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lncRNA: ENSG00000250988

Summary for SNHG21

Gene summary

Gene information	Ensembl ID	ENSG00000250988
	Gene symbol	SNHG21
	Gene name	small nucleolar RNA host gene 21
	HGNC	50284
	Entrez ID	100505616
	Gene type	antisense
	Synonyms	SNHG21\|15q25.2
	UniProtAcc

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Structure and expression level for SNHG21

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000250988	8.715708e+01	1.245751e+00	1.173577e-01	1.061500e+01	2.540000e-26	2.270000e-25	UP	LUSC

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID

Correlation

P-value

Cancer Type

Adjc.p-value

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lncRNA-Protein interaction for SNHG21

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000181555	SETD2	73.02	96.6012	Q9BYW2	Epi	NA
ENSG00000250988	ENST00000559366	SNHG21	ENSG00000181555	SETD2	73.02	95.7182	Q9BYW2	Epi	NA
ENSG00000250988	ENST00000561107	SNHG21	ENSG00000181555	SETD2	68.85	93.8597	Q9BYW2	Epi	NA
ENSG00000250988	ENST00000544685	SNHG21	ENSG00000181555	SETD2	39.69	92.2788	Q9BYW2	Epi	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000154832	CXXC1	40.51	91.5475	Q9P0U4	TF,Epi	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000280789	PAGR1	7.73	90.5302	Q9BTK6	Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000154832	CXXC1	40.51	91.3061	Q9P0U4	TF,Epi	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000198040	ZNF84	36.01	90.0598	P51523	TF	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000168661	ZNF30	12.23	90.7207	P17039	TF	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000256223	ZNF10	11.49	91.2071	P21506	TF	NA
ENSG00000250988	ENST00000559366	SNHG21	ENSG00000256223	ZNF10	11.49	90.3882	P21506	TF	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000144161	ZC3H8	5.72	90.0228	Q8N5P1	TF,RBP	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000137776	SLTM	61.56	93.5484	Q9NWH9	RBP	eCLIP
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000139746	RBM26	60.2	93.9704	Q5T8P6	RBP	NA
ENSG00000250988	ENST00000559366	SNHG21	ENSG00000139746	RBM26	60.2	94.2176	Q5T8P6	RBP	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000124193	SRSF6	18.33	93.0209	Q13247	RBP	NA
ENSG00000250988	ENST00000558174	SNHG21	ENSG00000144161	ZC3H8	5.72	90.3413	Q8N5P1	TF,RBP	NA
ENSG00000250988	ENST00000561107	SNHG21	ENSG00000139746	RBM26	54.15	91.7481	Q5T8P6	RBP	NA
ENSG00000250988	ENST00000544685	SNHG21	ENSG00000139746	RBM26	31.35	91.6055	Q5T8P6	RBP	NA

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lncRNA-DNA interaction for SNHG21

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

VAMP1,FASTKD3,MZF1,MCEE,TWNK,TTC31,MAPK8IP3,LYSMD4,SUGP2,N4BP2L2,BCS1L,DMTF1,L3HYPDH,UNKL,MRPL46,BCCIP,USP36,WDCP,ULK3,BCL7A,KMT2B,ZFP14,CENATAC,NPEPL1,WDR5B,ST7L,SAFB2,MSANTD2,TUBGCP6,CCDC14,FAM200A,MYO9A,ACAD8,PNPT1,EIF2B5,RPAP1,SETD2,MYBBP1A,UBA2,TTC14,BRPF1,KNTC1,SIN3A,KNSTRN,SLC2A11,GKAP1,SUGP1,TAZ,SPG7,SRSF4,SNUPN,RAMAC,PPIP5K1,DNAJC2,RCCD1,OGT,ARIH1,CPSF1,ERAL1,CLK2,MYEF2,MPLKIP,POLG2,DHX34,FANCD2,MST1,TUT4,CEP152,METTL17,FAN1,RIC8B,CPSF7,BBIP1,BLM,CLK1,AGBL5,GABPB1,RABL2A,DHPS,PRC1,RPAIN,OFD1,MRPS11,ACYP1,RBBP4,ARHGAP11A,IFT172,XPNPEP3,MIS12,HGS,RSRC2,INO80E,NAPB,EIF2A,APBA3,ZFP62,ALKBH2,ZBED8,ORMDL1,DHODH,TOPBP1,C22orf39,FGFBP3,C12orf73,DDX51,ORC2,SRSF2,C1orf52,CDK11A,TSEN54,LRRC37B,DHX35,SUPT20H,NXF1,DCUN1D2,ZFPL1,KIF23,EIF2B1,UQCC1,PAN2,C2orf76,FAM229A,RIOK1,DUS3L,STK25,ARHGAP33,KLHL17,MBTD1,ECD,ATXN2L,DNASE1,AP4E1,KLHL23,DVL2,DDX42,VCPKMT,SCNN1D,MKRN2,MRPS25,UQCRHL,POLM,RSL24D1,IQCC,ZNF30,DPM1,ILF3,GLI4,LENG8,SH2B1,C1orf159,PRR3,WBP4,UBE2G2,IP6K2,PPOX,ARIH2,PIF1,PPWD1,TRMT6,SASS6,MORF4L1,PIBF1,SPATA5L1,ICE2,TRIM65,BIVM,TIMM44,C20orf96,PHF7,DDX55,CIP2A,MIX23,MNS1,CAPN10,AP1G2,GLMN,BANP,FAM136A,GCFC2,THOC1,UNC45A,WDR59,ACBD6,TAMM41,IMP4,PCID2,UBL7,LTO1,METAP1D,NFYC,IFT80,CEP83,RFC4,OIP5,METTL23,RTF1,C17orf75,PARP2,PATZ1,LCMT2,PCED1A,EHMT2,SRSF9,BTAF1,DYNLT2,CEP70,ACIN1,ZC3H8,ANKRD49,PAXBP1,DNAJC19,TADA2A,FNBP4,INPP5E,KATNB1,RSRP1,PEX11A,CHD2,MTHFS,CIAO2A,AK6,HEMK1,UPF3B,LINS1,HERC1,IFT20,FRS3,C2orf68,MRE11,GK5,NDUFAF7,LSG1,SLC41A3,RBM6,TRMT13,KHDC1,TTBK2,ZFAND6,CCDC82,ACP1,KIF18B,CENPL,GGT7,EPM2AIP1,UCKL1,ABCB6,WDR27,PHF5A,EME2,KHDC4,SPG21,RSAD1,EP400P1,HPS4,PNISR,GEN1,SFPQ,CCDC51,NCBP2,ATP5IF1,SRSF7,ZNF10,DET1,ATAT1,SPRYD4,DUT,EIF3J,CEP63,TRMU,ATXN7L2,ZNF598,ADPGK,AKAP8,CDPF1,FBXO41,TJAP1,C12orf29,TAF1D,KATNBL1,MKS1,TAF4,C1orf35,CDK5RAP1,SPIN3,FOXRED1,COX11,NPRL2,CCNL2,TICRR,FBXO46,CLK3,RNPC3,ANKRD10,INCA1,C15orf40,CHTOP,TFAP4,ZDHHC8,C17orf58,DDTL,FBXO22,KLHL25,C1orf174,CCNT2,OSBPL7,PTCD3,KAT2A,RAD1,U2AF2,CSTF3,RBM26,PLA2G6,TUBGCP5,RBM25,ENTR1,ENDOV,SETD6,LIN9,PRPF39,TRIM45,MIB2,ZNF22,PABIR2,HIRA,TMEM69,HEXIM2,MRPS22,ARGLU1,ANKS3,YJEFN3,GON7,NEPRO,CIAO1,TUBGCP4,POLR2D,CCNL1,GMCL1,ANKRD54,USP19,ANKRA2,ASB7,C2orf49,KRI1,TMEM161B,RBM45,YAE1,PMS1,OGG1,KIF7,PSMG4,DDX31,ZGPAT,HDHD5,TIA1,ZNF83,NSUN6,ZNF3,DPH1,ERCC3,MEN1,NEIL1,IDH3A,VPS33B,NAT9,LUC7L,NUDCD2,WDR6,PNN,COA5,BRD8,CCAR1,CENPJ,BBS4,DPH7,CBX8,TRA2A,NSMCE4A,MAPKAPK5,CEP131,DUS1L,TPP2,NEURL4,HINFP,APBB3,AMY2B,WBP1,PARP16,RBM33,ADAL,TRIT1,SRRT,CEBPZ,AGAP6,RPS17,WRAP73,MPHOSPH10,TAF6L,MAPKBP1,RBM39,EDC3,C15orf61,TADA1,SLC26A6,INTS14,PGS1,TMEM267,ZCCHC8,IMP3,NRF1,ZNF2,RRNAD1,ZXDC,IQCB1,KAT8,PIGL,PPP5C,GBA2,CSAD,KIAA0895L,ATAD3B,FOXRED2,MUTYH,RBM28,ZNF74,DCAF8,IKZF5,TMEM259,SF3B1,CACTIN,LIN37,NUP42,PAN3,CWC22,DDX59,DCAF16,SUPT7L,TM2D3,CENPT,OSGEPL1,RBM4,DPP8,MTG1,FAM76B,ANAPC7,GTPBP3,RBMX,RBM4B,MRPS31,ANAPC2,C21orf58,TAF1C,RBM14,ADAT2,MYO19,TEFM,AAAS,SMPD4,CXXC1,MRNIP,DDX17,ARMC6,PUS7,ING4,HAUS5,MTRF1,RAD52,DYRK1A,CTDSPL2,FBXL12,CEP290,SDR39U1,TRPM7,MCM8,LEO1,ETFA,CDAN1,COIL,GPALPP1,GTF2A2,FAM216A,HTRA2,C12orf76,VPS52,WDR61,USP21,TIGD1,AP3S2,GPS2,TRIM52,NFS1,NOL12,SPIN2B,CLASRP,DFFB,STK36,ANKRD16,TTC32,GOLGA8B,STRADA,RMND5A,EIF2D,DIDO1,GOLGA8A,SETD4,C1orf109,TPRKB,PSMC3IP,AARSD1,DUSP28,RBM5,ANP32A,NKTR,BCDIN3D,TOMM5,ZNF84,SEC11A,RXRB,PARP6,PDCD6,WDR33,NUDT17,C17orf80,TRA2B,TIPIN,NGRN,MAN2C1,DXO,PDCD7,CCDC112,MRPL38,WHAMM,LIG1,PRPF4B,CCDC57,RABL2B,TRAPPC2,SIRT7

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for SNHG21

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

MVP,ATG7,MFSD5,IL13RA1,LRP10

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

ORF mutation

-lncRNA and exonskipping events are negatively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

LOF

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for SNHG21

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000250988	ENSG00000041802	LSG1	BLCA,DLBC,LAML,LUSC,UCS	LUSC
ENSG00000250988	ENSG00000100416	TRMU	BLCA,BRCA,DLBC,LAML,LGG,LUSC,PRAD,THCA	LUSC
ENSG00000250988	ENSG00000114503	NCBP2	BLCA,LUSC,SKCM,THYM,UCS	LUSC
ENSG00000250988	ENSG00000125351	UPF3B	BLCA,BRCA,LGG,LUSC,PRAD,SARC,SKCM,THCA,THYM	LUSC
ENSG00000250988	ENSG00000126261	UBA2	BLCA,DLBC,LUSC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000128944	KNSTRN	BLCA,CESC,DLBC,LUSC,SARC,SKCM,THYM,UCS	LUSC
ENSG00000250988	ENSG00000130299	GTPBP3	BLCA,BRCA,DLBC,LAML,LGG,LUSC,PRAD,THCA,THYM	LUSC
ENSG00000250988	ENSG00000132680	KHDC4	BLCA,CESC,DLBC,GBM,LAML,LGG,LUSC,MESO,PRAD,SARC,SKCM,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000134253	TRIM45	BLCA,CESC,LGG,LUSC,UCS	LUSC
ENSG00000250988	ENSG00000140451	PIF1	BLCA,CESC,DLBC,GBM,LUSC,MESO,SARC,SKCM,THYM	LUSC
ENSG00000250988	ENSG00000141570	CBX8	BLCA,DLBC,GBM,LUSC,PRAD,THYM	LUSC
ENSG00000250988	ENSG00000163026	WDCP	BLCA,CESC,LUSC,TGCT,THCA,THYM,UCS	LUSC
ENSG00000250988	ENSG00000166965	RCCD1	BLCA,BRCA,CESC,DLBC,GBM,LAML,LGG,LUSC,MESO,OV,PRAD,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS	LUSC
ENSG00000250988	ENSG00000205981	DNAJC19	BLCA,DLBC,LUSC,SKCM,THCA,THYM	LUSC
ENSG00000250988	ENSG00000249115	HAUS5	BLCA,BRCA,CESC,LAML,LUSC,MESO,PRAD,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000035141	FAM136A	BRCA,DLBC,LAML,LUSC,THCA	LUSC
ENSG00000250988	ENSG00000108773	KAT2A	BRCA,DLBC,GBM,LAML,LGG,LUSC,PRAD,SKCM,THCA	LUSC
ENSG00000250988	ENSG00000129347	KRI1	BRCA,DLBC,LAML,LGG,LUSC,PRAD,THCA,THYM	LUSC
ENSG00000250988	ENSG00000140534	TICRR	BRCA,DLBC,LUSC,THYM,UCS	LUSC
ENSG00000250988	ENSG00000160072	ATAD3B	BRCA,DLBC,LGG,LUSC,PRAD,THCA	LUSC
ENSG00000250988	ENSG00000163918	RFC4	BRCA,DLBC,GBM,LUSC,PRAD,SKCM,THYM	LUSC
ENSG00000250988	ENSG00000166813	KIF7	BRCA,CESC,LGG,LUSC,MESO,SARC,TGCT,THYM,UCEC,UCS	LUSC
ENSG00000250988	ENSG00000173226	IQCB1	BRCA,DLBC,LUSC,SKCM,THYM	LUSC
ENSG00000250988	ENSG00000189046	ALKBH2	BRCA,GBM,LAML,LGG,LUSC,SKCM,TGCT,THCA,UCS	LUSC
ENSG00000250988	ENSG00000273899	NOL12	BRCA,DLBC,LGG,LUSC,PRAD,TGCT,THCA	LUSC
ENSG00000250988	ENSG00000069998	HDHD5	CESC,DLBC,LGG,LUSC,PRAD,THCA	LUSC
ENSG00000250988	ENSG00000075131	TIPIN	CESC,DLBC,GBM,LUSC,OV,SARC,SKCM,THYM	LUSC
ENSG00000250988	ENSG00000100350	FOXRED2	CESC,LUSC,MESO,TGCT,UCS	LUSC
ENSG00000250988	ENSG00000104147	OIP5	CESC,DLBC,LUSC,SKCM,THYM,UCS	LUSC
ENSG00000250988	ENSG00000110987	BCL7A	CESC,LAML,LUSC,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000125885	MCM8	CESC,LUSC,SKCM,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000137807	KIF23	CESC,DLBC,LUSC,SARC,SKCM,THYM,UCS	LUSC
ENSG00000250988	ENSG00000175265	GOLGA8A	CESC,LAML,LGG,LUSC,MESO,PRAD,SKCM,THCA	LUSC
ENSG00000250988	ENSG00000184445	KNTC1	CESC,LUSC,SARC,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000197299	BLM	CESC,DLBC,LUSC,SARC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000198901	PRC1	CESC,DLBC,LUSC,MESO,SARC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000089195	TRMT6	DLBC,LUSC,SKCM,TGCT,UCS	LUSC
ENSG00000250988	ENSG00000103995	CEP152	DLBC,LUSC,SKCM,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000120334	CENPL	DLBC,LUSC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000131470	PSMC3IP	DLBC,GBM,LUSC,PRAD,THYM,UCS	LUSC
ENSG00000250988	ENSG00000151849	CENPJ	DLBC,LUSC,MESO,SKCM,TGCT,THCA,THYM	LUSC
ENSG00000250988	ENSG00000160124	MIX23	DLBC,LGG,LUSC,PRAD,SKCM,THCA	LUSC
ENSG00000250988	ENSG00000163013	FBXO41	DLBC,LAML,LUSC,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000163507	CIP2A	DLBC,LUSC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000163781	TOPBP1	DLBC,LUSC,SKCM,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000164051	CCDC51	DLBC,LAML,LUSC,SARC,THCA	LUSC
ENSG00000250988	ENSG00000178295	GEN1	DLBC,LUSC,SKCM,TGCT,THYM	LUSC
ENSG00000250988	ENSG00000183814	LIN9	DLBC,LUSC,SARC,SKCM,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000186185	KIF18B	DLBC,LUSC,THYM,UCEC,UCS	LUSC
ENSG00000250988	ENSG00000198826	ARHGAP11A	DLBC,LUSC,TGCT,THYM,UCS	LUSC
ENSG00000250988	ENSG00000225697	SLC26A6	DLBC,LGG,LUSC,PRAD,THYM	LUSC
ENSG00000250988	ENSG00000278259	MYO19	DLBC,LGG,LUSC,PRAD,SARC,TGCT	LUSC
ENSG00000250988	ENSG00000115657	ABCB6	GBM,LGG,LUSC,PRAD,THCA,UCEC,UCS	LUSC
ENSG00000250988	ENSG00000143793	C1orf35	GBM,LGG,LUSC,PRAD,THCA	LUSC
ENSG00000250988	ENSG00000196510	ANAPC7	GBM,LUSC,THCA,THYM,UCS	LUSC
ENSG00000250988	ENSG00000101452	DHX35	LAML,LUSC,PRAD,SARC,THCA	LUSC
ENSG00000250988	ENSG00000250067	YJEFN3	LGG,LUSC,MESO,PRAD,TGCT	LUSC
ENSG00000250988	ENSG00000156876	SASS6	LUSC,SARC,SKCM,TGCT,THYM,UCS	LUSC

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

Top

lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000250988.6	ENST00000544685.2	88	1081	815
ENSG00000250988.6	ENST00000558687.1	53	93	254
ENSG00000250988.6	ENST00000561107.4	59	178	2
ENSG00000250988.6	ENST00000558174.4	53	85	246
ENSG00000250988.6	ENST00000559366.1	53	74	235

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential