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lncRNA: ENSG00000257543 |
Summary for RP11-321F8.4 |
Gene summary |
Gene information | Ensembl ID | ENSG00000257543 | Gene symbol | RP11-321F8.4 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-321F8.4 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000257543 | 1.956776e+01 | 1.768853e+00 | 1.790170e-01 | 9.880921e+00 | 5.040000e-23 | 3.830000e-22 | UP | LUSC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000257543 | -3.534129e-01 | 6.805661e-04 | KICH | 9.725821e-04 |
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lncRNA-Protein interaction for RP11-321F8.4 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000257543 | ENST00000547360 | RP11-321F8.4 | ENSG00000099326 | MZF1 | 74.17 | 91.2838 | P28698 | TF | NA |
ENSG00000257543 | ENST00000547360 | RP11-321F8.4 | ENSG00000166432 | ZMAT1 | 34.5 | 90.547 | Q5H9K5 | TF | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000257543 | ENST00000547360 | RP11-321F8.4 | ENSG00000004534 | RBM6 | 87.08 | 93.2211 | P78332 | RBP | NA |
ENSG00000257543 | ENST00000547360 | RP11-321F8.4 | ENSG00000176102 | CSTF3 | 56.95 | 91.0194 | Q12996 | RBP | NA |
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