3,OGG1,PMS1,QRICH1,DNAAF5,DEPDC1,NSUN6,C5orf34,FAM161B,UHRF1BP1L,RUSF1,COPB2,RBBP5,SZT2,MYO18A,PRKDC,GIN1,CRAMP1,NUDCD2,ARL6IP6,CENPI,XRN2,CCAR1,CHAF1A,CENPJ,C14orf93,TMEM131,CDK14,MTREX,SLC10A7,PCBD2,NANP,MFAP3,GTF2H3,STX2,RUFY2,HCFC1,RAD17,PDCL,USP51,NUP133,ZNF16,USP34,RBM39,EDC3,INTS14,GPATCH8,MDC1,NME7,RIBC1,FAM120B,SCRN1,CKAP5,EIF3C,INTS3,TRIM39,PDS5A,EFCAB14,ATRX,LMNB1,NOL10,RBM28,IKZF5,EME1,ZBTB5,BCLAF1,PIK3CB,OGA,RNF168,ZC3H4,TTK,SCLT1,ANKRD52,DPP8,APAF1,TOGARAM1,B4GALT4,FAM76B,H2AZ2,ADNP,MBD1,ARID1B,ERC1,GID4,PRDM4,TCF20,FTO,POLR2B,RSBN1L,CEP43,DYRK1A,STRN,MARF1,INO80,CEP290,NEK1,RAD21,TMEM107,COIL,CPSF2,RSPRY1,USP21,ALS2,NSD2,TRIM52,NCBP3,BRPF3,SAP130,STRADA,CSNK2A1,NAF1,RANBP9,LMBRD2,TOP2A,CREBBP,CHURC1,PSMC3IP,CHML,GMEB2,SFMBT1,TRMT61B,DOT1L,SDAD1,ARHGEF12,TUBD1,UTP15,LONP2,CDCA7L,FRYL,TBC1D31,NGRN,NSUN3,TBC1D5,TET2,RABL2B,CFAP97,RDX,SPAG9,GART,SKA3,CMTM4,XRN1,TTF2,MYCBP2,GLYR1,BRD7,AP3B1,ANAPC1,WDR89,TAB2,DIAPH1,DHX38,CCDC88A,TXNDC16,FBXL4,UNKL,ZNF24,ASCC3,PIGW,PIGX,GSTCD,RHOT1,KLHL28,NOP9,RSF1,NUP58,HIRIP3,VIRMA,COMMD2,USP30,RPAP1,RNF40,COG4,KDM5A,GINS2,ARHGAP19,SIAH1,ARID4B,FANCD2,FAN1,TOP2B,RPAP3,FANCE,BLM,HS2ST1,RABL2A,RBBP4,TMEM39A,CEP19,H2AC11,FOXJ3,SLC35A5,CBX1,NCOA6,TTC21B,NPAT,FANCF,ANKRD11,AP1G1,C4orf46,ARID1A,NBR1,JPT2,NIP7,SETD5,C19orf54,ZFP62,SOCS4,RUVBL1,BRAF,DHODH,NKAPD1,GUF1,SLC35F5,PRRC1,CAMSAP1,LRRC37B,DHX29,AARS1,RSRC1,NFYA,TAOK3,KIF23,ANKRD28,FIGNL1,FUT10,R3HDM1,BRD2,LSM11,COG7,CCDC186,PAQR4,CDCA7,MIOS,CLCN3,CENPE,PFN2,SP3,HIPK1,GALK2,PAFAH1B1,DHX16,PALB2,EIF2AK2,ABCE1,SLF1,MARCHF6,RFFL,EIF4ENIF1,CUL3,LTN1,PLCH1,ATM,UBN1,IFT57,SNX19,RBBP7,MED14,CDK13,TRAF6,ZC3H10,BBOF1,RELCH,RSBN1,PIBF1,AHI1,CNOT6L,FAM111A,PARP11,GCFC2,UBR1,PHF12,RPA1,ACTR8,EZH2,PDP2,SNRNP48,RC3H1,NBPF3,SMG1,TAF7,ELP4,BCLAF3,SLC35B4,MFSD9,DNAJB14,PPM1B,MCM9,IFT80,GMPS,ABRAXAS1,ZCCHC14,CDK5RAP2,UBN2,KIAA0586,SBK1,ABHD18,SLC5A3,POLR2A,SMYD4,PRKD3,ZNF41,ZC3H8,METTL16,LATS1,ATE1,WDR82,KNOP1,SLC38A9,APPL2,TADA2A,TGDS,KIAA1958,WDR76,KMT2D,SYNRG,CENPO,USP40,GPR180,MCFD2,TRIM44,TUBGCP3,CBLL1,ANKRD26,BTBD10,WAC,MRE11,TRMT13,NT5C2,AGPS,ARPP19,LYRM7,PAXIP1,SYNE2,CBX5,KIAA1549,RYK,EPM2AIP1,NAA35,ST3GAL2,FAM168A,PSME3IP1,MAML1,GTF3C4,ANKFY1,BORCS5,TPR,NOC3L,CEPT1,DDX23,MCM4,NCBP2,NUCKS1,DET1,TNPO3,INVS,EXO5,BCL2,CEP63,TMEM17,EIF3A,XRCC5,WDR11,EXOC2,KDM3B,RBM23,CEP57L1,FANCG,UBTF,SEC24B,VPS13B,GABPA,SLX4IP,TTC30B,ZC4H2,DCAKD,PDPK1,ATMIN,GFM2,UBXN7,LRCH3,CNOT4,SON,USP11,DHX57,ALG12,RLIM,TDP1,SMU1,NDE1,NFRKB,RAD1,CTPS2,BRWD1,CNOT1,NIN,CSTF3,DDI2,NAPEPLD,C12orf65,MCM10,RO60,TBCK,ACBD3,BBS10,SP4,RBM43,SETD6,MAP7D3,LNPEP,CDC23,HDHD2,KIAA0753,VPS41,MAP4K5,PHAX,ASF1B,RBM41,CWC27,RNGTT,POLR2D,FBXW11,CCNL1,HMMR,TLK1,USP28,PSPH,TMEM263,ASB7,POMT2,NCOR1,SCMH1,RBM45,NFXL1,GEMIN2,VIPAS39,DDX31,DCUN1D1,NUP98,SPOP,WDR36,RANBP10,KANSL1,ZMYM3,DNMT3A,HAUS6,SYNJ1,CLINT1,FAM161A,POLE,G3BP2,STX17,PPP2R5E,CWF19L2,EMC1,PNN,MICAL3,DSN1,LUC7L2,GAPVD1,ARHGAP5,BBS4,THNSL1,SNX13,TEX30,KMT2A,REV1,KDM1B,CNTROB,PAIP2B,CEBPZ,HACE1,GABPB2,ATXN7L1,CFDP1,ODF2L,TAF9B,TBL1XR1,NRF1,ZXDC,NSRP1,FNDC3A,ZC3H7A,BAZ2A,BRIP1,GEMIN5,HJURP,PAK2,MAP3K4,CEP350,CENPN,PTCD2,CLASP2,SUPT7L,EXTL2,RICTOR,ARL6,OSGEPL1,RBM4,RAB11FIP2,URI1,USP7,EXOG,NCOA5,PAFAH2,GAN,DCAF5,ANKRD40,PRIMPOL,GCN1,WDHD1,TENT4B,TIRAP,SCAPER,FBXW2,TTLL1,POLR3A,PRPF4,SLC7A6,MCM6,ASXL2,GCC1,SLC25A17,COX15,ATAD5,PFAS,C12orf76,VPS52,ELK4,TIGD1,CNNM3,USF3,FBXO11,BBS9,CWC25,ZW10,TEX10,APPBP2,KIFC1,CNOT2,RBM48,PIKFYVE,SPAG16,RAB3GAP1,NKTR,IPO5,FARP2,SLC30A9,CUL2,WDR33,PTPRA,NRIP1,C17orf80,TRA2B,KLHL7,PIAS2,TIPIN,ASXL1,TSC1,USPL1,TTC33,LIG1,PRPF4B | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | TTF1,C16orf52,ARHGAP19,C16orf72,NOL10,PRPF40A,KDELC2,DNASE1,CCDC102A,AP1G1,NUP98,XPO1,TAF1,WAC,VPRBP,BRPF1,RBBP5,RASA1,C21orf58,RBMX,DGCR8,VTI1A,HDHD2,OXCT1,CSTF1,BRIP1,E2F4,EFHC1,FBXW8,GDAP2,ELP2,MAP2K5,CDK5RAP2,RAB11FIP2,ELF2,PLK4,UTP20,RALGAPB,KIAA0355,IST1,HAUS6,KLHL9,QSER1,AGO2,BRD7,TANGO6,ZFX,KIAA1586,SETD6,UBXN7,MRPS27,TMEM107,NLK,NCOA2,ATG4C,TET2,INTS3,PTGR2,TCAF1,TRIM5,KMT2A,CCNG2,FOCAD,ARID4B,TMEM39A,DLGAP5,CCDC66,ERCC4,SKIV2L2,ASH1L,EXD2,SMU1,STRADA,BROX,NEK1,HIPK1,WWOX,UBTD2,SS18L1,PRKD3,SPICE1,FBXO42,ATM,DEK,IFT81,PRMT9,MOB1B,KAT6B,CDK13,FAM111A,BRD4,PHAX,METTL4,PIGV,GOT2,SMC1A,DNAJC21,FAM192A,SRPK2,PHF2,ERCC3,CTDSP2,GSE1,CDADC1,ERI2,APPL1,CDC27,COL4A3BP,LYSMD3,POGLUT1,CDV3,PCNT,MCM6,NBPF1,SCAPER,MED13L,NFRKB,SIN3A,FAM161A,XPO4,DONSON,REST,FANCA,C6orf89,METTL6,PUM2,UIMC1,TUBGCP4,ARL13B,RAD54L,RAPGEF2,GPALPP1,TAF3,FER,C2orf44,NCK1,NPEPPS,CPSF3,ACVR2B,KIAA1429,WDR48,SLK,CRKL,DHX29,TRIM44,SLC4A1AP,FAM208B,ATP2C1,NAPEPLD,FBXL20,FAM133B,PAIP2B,MINA,GNE,SSH2,USP9X,AGO1,ZC3H11A,METTL16,MFN1,NOL8,ACBD3,DBR1,MAP3K4,PIGF,PIK3R4,E2F6,USF3,PFAS,C17orf75,LARS,IFT74,MPHOSPH9,TLK1,ZFHX3,PDCL,SETX,MAGI3,DLG1,XPNPEP3,USP33,SKA2,KDM6A,ARL6IP6,NPAT,TMPO,ATXN2L,ACYP1,ICE2,SBK1,WDR35,CEP120,CWC27,MTIF2,ARHGAP5,KNTC1,ATXN7L1,TICRR,G3BP2,BCAS3,HACE1,PCBD2,PRRC2B,COG7,DFFA,USP34,PDCD6IP,KIF22,NCAPG2,SEC24B,PAFAH1B1,RFX7,FAM104A,CTR9,PPIL1,MAN1A2,ACLY,WDR60,ORC4,KIF14,INCENP,TBC1D5,ZZZ3,TOP3A,LASP1,SMG1,ANKRA2,MAP3K2,NCOA6,ADGRA3,CERS6,AFF4,LMAN2L,RPAP1,DNAJC13,SLC39A10,DDI2,C7orf49,GCN1,RABL3,DDX17,SPTBN1,E2F8,KPNA4,KANSL1L,MSL2,IFT140,IQCE,MAZ,CTPS2,TTC27,TIGD1,CLCN3,LCOR,FAM64A,TAF2,ZNRF1,KLHL7,PJA2,KPNA6,NIN,RSPRY1,C17orf80,SUPT7L,PIK3C3,CEP89,PTPRA,MIS18A,ASXL1,C12orf66,ASCC1,ZC3H6,WRN,WDR3,LCORL,SP4,ZFP82,INTS9,PHACTR4,TUBGCP3,TXNL4B,RBBP8,POLD3,TMEM131,CSNK2A2,U2AF2,CSNK1A1,USP24,CCDC121,RTTN,ILF3,EYA3,ABHD18,ANKRD26,NFX1,MAVS,GAPVD1,HELQ,ARFGEF2,ACAP2,RALGAPA1,LRBA,PALB2,UTP15,BAZ1B,NEU3,FANCG,APC,MFSD8,TGFBRAP1,GNL3L,NPHP4,CNOT6,POLR1A,S100PBP,DDX31,C19orf54,CPSF7,RLIM,SLX4,RB1,OPHN1,PDCD7,DDX10,NEMP1,NSD1,NEK4,FAM76B,ASCC3,DCAF7,ATXN1L,NAE1,SMARCC2,CEP57,CCNE2,OSGEPL1,HAUS1,VIPAS39,GPBP1,SF3A1,BRWD3,ORC2,CNST,CBFB,NBAS,VPS4B,PPIL4,SOS2,BCL2,PBX2,MAPRE1,C16orf87,TRIM4,TBC1D10B,FBXO11,PURB,ARHGAP42,SENP2,BRAF,CCDC138,NCBP3,BTBD10,RAB3GAP1,SZT2,HHAT,CENPE,CWC25,RIF1,CELF1,ENOSF1,KRIT1,ZFP91,ARID2,APPL2,FOXO3,KMT2C,DPP8,TEX30,POLR2A,LRRC8B,USP28,PRRC1,KIAA2026,TXNDC16,MTRR,C17orf53,MAU2,DNMT1,RNF38,BBIP1,GLG1,VTA1,NUMA1,ARL6IP1,NEK2,CAD,POLR3A,CDC23,ZNF48,RSRC1,MAPK1IP1L,PHF19,BRPF3,KMT2D,TFCP2,LIN52,ATAD2B,SUN1,RC3H1,CLPX,SPIN4,RSRC2,FAM199X,WDR59,TTC30B,POM121,BRCA1,RANBP2,ODF2,BARD1,FAM175B | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | C12orf57,FKBP1A,TYROBP,LY96,RHOC,GPX4,NDUFS8,RRAS,MARCHF2,FAM174C,CLTB,S100A11,CD14,C19orf53,FTL,GUK1,LYL1,HIGD2A,GSTO1,RCN3,RHOG,LST1,SYNGR2,EMP3,ATP6V0B,PFN1,DUSP23,NUDT14,BRI3,TSPO,FAM89B,SSR4,CD63,NOP10,GPX1,TMSB10,SELENOM | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000259768 | ENSG00000004700 | RECQL | ACC,ESCA,GBM,KIRC,KIRP | GBM | | | ENSG00000259768 | ENSG00000054654 | SYNE2 | ACC,CESC,COAD,DLBC,GBM,KIRC,KIRP,SARC,TGCT,THCA | GBM | | | ENSG00000259768 | ENSG00000072571 | HMMR | ACC,DLBC,ESCA,GBM,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000073111 | MCM2 | ACC,CESC,ESCA,GBM,KIRP,LUSC,OV,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000080839 | RBL1 | ACC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LUSC,TGCT,THCA,THYM | GBM | | | ENSG00000259768 | ENSG00000092470 | WDR76 | ACC,DLBC,ESCA,GBM,LAML,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000100479 | POLE2 | ACC,COAD,ESCA,GBM,LAML,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000104738 | MCM4 | ACC,ESCA,GBM,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000106144 | CASP2 | ACC,COAD,DLBC,GBM,KIRP,OV,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000106462 | EZH2 | ACC,COAD,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000123080 | CDKN2C | ACC,CESC,DLBC,GBM,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000123219 | CENPK | ACC,CESC,COAD,ESCA,GBM,LAML,SARC,TGCT,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000129680 | MAP7D3 | ACC,GBM,KIRP,LAML,THCA | GBM | | | ENSG00000259768 | ENSG00000131153 | GINS2 | ACC,CESC,ESCA,GBM,KIRP,LAML,OV,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000132256 | TRIM5 | ACC,GBM,KIRP,LAML,THCA,THYM | GBM | | | ENSG00000259768 | ENSG00000137310 | TCF19 | ACC,CESC,COAD,DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000139350 | NEDD1 | ACC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,READ,SARC,TGCT,THCA,UCEC | GBM | | | ENSG00000259768 | ENSG00000143476 | DTL | ACC,COAD,DLBC,ESCA,GBM,LAML,LUSC,OV,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000145012 | LPP | ACC,DLBC,GBM,KIRC,KIRP | GBM | | | ENSG00000259768 | ENSG00000146918 | NCAPG2 | ACC,COAD,DLBC,ESCA,GBM,KIRP,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000149554 | CHEK1 | ACC,COAD,ESCA,GBM,LAML,LUSC,OV,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000149636 | DSN1 | ACC,CESC,DLBC,GBM,KIRP,LAML,LUSC,OV,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000163507 | CIP2A | ACC,CESC,COAD,DLBC,ESCA,GBM,LAML,READ,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000163918 | RFC4 | ACC,CESC,ESCA,GBM,LAML,READ,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000164818 | DNAAF5 | ACC,ESCA,GBM,KIRP,UCEC | GBM | | | ENSG00000259768 | ENSG00000166508 | MCM7 | ACC,ESCA,GBM,KIRP,OV,THYM | GBM | | | ENSG00000259768 | ENSG00000166801 | FAM111A | ACC,COAD,DLBC,GBM,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000168411 | RFWD3 | ACC,CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LUSC,OV,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000171241 | SHCBP1 | ACC,CESC,COAD,DLBC,ESCA,GBM,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000175792 | RUVBL1 | ACC,ESCA,GBM,KIRP,LAML,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000177084 | POLE | ACC,DLBC,ESCA,GBM,LUSC,OV,READ,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000178202 | POGLUT3 | ACC,COAD,DLBC,GBM,LAML | GBM | | | ENSG00000259768 | ENSG00000178966 | RMI1 | ACC,CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,READ,SARC,TGCT,THCA,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000179051 | RCC2 | ACC,ESCA,GBM,OV,READ,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000184445 | KNTC1 | ACC,CESC,COAD,DLBC,ESCA,GBM,LAML,LUSC,OV,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000186638 | KIF24 | ACC,CESC,COAD,DLBC,GBM,LAML,OV,READ,SARC,TGCT,THYM,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000187741 | FANCA | ACC,CESC,COAD,ESCA,GBM,LAML,LUSC,OV,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000196981 | WDR5B | ACC,CESC,COAD,DLBC,GBM,KIRP,LAML,OV,SARC,TGCT,THCA,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000197056 | ZMYM1 | ACC,COAD,ESCA,GBM,KIRC,LAML,SARC,THCA,UCEC | GBM | | | ENSG00000259768 | ENSG00000198554 | WDHD1 | ACC,CESC,COAD,DLBC,ESCA,GBM,LAML,LUSC,OV,READ,SARC,SKCM,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000011143 | MKS1 | CESC,ESCA,GBM,KIRP,LAML,LUSC,OV,SARC,THCA,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000076003 | MCM6 | CESC,DLBC,ESCA,GBM,LAML,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000102384 | CENPI | CESC,COAD,DLBC,ESCA,GBM,LAML,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000111602 | TIMELESS | CESC,COAD,DLBC,ESCA,GBM,LAML,LUSC,OV,READ,SARC,TGCT,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000112118 | MCM3 | CESC,DLBC,GBM,KIRP,LAML,OV,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000112984 | KIF20A | CESC,DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000113368 | LMNB1 | CESC,COAD,ESCA,GBM,OV,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000117650 | NEK2 | CESC,DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000118655 | DCLRE1B | CESC,COAD,DLBC,ESCA,GBM,READ,SARC,TGCT,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000122952 | ZWINT | CESC,COAD,ESCA,GBM,READ,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000123374 | CDK2 | CESC,COAD,DLBC,ESCA,GBM,KIRP,LAML,LUSC,OV,READ,SARC,TGCT,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000125885 | MCM8 | CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LUSC,OV,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000126787 | DLGAP5 | CESC,ESCA,GBM,LUSC,READ,SARC,SKCM,THYM | GBM | | | ENSG00000259768 | ENSG00000131470 | PSMC3IP | CESC,COAD,DLBC,ESCA,GBM,KIRP,LAML,OV,READ,SARC,TGCT,THYM,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000131747 | TOP2A | CESC,COAD,DLBC,GBM,READ,SARC,SKCM,THYM | GBM | | | ENSG00000259768 | ENSG00000158169 | FANCC | CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,OV,READ,SARC,TGCT,THCA,UCEC | GBM | | | ENSG00000259768 | ENSG00000160298 | C21orf58 | CESC,COAD,DLBC,ESCA,GBM,SARC,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000163482 | STK36 | CESC,DLBC,GBM,LAML,OV,TGCT,THCA | GBM | | | ENSG00000259768 | ENSG00000163808 | KIF15 | CESC,COAD,DLBC,ESCA,GBM,LAML,LUSC,READ,SARC,SKCM,THYM | GBM | | | ENSG00000259768 | ENSG00000164649 | CDCA7L | CESC,COAD,DLBC,ESCA,GBM,KIRC,LAML,OV,READ,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000166881 | NEMP1 | CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LUSC,OV,READ,SARC,TGCT,THCA,THYM,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000168246 | UBTD2 | CESC,DLBC,ESCA,GBM,KIRP,LAML,TGCT,THCA | GBM | | | ENSG00000259768 | ENSG00000169679 | BUB1 | CESC,COAD,ESCA,GBM,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000174989 | FBXW8 | CESC,COAD,DLBC,GBM,KIRC,KIRP,LAML,OV,TGCT,THCA,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000186185 | KIF18B | CESC,DLBC,ESCA,GBM,LUSC,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000196787 | H2AC11 | CESC,ESCA,GBM,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000198056 | PRIM1 | CESC,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LUSC,OV,READ,SARC,SKCM,THYM | GBM | | | ENSG00000259768 | ENSG00000228716 | DHFR | CESC,COAD,DLBC,ESCA,GBM,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000237649 | KIFC1 | CESC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000030066 | NUP160 | COAD,ESCA,GBM,KIRC,KIRP,LAML,READ,SARC,THCA,THYM,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000066279 | ASPM | COAD,DLBC,ESCA,GBM,LUSC,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000068489 | PRR11 | COAD,ESCA,GBM,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000070950 | RAD18 | COAD,DLBC,GBM,KIRC,KIRP,LAML,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000092853 | CLSPN | COAD,DLBC,ESCA,GBM,LUSC,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000118193 | KIF14 | COAD,ESCA,GBM,LUSC,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000121621 | KIF18A | COAD,DLBC,ESCA,GBM,LAML,READ,SARC,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000123473 | STIL | COAD,DLBC,GBM,LAML,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000128513 | POT1 | COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,OV,SARC,TGCT,THCA,THYM,UCS | GBM | | | ENSG00000259768 | ENSG00000138587 | MNS1 | COAD,GBM,LAML,SARC,SKCM,TGCT,THCA,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000138778 | CENPE | COAD,DLBC,ESCA,GBM,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000148773 | MKI67 | COAD,DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000154920 | EME1 | COAD,DLBC,ESCA,GBM,LAML,LUSC,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000159147 | DONSON | COAD,GBM,LAML,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000164244 | PRRC1 | COAD,DLBC,GBM,KIRC,LAML,TGCT,UCEC | GBM | | | ENSG00000259768 | ENSG00000169607 | CKAP2L | COAD,DLBC,ESCA,GBM,LUSC,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000196584 | XRCC2 | COAD,DLBC,ESCA,GBM,LAML,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000197763 | TXNRD3 | COAD,GBM,KIRP,LAML,THCA,UCS | GBM | | | ENSG00000259768 | ENSG00000198826 | ARHGAP11A | COAD,ESCA,GBM,LUSC,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000101346 | POFUT1 | DLBC,GBM,KIRP,TGCT,THCA | GBM | | | ENSG00000259768 | ENSG00000105011 | ASF1B | DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000112039 | FANCE | DLBC,GBM,SARC,TGCT,UCS | GBM | | | ENSG00000259768 | ENSG00000121578 | B4GALT4 | DLBC,GBM,KIRP,THCA,UCS | GBM | | | ENSG00000259768 | ENSG00000122783 | CYREN | DLBC,GBM,KIRP,THCA,THYM | GBM | | | ENSG00000259768 | ENSG00000131269 | ABCB7 | DLBC,GBM,KIRC,LAML,THYM,UCEC | GBM | | | ENSG00000259768 | ENSG00000134690 | CDCA8 | DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000137807 | KIF23 | DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000146833 | TRIM4 | DLBC,GBM,KIRC,KIRP,THCA,UCS | GBM | | | ENSG00000259768 | ENSG00000156802 | ATAD2 | DLBC,ESCA,GBM,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000177917 | ARL6IP6 | DLBC,ESCA,GBM,KIRP,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000184661 | CDCA2 | DLBC,ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000075131 | TIPIN | ESCA,GBM,LAML,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000125319 | HROB | ESCA,GBM,LAML,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000137804 | NUSAP1 | ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000159131 | GART | ESCA,GBM,LAML,READ,SARC,TGCT | GBM | | | ENSG00000259768 | ENSG00000164104 | HMGB2 | ESCA,GBM,READ,SARC,THYM | GBM | | | ENSG00000259768 | ENSG00000198901 | PRC1 | ESCA,GBM,READ,SARC,TGCT,THYM | GBM | | | ENSG00000259768 | ENSG00000047230 | CTPS2 | GBM,KIRC,KIRP,LAML,SARC,THCA | GBM | | | ENSG00000259768 | ENSG00000103852 | TTC23 | GBM,LAML,TGCT,THCA,UCS | GBM | | | ENSG00000259768 | ENSG00000158163 | DZIP1L | GBM,SARC,TGCT,UCEC,UCS | GBM | | | ENSG00000259768 | ENSG00000165895 | ARHGAP42 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | GBM | | | ENSG00000259768 | ENSG00000198876 | DCAF12 | GBM,KIRP,TGCT,THCA,THYM,UCS | GBM | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000166747 | AP1G1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000166747 | AP1G1 | 6 | ACC,GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000110713 | NUP98 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000082898 | XPO1 | 5 | ACC,GBM,KIRC,KIRP,SARC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000147133 | TAF1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000147133 | TAF1 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000095787 | WAC | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000151532 | VTI1A | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000174989 | FBXW8 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000109381 | ELF2 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000109381 | ELF2 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000060749 | QSER1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000060749 | QSER1 | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000166164 | BRD7 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000005889 | ZFX | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000163960 | UBXN7 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000163960 | UBXN7 | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000168769 | TET2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000118058 | KMT2A | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000118058 | KMT2A | 5 | ACC,KIRC,KIRP,SARC,TGCT | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000180376 | CCDC66 | 5 | COAD,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000175595 | ERCC4 | 5 | GBM,KIRC,KIRP,SARC,TGCT | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000081177 | EXD2 | 5 | KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000137601 | NEK1 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000163349 | HIPK1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000163349 | HIPK1 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000163611 | SPICE1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000163611 | SPICE1 | 7 | ACC,GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000124795 | DEK | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000122970 | IFT81 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000122970 | IFT81 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000131149 | GSE1 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000196678 | ERI2 | 5 | COAD,KIRC,SARC,THCA,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000196678 | ERI2 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000196678 | ERI2 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000219481 | NBPF1 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000140386 | SCAPER | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000169375 | SIN3A | 5 | KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000170264 | FAM161A | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000084093 | REST | 5 | COAD,KIRC,SARC,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000084093 | REST | 6 | ACC,GBM,KIRC,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000055917 | PUM2 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000137822 | TUBGCP4 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000137822 | TUBGCP4 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000169379 | ARL13B | 5 | ACC,GBM,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000108021 | TASOR2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000161048 | NAPEPLD | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000196455 | PIK3R4 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000198586 | TLK1 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000107290 | SETX | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000147050 | KDM6A | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000149308 | NPAT | 5 | COAD,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000149308 | NPAT | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000128915 | ICE2 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000118965 | WDR35 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000118965 | WDR35 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000168944 | CEP120 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000100852 | ARHGAP5 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000115464 | USP34 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000181827 | RFX7 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000181827 | RFX7 | 5 | GBM,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000131374 | TBC1D5 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000131374 | TBC1D5 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000157106 | SMG1 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000157106 | SMG1 | 5 | ACC,KIRC,KIRP,SARC,TGCT | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000169967 | MAP3K2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000198646 | NCOA6 | 5 | GBM,KIRC,KIRP,SARC,TGCT | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000072364 | AFF4 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000072364 | AFF4 | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000144445 | KANSL1L | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000174579 | MSL2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000174579 | MSL2 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000064313 | TAF2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000159579 | RSPRY1 | 5 | COAD,KIRC,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000159579 | RSPRY1 | 6 | ACC,GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000141219 | C17orf80 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000174206 | C12orf66 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000105866 | SP4 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000077514 | POLD3 | 5 | ACC,GBM,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000075568 | TMEM131 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000176714 | CCDC121 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000158161 | EYA3 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000107890 | ANKRD26 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000165219 | GAPVD1 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000174373 | RALGAPA1 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000083093 | PALB2 | 5 | ACC,GBM,KIRC,KIRP,SARC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000009954 | BAZ1B | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000009954 | BAZ1B | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000130119 | GNL3L | 5 | ACC,GBM,KIRC,KIRP,SARC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000113300 | CNOT6 | 5 | COAD,KIRC,SARC,THCA,UCEC | | ENSG00000259768 | ENSG00000135457 | TFCP2 | ENSG00000113300 | CNOT6 | 5 | COAD,KIRC,READ,THCA,THYM | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000113300 | CNOT6 | 5 | GBM,KIRC,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000166881 | NEMP1 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000166881 | NEMP1 | 5 | GBM,KIRC,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000114904 | NEK4 | 5 | COAD,KIRC,SARC,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000114904 | NEK4 | 5 | GBM,KIRC,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000136485 | DCAF7 | 5 | GBM,KIRC,KIRP,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000224470 | ATXN1L | 5 | COAD,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000224470 | ATXN1L | 7 | ACC,GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000166037 | CEP57 | 5 | COAD,KIRC,SARC,THCA,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000138081 | FBXO11 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000138081 | FBXO11 | 5 | KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000165895 | ARHGAP42 | 5 | GBM,KIRC,KIRP,SARC,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000149187 | CELF1 | 6 | COAD,KIRC,SARC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000149187 | CELF1 | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000001631 | KRIT1 | 5 | COAD,KIRC,TGCT,THCA,UCEC | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000186660 | ZFP91 | 6 | GBM,KIRC,KIRP,SARC,TGCT,UCEC | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000189079 | ARID2 | 5 | COAD,KIRC,SARC,TGCT,THCA | | ENSG00000259768 | ENSG00000187079 | TEAD1 | ENSG00000090863 | GLG1 | 5 | ACC,GBM,KIRC,KIRP,TGCT | | ENSG00000259768 | ENSG00000126804 | ZBTB1 | ENSG00000168175 | MAPK1IP1L | 5 | COAD,SARC,TGCT,THCA,UCEC |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000259768 | ENST00000563328 | NUDT14 | ENSG00000183828 | ENST00000392568 | -0.3302 | 641 | - | GBM | | ENSG00000259768 | ENST00000563328 | NUDT14 | ENSG00000183828 | ENST00000546553 | -0.2029 | 1582 | - | GBM |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000259768.5 | ENST00000563328.4 | 116 | 1297 | 1644 |
|
