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lncRNA: ENSG00000256139 |
Summary for RP11-968O1.5 |
Gene summary |
Gene information | Ensembl ID | ENSG00000256139 | Gene symbol | RP11-968O1.5 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | sense_overlapping | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-968O1.5 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000256139 | 6.600744e+01 | -1.191016e+00 | 1.247226e-01 | -9.549316e+00 | 1.310000e-21 | 8.590000e-21 | DOWN | KIRC |
ENSG00000256139 | 5.813662e+01 | -1.249657e+00 | 2.071033e-01 | -6.033981e+00 | 1.600000e-09 | 1.820000e-08 | DOWN | STAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000256139 | -3.836014e-01 | 9.484214e-23 | KIRC | 1.169287e-21 |
ENSG00000256139 | -3.244336e-01 | 1.392017e-08 | KIRP | 1.149354e-07 |
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lncRNA-Protein interaction for RP11-968O1.5 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000256139 | ENST00000541704 | RP11-968O1.5 | ENSG00000118058 | KMT2A | 48.9 | 92.4047 | Q03164 | TF,Epi | NA |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000256139 | ENST00000541704 | RP11-968O1.5 | ENSG00000118058 | KMT2A | 48.9 | 92.4099 | Q03164 | TF,Epi | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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