|
||||||
|
lncRNA: ENSG00000253931 |
Summary for RP11-909N17.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000253931 | Gene symbol | RP11-909N17.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
Top |
Structure and expression level for RP11-909N17.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000253931 | 2.926524e+01 | 5.129523e+00 | 3.680755e-01 | 1.393606e+01 | 3.820000e-44 | 7.440000e-43 | UP | LUSC |
| ENSG00000253931 | 1.253806e+01 | 5.727297e+00 | 5.627716e-01 | 1.017695e+01 | 2.510000e-24 | 7.150000e-23 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
Top |
lncRNA-Protein interaction for RP11-909N17.2 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
