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lncRNA: ENSG00000250436 |
Summary for LINC02499 |
Gene summary |
Gene information | Ensembl ID | ENSG00000250436 | Gene symbol | LINC02499 |
Gene name | long intergenic non-protein coding RNA 2499 | |
HGNC | 53484 | |
Entrez ID | 728040 | |
Gene type | lincRNA | |
Synonyms | LINC02499|RP11-622A1.2|04q13.3 | |
UniProtAcc |
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Structure and expression level for LINC02499 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000250436 | 2.352882e+02 | -5.872030e+00 | 1.076211e+00 | -5.456205e+00 | 4.860000e-08 | 4.080000e-07 | DOWN | CHOL |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000250436 | -5.252572e-01 | 2.116082e-04 | CHOL | 5.280785e-04 |
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lncRNA-Protein interaction for LINC02499 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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