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lncRNA: ENSG00000243694 |
Summary for LINC02027 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000243694 | Gene symbol | LINC02027 |
| Gene name | long intergenic non-protein coding RNA 2027 | |
| HGNC | 52862 | |
| Entrez ID | 728290 | |
| Gene type | lincRNA | |
| Synonyms | RP11-6B4.1|LINC02027|03p12.2 | |
| UniProtAcc |
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Structure and expression level for LINC02027 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000243694 | 7.637510e+01 | -5.844382e+00 | 1.007570e+00 | -5.800470e+00 | 6.610000e-09 | 6.430000e-08 | DOWN | CHOL |
| ENSG00000243694 | 5.747501e+01 | -1.319959e+00 | 2.073590e-01 | -6.365571e+00 | 1.950000e-10 | 6.270000e-10 | DOWN | KIRC |
| ENSG00000243694 | 8.212158e+01 | -2.075825e+00 | 4.395697e-01 | -4.722403e+00 | 2.330000e-06 | 8.470000e-06 | DOWN | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000243694 | -5.890316e-01 | 2.075585e-05 | CHOL | 1.040566e-04 |
| ENSG00000243694 | -3.439043e-01 | 1.511151e-12 | LIHC | 8.558051e-12 |
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lncRNA-Protein interaction for LINC02027 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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