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lncRNA: ENSG00000251169 |
Summary for LINC01843 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000251169 | Gene symbol | LINC01843 |
| Gene name | long intergenic non-protein coding RNA 1843 | |
| HGNC | 52659 | |
| Entrez ID | 101927934 | |
| Gene type | lincRNA | |
| Synonyms | AC005355.2|05q31.1|LINC01843 | |
| UniProtAcc |
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Structure and expression level for LINC01843 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000251169 | 1.687057e+02 | 1.900485e+00 | 1.523130e-01 | 1.247750e+01 | 9.900000e-36 | 1.330000e-34 | UP | KIRC |
| ENSG00000251169 | 5.330404e+01 | 2.215811e+00 | 2.433894e-01 | 9.103977e+00 | 8.710000e-20 | 8.670000e-19 | UP | LUAD |
| ENSG00000251169 | 1.620173e+02 | 1.150776e+00 | 2.194153e-01 | 5.244741e+00 | 1.570000e-07 | 6.760000e-07 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000251169 | 3.216908e-01 | 3.117085e-02 | CHOL | 3.256482e-02 |
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lncRNA-Protein interaction for LINC01843 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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