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lncRNA: ENSG00000253361 |
Summary for RP11-675F6.3 |
Gene summary |
Gene information | Ensembl ID | ENSG00000253361 | Gene symbol | RP11-675F6.3 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-675F6.3 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000253361 | 4.048132e+01 | 4.595860e+00 | 8.640818e-01 | 5.318779e+00 | 1.040000e-07 | 8.270000e-07 | UP | CHOL |
ENSG00000253361 | 1.510777e+01 | 2.987796e+00 | 3.530260e-01 | 8.463386e+00 | 2.600000e-17 | 3.360000e-16 | UP | UCEC |
ENSG00000253361 | 2.597391e+01 | 3.471164e+00 | 1.013092e+00 | 3.426307e+00 | 6.118480e-04 | 8.016697e-03 | UP | PCPG |
ENSG00000253361 | 6.367458e+01 | 1.711768e+00 | 1.964927e-01 | 8.711610e+00 | 3.000000e-18 | 1.780000e-17 | UP | BRCA |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000253361 | 4.976327e-01 | 5.050106e-04 | CHOL | 9.981857e-04 |
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lncRNA-Protein interaction for RP11-675F6.3 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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