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lncRNA: ENSG00000258602 |
Summary for LINC01629 |
Gene summary |
Gene information | Ensembl ID | ENSG00000258602 | Gene symbol | LINC01629 |
Gene name | long intergenic non-protein coding RNA 1629 | |
HGNC | 52260 | |
Entrez ID | 105370578 | |
Gene type | lincRNA | |
Synonyms | RP11-7F17.7|14q24.3|LINC01629 | |
UniProtAcc |
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Structure and expression level for LINC01629 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000258602 | 3.621688e+01 | 2.123239e+00 | 4.130425e-01 | 5.140486e+00 | 2.740000e-07 | 1.360000e-06 | UP | HNSC |
ENSG00000258602 | 3.418537e+01 | 4.585832e+00 | 4.156799e-01 | 1.103212e+01 | 2.670000e-28 | 2.640000e-27 | UP | LUSC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01629 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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