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lncRNA: ENSG00000249550 |
Summary for LINC01234 |
Gene summary |
Gene information | Ensembl ID | ENSG00000249550 | Gene symbol | LINC01234 |
Gene name | long intergenic non-protein coding RNA 1234 | |
HGNC | 49757 | |
Entrez ID | 100506465 | |
Gene type | lincRNA | |
Synonyms | LINC01234|12q24.13 | |
UniProtAcc |
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Structure and expression level for LINC01234 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000249550 | 3.216568e+02 | 7.189315e+00 | 3.627633e-01 | 1.981819e+01 | 2.070000e-87 | 1.610000e-85 | UP | LUSC |
ENSG00000249550 | 1.541616e+02 | 7.240988e+00 | 8.403530e-01 | 8.616603e+00 | 6.900000e-18 | 9.230000e-16 | UP | READ |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01234 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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