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lncRNA: ENSG00000244459 |
Summary for RP11-1398P2.1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000244459 | Gene symbol | RP11-1398P2.1 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-1398P2.1 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000244459 | 4.530338e+01 | 1.580291e+00 | 4.331058e-01 | 3.648742e+00 | 2.635270e-04 | 1.051331e-03 | UP | CHOL |
ENSG00000244459 | 3.845498e+01 | 1.148323e+00 | 1.193271e-01 | 9.623322e+00 | 6.370000e-22 | 4.270000e-21 | UP | KIRC |
ENSG00000244459 | 4.214575e+01 | 1.378873e+00 | 2.223359e-01 | 6.201758e+00 | 5.580000e-10 | 4.030000e-09 | UP | KIRP |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000244459 | 3.413862e-01 | 2.172887e-02 | CHOL | 2.336826e-02 |
ENSG00000244459 | 3.440530e-01 | 2.455437e-18 | KIRC | 1.534648e-17 |
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lncRNA-Protein interaction for RP11-1398P2.1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000167967 | E4F1 | 43.18 | 93.4765 | Q66K89 | TF | NA |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000127445 | PIN1 | 22.5 | 90.694 | Q13526 | TF | NA |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000136630 | HLX | 12.11 | 91.0697 | Q14774 | TF | NA |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000148300 | REXO4 | 9.15 | 91.6613 | Q9GZR2 | TF | NA |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000125817 | CENPB | 7.96 | 90.9925 | P07199 | TF | NA |
ENSG00000244459 | ENST00000466692 | RP11-1398P2.1 | ENSG00000250571 | GLI4 | 6.49 | 91.1826 | P10075 | TF | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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