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lncRNA: ENSG00000249602 |
Summary for RP11-98D18.3 |
Gene summary |
Gene information | Ensembl ID | ENSG00000249602 | Gene symbol | RP11-98D18.3 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | antisense | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-98D18.3 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000249602 | 2.103726e+01 | -1.241709e+00 | 3.217564e-01 | -3.859157e+00 | 1.137790e-04 | 5.553700e-04 | DOWN | GBM |
ENSG00000249602 | 2.429399e+01 | 1.559786e+00 | 2.920554e-01 | 5.340721e+00 | 9.260000e-08 | 1.050000e-06 | UP | BLCA |
ENSG00000249602 | 3.718483e+01 | 2.320977e+00 | 7.121152e-01 | 3.259271e+00 | 1.116988e-03 | 8.650631e-03 | UP | CESC |
ENSG00000249602 | 2.013034e+01 | 1.204779e+00 | 2.269820e-01 | 5.307818e+00 | 1.110000e-07 | 5.820000e-07 | UP | HNSC |
ENSG00000249602 | 1.378529e+01 | 1.538582e+00 | 2.041400e-01 | 7.536895e+00 | 4.810000e-14 | 4.610000e-13 | UP | UCEC |
ENSG00000249602 | 4.111738e+01 | 1.506020e+00 | 1.118040e-01 | 1.347017e+01 | 2.340000e-41 | 3.660000e-40 | UP | BRCA |
ENSG00000249602 | 4.017022e+01 | 1.518810e+00 | 1.398150e-01 | 1.086299e+01 | 1.730000e-27 | 2.900000e-26 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for RP11-98D18.3 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000249602 | ENST00000512280 | RP11-98D18.3 | ENSG00000132153 | DHX30 | -1.11 | 91.4705 | Q7L2E3 | RBP | NA |
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