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lncRNA: ENSG00000249628 |
Summary for LINC00942 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000249628 | Gene symbol | LINC00942 |
| Gene name | long intergenic non-protein coding RNA 942 | |
| HGNC | 48636 | |
| Entrez ID | 100292680 | |
| Gene type | lincRNA | |
| Synonyms | 12p13.33|LINC00942 | |
| UniProtAcc |
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Structure and expression level for LINC00942 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000249628 | 4.666711e+01 | 2.347805e+00 | 5.634687e-01 | 4.166701e+00 | 3.090000e-05 | 1.876210e-04 | UP | BLCA |
| ENSG00000249628 | 7.038023e+01 | 2.230972e+00 | 3.496438e-01 | 6.380701e+00 | 1.760000e-10 | 1.350000e-09 | UP | HNSC |
| ENSG00000249628 | 8.399553e+01 | 3.994459e+00 | 5.963125e-01 | 6.698600e+00 | 2.100000e-11 | 1.850000e-10 | UP | KIRP |
| ENSG00000249628 | 2.425318e+02 | 4.852817e+00 | 8.431142e-01 | 5.755824e+00 | 8.620000e-09 | 4.790000e-07 | UP | ESCA |
| ENSG00000249628 | 7.730419e+02 | 6.975389e+00 | 4.339726e-01 | 1.607334e+01 | 3.920000e-58 | 1.280000e-56 | UP | LUSC |
| ENSG00000249628 | 2.753531e+02 | 6.079758e+00 | 3.706015e-01 | 1.640511e+01 | 1.760000e-60 | 1.570000e-58 | UP | LUAD |
| ENSG00000249628 | 6.850383e+01 | 6.141786e+00 | 5.802817e-01 | 1.058415e+01 | 3.530000e-26 | 1.210000e-24 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC00942 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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