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lncRNA: ENSG00000251381 |
Summary for LINC00958 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000251381 | Gene symbol | LINC00958 |
| Gene name | long intergenic non-protein coding RNA 958 | |
| HGNC | 48671 | |
| Entrez ID | 100506305 | |
| Gene type | lincRNA | |
| Synonyms | LINC00958|11p15.3 | |
| UniProtAcc |
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Structure and expression level for LINC00958 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000251381 | 4.838552e+02 | 1.182970e+00 | 1.935473e-01 | 6.112045e+00 | 9.840000e-10 | 5.330000e-09 | UP | THCA |
| ENSG00000251381 | 1.000976e+03 | 4.626182e+00 | 8.270045e-01 | 5.593902e+00 | 2.220000e-08 | 8.850000e-07 | UP | CESC |
| ENSG00000251381 | 1.735591e+03 | 1.623424e+00 | 1.956199e-01 | 8.298870e+00 | 1.050000e-16 | 1.590000e-15 | UP | HNSC |
| ENSG00000251381 | 4.635956e+02 | 2.248569e+00 | 1.847361e-01 | 1.217179e+01 | 4.390000e-34 | 1.860000e-32 | UP | UCEC |
| ENSG00000251381 | 1.063754e+03 | 5.736605e+00 | 2.574838e-01 | 2.227948e+01 | 5.840000e-110 | 7.920000e-108 | UP | LUSC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000251381 | 3.338608e-01 | 9.472839e-17 | UCEC | 1.474310e-15 |
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lncRNA-Protein interaction for LINC00958 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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