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lncRNA: ENSG00000258844 |
Summary for RP11-259K15.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000258844 | Gene symbol | RP11-259K15.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-259K15.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000258844 | 1.841594e+02 | 1.945516e+00 | 1.603999e-01 | 1.212916e+01 | 7.400000e-34 | 2.810000e-32 | UP | THCA |
| ENSG00000258844 | 1.582743e+02 | -1.024838e+00 | 2.674496e-01 | -3.831893e+00 | 1.271610e-04 | 3.112530e-04 | DOWN | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000258844 | -3.306967e-01 | 2.024301e-16 | LUAD | 3.906354e-15 |
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lncRNA-Protein interaction for RP11-259K15.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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