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lncRNA: ENSG00000254854 |
Summary for NECTIN1-DT |
Gene summary |
Gene information | Ensembl ID | ENSG00000254854 | Gene symbol | NECTIN1-DT |
Gene name | NECTIN1 divergent transcript | |
HGNC | 55513 | |
Entrez ID | 102724301 | |
Gene type | antisense | |
Synonyms | 11q23.3|NECTIN1-DT|CTD-2523D13.2 | |
UniProtAcc |
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Structure and expression level for NECTIN1-DT |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000254854 | 2.802949e+01 | 1.077968e+00 | 2.944169e-01 | 3.661366e+00 | 2.508740e-04 | 1.163711e-03 | UP | BLCA |
ENSG00000254854 | 3.867285e+01 | 1.024698e+00 | 1.786106e-01 | 5.737052e+00 | 9.630000e-09 | 5.860000e-08 | UP | HNSC |
ENSG00000254854 | 6.308997e+01 | 4.342887e+00 | 1.030707e+00 | 4.213503e+00 | 2.510000e-05 | 5.708910e-04 | UP | PCPG |
ENSG00000254854 | 7.482843e+01 | 4.651948e+00 | 2.167075e-01 | 2.146648e+01 | 3.200000e-102 | 3.670000e-100 | UP | LUSC |
ENSG00000254854 | 3.266722e+01 | 1.475629e+00 | 1.076483e-01 | 1.370788e+01 | 9.110000e-43 | 1.500000e-41 | UP | BRCA |
ENSG00000254854 | 2.238845e+01 | 1.074490e+00 | 1.933169e-01 | 5.558177e+00 | 2.730000e-08 | 1.250000e-07 | UP | COAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for NECTIN1-DT |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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