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lncRNA: ENSG00000258675 |
Summary for LINC02308 |
Gene summary |
Gene information | Ensembl ID | ENSG00000258675 | Gene symbol | LINC02308 |
Gene name | long intergenic non-protein coding RNA 2308 | |
HGNC | 53227 | |
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | RP11-299L17.3|14q31.1|LINC02308 | |
UniProtAcc |
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Structure and expression level for LINC02308 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000258675 | 6.503904e+01 | 6.313189e+00 | 9.314072e-01 | 6.778119e+00 | 1.220000e-11 | 2.910000e-10 | UP | GBM |
ENSG00000258675 | 8.503090e+01 | 3.960379e+00 | 5.333555e-01 | 7.425403e+00 | 1.120000e-13 | 1.320000e-12 | UP | KIRP |
ENSG00000258675 | 3.190576e+01 | 7.319885e+00 | 2.122654e+00 | 3.448459e+00 | 5.637960e-04 | 7.508444e-03 | UP | PCPG |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC02308 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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