 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | RDX,DLGAP5,SPAG9,CPLANE1,PUM1,TINF2,ERI2,USP22,GLYR1,NUP155,ANAPC1,WDR89,ZRANB1,LIG3,IPP,C1orf56,MFAP1,TTC31,CHM,SUGP2,NCAPD2,RHNO1,TXNDC16,DMTF1,RFC1,ARL2BP,TMEM184C,FAM193A,NSD3,UNKL,HLTF,SENP1,ZNF24,APH1A,MTSS2,FAM120AOS,UBE4A,GDAP1,ZBED4,SF3B3,WDCP,PIGX,VPS39,GMFB,RHOT1,WDR5B,KLHL28,NOP9,TIMELESS,RSF1,SMARCC2,MYO9A,STRBP,AMN1,KPNB1,USP30,DEK,GMPR2,RPAP1,TTC7B,SETD2,RNF40,XXYLT1,BRPF1,CCNK,KLHL42,SIN3A,CREB1,GPRASP2,PPP1R3E,KDM5A,CAPN7,FBXO34,STRN3,CHAF1B,ARCN1,HSPA13,PJA1,RCCD1,ZFP1,VPS35L,GZF1,NCBP1,RGP1,ASH1L,SMC2,TUT4,PSIP1,FAN1,RIC8B,UBE3A,CPSF7,TOP2B,MOCS3,TRIM37,MORC2,THOC2,BACE1,AGBL5,NASP,GTF3C2,PRC1,AKT1,ATP9A,SEPTIN10,RBBP4,RFX7,CEP19,MSH6,HCFC2,FOXJ3,TBC1D9B,ADD2,SLC4A1AP,MBD5,CBX1,MEX3B,NCOA6,TTC21B,NPAT,ANKRD11,C4orf46,ARID1A,RAB3GAP2,PNMA8A,NEMP1,SETD5,ZFP62,MIS18BP1,TM9SF1,GON4L,CERS6,CEP104,RACGAP1,CASK,ZBED8,CHD9,ZNF45,YTHDC1,TOPBP1,COQ6,DONSON,TMEM185B,FGD1,POGLUT3,TFCP2,CAMSAP1,LRRC37B,INTS2,VPS26C,UBE2O,SMC1A,MYH10,TSSK6,RNF111,TNKS,FIGNL1,NR2C2,PNMA1,SIX5,TASOR,TAF1A,MOAP1,SMARCAD1,GTSE1,KHNYN,ZNF14,SCRN3,STAG2,PKN2,CHEK1,BRD2,SLC30A6,XPO1,PAQR4,NCAPG2,IPO9,FITM2,ATG2B,HUWE1,MTMR4,ATXN2L,SP3,DNASE1,TNPO2,SDE2,KLHL23,DVL2,DDX42,WDR35,CCNT1,HIPK1,TTC3,CEP192,ARHGEF11,LYSMD1,AHDC1,KAT14,ACACA,PALB2,PEX10,BUD13,TSR1,RALBP1,ZFP3,MARCHF6,BRD3,RFFL,EIF4ENIF1,CUL3,LTN1,ZMYM1,RNF214,IQCC,ARHGEF9,ENTPD5,FAM172A,UBN1,USP27X,SNX19,RBBP7,FANCL,MED14,CAND1,SMG7,CKAP2L,DCLRE1B,CSNK1G1,CEP57,MIB1,CEP68,BBOF1,FAM168B,KLHL15,ARMCX4,AZI2,HAUS2,DARS2,MAZ,VEZF1,GSK3B,RTL6,ZNF70,CLASP1,PIGH,ICE2,SMCR8,ASTE1,KDM5C,BRCC3,DDX24,ADGRA3,DDX55,COG8,ATL1,CASP2,DCAF7,GID8,ZXDA,KIF4A,UBR1,NUMA1,PHF12,CHD8,SESN3,LANCL1,RPA1,KIAA1143,C2CD3,UBR4,UNG,TMED8,RELL1,AP5M1,BCOR,TOP3A,SMG1,MPP2,OCRL,PARS2,FEN1,PHC1,RAI1,XIAP,ATP7A,MED6,SLC39A9,MSH3,UTP14C,NUP210,ZCCHC14,SRP54,NEK9,GGNBP2,EP400,CPLANE2,LIN54,NOMO2,KIAA0586,RTF1,C17orf75,LRIG2,PARP2,CDH24,CABLES2,SBK1,PATZ1,LCMT2,PRRT3,IWS1,SLX4,FOXN3,PHF13,SP2,MECP2,SV2A,ANGEL1,SMYD4,ZFYVE1,UBAP2L,RPRD1B,BRF1,ACIN1,ZNF41,ZC3H8,SART3,MAU2,TRAPPC6B,DZIP3,RAB2B,TTC8,FOXM1,MBLAC2,KNOP1,HEATR5A,ZNF48,KCTD18,TADA2A,CEP85,GTF2A1,WDR76,NUBPL,SYNRG,BOD1L1,TOX4,BHLHB9,CENPO,CHD2,RNF31,TRAPPC13,NVL,BAG5,METTL14,TUBGCP3,NSUN2,ZNF720,PIGO,HEMK1,NCKAP1,CDCA8,UPF3B,HERC1,BTBD7,BCL9L,RAB11FIP3,POLR1A,C2orf68,MRE11,ARHGAP32,YPEL1,RAD50,SLC23A2,TTBK2,CASKIN2,TP53BP1,TMLHE,ARID4A,BTBD6,LRBA,FAM171A2,VPS54,CCDC142,SMAD4,AASDHPPT,PAXIP1,KIF18B,TTC37,TXNRD3,SYNE2,CBX5,WASF2,MGAT2,EPM2AIP1,FKBP3,CSTF2,CCNA2,HECTD4,YY1AP1,EXOC7,ANKFY1,KHDC4,TPR,NADK2,MIDEAS,B3GNT9,XPO5,SMARCA1,DDX23,MCM4,TAF6,NUCKS1,ATAD2B,CUL4B,DET1,NCOA2,ABCB10,MED17,DNMT1,EXO5,PLCG1,ESCO1,AFG3L2,CEP63,RALGAPA1,PPP2R5D,CCDC85C,CDC42BPA,ANGEL2,TGFBRAP1,FAM214A,N4BP2,MED13L,RBM23,POLH,E2F8,CEP250,ARID2,SMARCAL1,UBTF,SEC24B,SMG6,TTC5,FADS1,NEK4,MKS1,TAF4,NUP153,YEATS4,TTI1,DBR1,MCM2,PIP4P1,SPIN3,DHFR,SLX4IP,HEATR1,IRF2BPL,GTF3C3,MIS18A,PBRM1,POFUT1,URB2,TET3,DCAKD,XPC,PDPK1,TCAF1,PRR14L,PPM1A,BARD1,TENT4A,PPP4R3B,TMSB15A,INCA1,UBXN7,NUSAP1,MTMR12,SON,N6AMT1,KANSL3,USP11,DHX57,AADAT,ALG12,SIKE1,SCAF4,PHF8,MPHOSPH9,CHST14,TDP1,POM121C,HECTD1,RRM1,INTS7,EDC4,NDE1,RNF123,NFRKB,ZNF91,CHD6,ZFP91,GNL3L,RAD1,CTPS2,CNOT1,U2AF2,CSTF3,ALDH6A1,TIGD6,PDK2,C5orf22,PURB,TUBGCP5,RBM25,RO60,TBCK,ACBD3,BBS10,ZFP30,MLH3,SP4,SMARCC1,SETD6,MBIP,KANSL1L,TTC30A,UBR5,PRIM1,CDK4,CDC23,PRPF39,HDHD2,KIAA0753,TRIM45,DCAF17,HEATR5B,CHD4,PJA2,SRRM2,SETD3,SNW1,ZC3H13,MTHFR,MAP4K5,GORAB,ASF1B,HEATR6,UBR3,HEXIM2,CENPC,RBM41,PROSER3,HERC2,TUBGCP4,TCF19,GMCL1,USP28,USP19,ASB7,TMEM201,PRRC2A,POMT2,POLK,SOGA1,NCOR1,TUBA1B,CELF1,SCMH1,CCDC121,NFXL1,HLCS,QRICH1,HOMEZ,ATAD2,BAZ1B,APEX1,VIPAS39,METTL6,SPOP,PRUNE1,PPP4R3A,HCN3,FCF1,KANSL1,ZNF3,FAM161B,STAU1,ZMYM3,DNMT3A,IARS2,BMPR2,SNRNP200,CDK2,CAD,PARP1,ERCC3,RIOX1,RUSF1,FAM161A,RBBP5,USP32,POLE,MYO18A,PLK1,PPP2R5E,HELZ,GTF3C1,ELF2,CRAMP1,ZNF43,WDR6,PNN,TMEM25,DSN1,UBE2V1,CHAF1A,ARHGAP5,BBS4,DAG1,PMS2,TMEM131,AREL1,LZIC,USP16,ALKBH1,OPRL1,KMT2A,REV1,KLHL8,DYNC1LI2,APPL1,SOS1,WBP1,PARP16,HCFC1,MED1,ADAL,USP51,PRMT5,CDC42BPB,DSTYK,DNAAF2,USP34,GPATCH8,MDC1,EXOC5,EIF5,STAG1,RFX5,CKAP5,ZNF2,GXYLT1,ZXDC,ESF1,NSRP1,INTS3,PDS5A,LNPK,AP4S1,AASDH,ATRX,GEMIN5,FOXRED2,MUTYH,RBM28,HJURP,CSE1L,SF3B1,ZBTB5,CINP,CKAP2,HSPA1L,TTC28,ZFYVE26,CEP350,RRP1B,KMT2E,PTCD2,DDX59,BCL2L2,ZC3H4,MORC3,PACS2,SEMA4F,RBM4,ANKRD52,KLHL18,USP24,SOS2,TOGARAM1,FAM76B,SUPT16H,POGZ,CCDC43,USP7,TRIM23,AKAP10,RBMX,RBM4B,TECPR2,PCNT,RBM14,ADNP,NCOA5,TMEM143,ORC4,MBD1,TCEANC2,ARID1B,PIP4K2B,DCAF5,NF1,ANKRD40,PRIMPOL,ERC1,GID4,COPA,WDHD1,ANKRD9,TCF20,SPIN4,GEMIN4,THAP9,VPS26B,SMPD4,TRIM33,TIRAP,HMGB2,WDR20,SCAPER,KIDINS220,DCAF1,CSTF1,PUS7,HAUS5,KLHL12,AQR,MCM6,FMR1,RAD52,EPB41,CTDSPL2,MARF1,INO80,CEP290,SDR39U1,TRIP11,NEK1,GTF2E1,MCM8,LIN52,CDAN1,EXOC6B,COIL,SLC24A1,HAUS4,HTRA2,PFAS,CPSF2,VPS52,CBLN3,USP21,ALS2,CNNM3,NSD2,LRRC58,FBXO11,ATP6V1E2,LPIN2,CCDC93,DLAT,SNX1,SALL2,PATL1,BRPF3,SAP130,UBAP2,MCM3AP,HP1BP3,ZW10,STRADA,ZFX,RAB3D,RMND5A,NAF1,USO1,DIDO1,SGPP1,APPBP2,LMBRD2,FKTN,KANK2,ARNT,ALG9,STEEP1,TOP2A,C1orf109,CREBBP,CHURC1,PSMC3IP,PIKFYVE,CCNI,PUM2,RAB3GAP1,DNAJC11,SFMBT1,DHX36,ZFP28,ZNF17,TRMT61B,SRCAP,SDAD1,SLC30A9,RNF169,CEP170,CCP110,ADCY3,KIF15,WDR26,PTPRA,NUDT17,C17orf80,CLSPN,PRPF40B,KATNIP,ASXL1,NGRN,SPG11,FBXO42,DCAF11,PDCD7,NCAPD3,TBC1D5,PIP5K1A,ATF2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | KIDINS220,PCNT,TRIM33,ERC1,MCM6,TMEM164,DCAF7,UNG,ATXN1L,GIGYF2,SEC24B,BRCC3,DNAAF2,DNASE1,IARS2,KDM5A,CCNT1,SOCS5,MECP2,SMARCC2,NCAPD3,KIAA1143,VPRBP,CBFA2T2,KANK2,WDR60,ZFYVE9,COIL,HAUS5,SLC23A2,UBAP2L,YEATS4,DGCR8,MTMR12,ZNF3,TBC1D5,KLHL28,SDAD1,RAD52,METTL6,LRRC41,TUBGCP4,GORAB,FAN1,ITCH,TRIM23,SMG1,ZNF70,NCOA6,FAM120C,CDK12,FAM171A2,ABCB10,CERS6,ANKRD6,FITM2,PTPRF,RPAP1,ELF2,SMARCA1,RALGAPB,DLST,GNA11,SENP2,GEMIN5,CASP8AP2,HERC2,HEMK1,IRF2BPL,GTF3C2,HAUS2,E2F8,C1orf56,CBL,KANSL1L,DIP2B,CHD9,USP32,PUS7,CEP290,EP300,MAZ,MBLAC2,CTPS2,PARP2,SLC4A1AP,RAB3GAP1,SPDL1,ZNF14,FOXM1,TIGD6,LDOC1L,PRPF40B,BCL9,COQ6,SETD6,UBXN7,ZNF720,HOMEZ,C14orf169,PPP2R5C,GEMIN4,PMS2,AP5M1,NCOA2,RIF1,CSE1L,PTPRA,EXOC6B,TCAF1,ZC3H6,STAU1,FAM179B,ELMSAN1,TCEAL2,C2orf68,KIF2A,ZC3H11A,SDR39U1,KAT5,C14orf79,PHACTR4,DLGAP5,PTPN9,TUBGCP3,ACBD3,ANKRD52,GTF3C1,DBR1,TBC1D9B,ERCC4,TMEM131,HEATR6,TOPBP1,EXD2,LRRC57,NIPA2,PFAS,C17orf75,U2AF2,YEATS2,USP28,KLHL8,ZNF45,KIAA0907,XIAP,STRADA,CTDSPL2,TRAPPC10,MPHOSPH9,DDX46,MAU2,DNMT1,CLASP1,NFX1,ZFP30,N4BP2,EXOC5,CUL3,HCN3,SIKE1,COPA,WNK1,SUZ12,NUMA1,FBXO42,MOAP1,ELAC1,TAF1A,CAD,LZIC,AREL1,RALGAPA1,BAZ1B,GSK3B,TIMELESS,NEU3,SNX1,MAGEF1,ANGEL2,CDC23,EXO5,CDAN1,ZNF48,TGFBRAP1,UBR5,SBK1,TM9SF4,WDR35,GTF2I,BRD3,SEMA4F,LPIN2,KDM4A,ARHGEF9,EML1,PRRT3,MARK1,BRPF3,MED1,ZC3H4,CHD8,TINF2,TFCP2,RHNO1,TERF1,ATAD2B,CPSF7,FAM161B,PATL1,KIF15,CLPX,SLX4,SPIN4,FKTN,PRMT6,ERCC3,N6AMT1,PRRC2B,ZFP3,CASK,PRIM1,DHX9,FOXK2,ZCCHC11,ENTPD5,KIAA0556,MCM3AP,RBM4,IPP,NEK4 | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | RAB4B,FKBP1A,TYROBP,LY96,FAM174C,GMFG,NDUFA13,ATP5F1D,COX6B1,TMEM208,RHOG,CYBA,CIB1,ZBTB8OS,CORO7,RABAC1,TMEM219,PRR13,MVP,ATP6V0B,PFN1,NDUFB7,RPS19BP1,ENKD1,VKORC1,ARPC4,NFKBIB,PSMB3,VASP,CD63,NDUFA3,SERF2,OAZ1,GPX1,TMSB10,EFHD2,COX4I1 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000251602 | ENSG00000048028 | USP28 | GBM,LUAD,LUSC,MESO,PCPG,SARC,THYM,UCS | LUSC | | | ENSG00000251602 | ENSG00000073111 | MCM2 | GBM,KICH,LUAD,LUSC,PCPG,PRAD,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000076003 | MCM6 | GBM,KICH,LUAD,OV,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000076248 | UNG | GBM,LUAD,LUSC,PRAD,UCEC | LUSC | | | ENSG00000251602 | ENSG00000084774 | CAD | GBM,LUSC,PCPG,PRAD,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000092470 | WDR76 | GBM,LUAD,PCPG,PRAD,SARC,TGCT,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000092853 | CLSPN | GBM,LUAD,SARC,THYM,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000108468 | CBX1 | GBM,KICH,LGG,LUAD,LUSC,MESO,PCPG,PRAD,SARC,THYM,UCEC | LUSC | | | ENSG00000251602 | ENSG00000111602 | TIMELESS | GBM,KICH,LUAD,LUSC,PCPG,PRAD,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000116062 | MSH6 | GBM,LUAD,LUSC,MESO,PCPG,PRAD,SARC,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000126001 | CEP250 | GBM,KICH,LAML,LUAD,LUSC,PCPG,PRAD,SARC,TGCT,UCS | LUSC | | | ENSG00000251602 | ENSG00000131470 | PSMC3IP | GBM,LUAD,LUSC,PCPG,PRAD,SARC,UCEC | LUSC | | | ENSG00000251602 | ENSG00000134253 | TRIM45 | GBM,KICH,LAML,LUSC,TGCT,THYM,UCS | LUSC | | | ENSG00000251602 | ENSG00000139880 | CDH24 | GBM,LUAD,SARC,TGCT,UCEC | LUAD | | | ENSG00000251602 | ENSG00000149554 | CHEK1 | GBM,KICH,LUAD,LUSC,SARC,UCEC | LUAD,LUSC | | | ENSG00000251602 | ENSG00000149636 | DSN1 | GBM,KICH,LUAD,LUSC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000149679 | CABLES2 | GBM,KICH,LAML,LUAD,LUSC,MESO,PRAD,SARC,TGCT,THYM,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000159147 | DONSON | GBM,KICH,LUAD,SARC,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000159259 | CHAF1B | GBM,LUAD,OV,SARC,UCEC | LUAD | | | ENSG00000251602 | ENSG00000162073 | PAQR4 | GBM,LUAD,PCPG,SARC,TGCT,UCS | LUAD | | | ENSG00000251602 | ENSG00000163781 | TOPBP1 | GBM,KICH,LGG,LUAD,LUSC,MESO,PCPG,PRAD,SARC,THYM,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000170264 | FAM161A | GBM,LUAD,LUSC,PCPG,SARC,TGCT,THYM,UCS | LUSC | | | ENSG00000251602 | ENSG00000177084 | POLE | GBM,KICH,LUSC,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000198554 | WDHD1 | GBM,LUAD,LUSC,OV,SARC,THYM,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000005156 | LIG3 | KICH,LUAD,LUSC,MESO,PRAD,SARC,UCS | LUSC | | | ENSG00000251602 | ENSG00000042088 | TDP1 | KICH,LGG,LUAD,LUSC,OV,PRAD,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000100350 | FOXRED2 | KICH,LGG,LUAD,LUSC,MESO,PCPG,PRAD,TGCT,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000102302 | FGD1 | KICH,LUAD,LUSC,PCPG,PRAD,THYM | LUSC | | | ENSG00000251602 | ENSG00000105011 | ASF1B | KICH,LUAD,PRAD,SARC,UCEC | LUAD | | | ENSG00000251602 | ENSG00000108852 | MPP2 | KICH,LUSC,PCPG,SARC,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000124207 | CSE1L | KICH,LUAD,LUSC,PCPG,PRAD,UCS | LUSC | | | ENSG00000251602 | ENSG00000125885 | MCM8 | KICH,LUAD,LUSC,PCPG,PRAD,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000131747 | TOP2A | KICH,LUAD,LUSC,PCPG,PRAD,SARC,TGCT,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000134690 | CDCA8 | KICH,LUAD,PRAD,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000136108 | CKAP2 | KICH,LUAD,PCPG,PRAD,SARC,TGCT,THYM,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000137804 | NUSAP1 | KICH,LUAD,PRAD,SARC,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000159055 | MIS18A | KICH,LUAD,PCPG,PRAD,UCEC | LUAD | | | ENSG00000251602 | ENSG00000161800 | RACGAP1 | KICH,LUAD,PCPG,PRAD,SARC,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000167670 | CHAF1A | KICH,LUAD,PCPG,SARC,UCEC | LUAD | | | ENSG00000251602 | ENSG00000171792 | RHNO1 | KICH,LUAD,LUSC,PCPG,SARC,UCEC | LUSC | | | ENSG00000251602 | ENSG00000188322 | SBK1 | KICH,LUAD,PCPG,PRAD,SARC,TGCT | LUAD | | | ENSG00000251602 | ENSG00000188807 | TMEM201 | KICH,LAML,LUAD,LUSC,PRAD,UCS | LUSC | | | ENSG00000251602 | ENSG00000198056 | PRIM1 | KICH,LGG,LUAD,LUSC,OV,PCPG,PRAD,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000198901 | PRC1 | KICH,LUAD,PCPG,PRAD,SARC,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000250565 | ATP6V1E2 | KICH,LGG,LUSC,MESO,PCPG,PRAD,SARC | LUSC | | | ENSG00000251602 | ENSG00000119772 | DNMT3A | LAML,LUAD,LUSC,MESO,PRAD | LUSC | | | ENSG00000251602 | ENSG00000138092 | CENPO | LAML,LUAD,LUSC,PCPG,PRAD,TGCT,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000175931 | UBE2O | LAML,LGG,LUAD,LUSC,MESO,PCPG,PRAD,SARC,UCEC | LUSC | | | ENSG00000251602 | ENSG00000051825 | MPHOSPH9 | LGG,LUSC,MESO,PCPG,PRAD,THYM,UCS | LUSC | | | ENSG00000251602 | ENSG00000075340 | ADD2 | LGG,LUSC,MESO,PCPG,UCS | LUSC | | | ENSG00000251602 | ENSG00000161682 | FAM171A2 | LGG,LUSC,MESO,PCPG,TGCT,UCS | LUSC | | | ENSG00000251602 | ENSG00000075218 | GTSE1 | LUAD,LUSC,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000103550 | KNOP1 | LUAD,LUSC,MESO,PRAD,UCEC | LUAD,LUSC | | | ENSG00000251602 | ENSG00000117593 | DARS2 | LUAD,LUSC,MESO,PCPG,PRAD,UCEC | LUAD,LUSC | | | ENSG00000251602 | ENSG00000126787 | DLGAP5 | LUAD,LUSC,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000130695 | CEP85 | LUAD,PCPG,PRAD,SARC,THYM,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000163026 | WDCP | LUAD,LUSC,PCPG,PRAD,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000163808 | KIF15 | LUAD,LUSC,SARC,TGCT,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000169607 | CKAP2L | LUAD,SARC,TGCT,UCEC,UCS | LUAD | | | ENSG00000251602 | ENSG00000186185 | KIF18B | LUAD,LUSC,SARC,UCEC,UCS | LUAD,LUSC | | | ENSG00000251602 | ENSG00000123485 | HJURP | LUSC,PRAD,SARC,UCEC,UCS | LUSC | | | ENSG00000251602 | ENSG00000166881 | NEMP1 | LUSC,MESO,PCPG,PRAD,THYM,UCEC,UCS | LUSC | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000251602.5 | ENST00000551271.4 | 86 | 1586 | 1846 | | ENSG00000251602.5 | ENST00000504332.1 | 132 | 1175 | 777 |
|
