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lncRNA: ENSG00000240291

Summary for RP11-499P20.2

Gene summary

Gene information	Ensembl ID	ENSG00000240291
	Gene symbol	RP11-499P20.2
	Gene name
	HGNC
	Entrez ID
	Gene type	antisense
	Synonyms
	UniProtAcc

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Structure and expression level for RP11-499P20.2

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000240291	1.602201e+02	-1.633356e+00	3.364647e-01	-4.854465e+00	1.210000e-06	7.810000e-06	DOWN	CHOL
ENSG00000240291	9.797198e+01	1.352630e+00	2.358776e-01	5.734457e+00	9.780000e-09	5.880000e-08	UP	KIRP

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000240291	3.046926e-01	7.053186e-03	ACC	1.800814e-02

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lncRNA-Protein interaction for RP11-499P20.2

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000240291	ENST00000425669	RP11-499P20.2	ENSG00000162601	MYSM1	66.69	92.0354	Q5VVJ2	TF,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000240291	ENST00000425669	RP11-499P20.2	ENSG00000162601	MYSM1	66.69	92.0154	Q5VVJ2	TF,Epi	NA
ENSG00000240291	ENST00000425669	RP11-499P20.2	ENSG00000141258	SGSM2	50.28	92.4455	O43147	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

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lncRNA-DNA interaction for RP11-499P20.2

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

ZNF30,AGAP6,ARHGEF1,ATAT1,GSDMB,PYROXD2,EPOR,GLI4,OVGP1,RBM39,SLC25A27,LENG8,BICRA,SH2B1,CIRBP,C1orf159,DGKA,MZF1,MYSM1,IP6K2,PPOX,MAPK8IP3,N4BP2L2,BCS1L,PPWD1,DMTF1,PIGL,KATNBL1,CSAD,KIAA0895L,LMBR1L,GPCPD1,TRAPPC12,GPATCH2,TBRG1,DCAF8,ULK3,ABCA5,PHYKPL,TMEM259,CCNL2,FRA10AC1,CAPN10,LIN37,AP1G2,CENATAC,NPEPL1,GLMN,CLK3,RNPC3,OGA,ZFP69,SLC6A16,ANKRD10,SAFB2,VPS9D1,MSANTD2,TUBGCP6,ANKMY1,WDR59,THOC1,CCDC14,GABBR1,TMEM175,CLK4,SUPT7L,ZBED5,DDTL,CENPT,TTC14,MC1R,KYAT1,CCNT2,MTG1,SPRN,SUGP1,TAZ,SPG7,ZNF44,POGZ,KAT2A,ACBD4,LTO1,RBM4B,PPIP5K1,ECHDC2,METAP1D,OGT,ANAPC2,RBM26,PLA2G6,TAF1C,CLK2,ADAT2,MYEF2,RBM25,LCAT,POLG2,DHX34,IFT80,CHKB,METTL17,SETD6,POLI,CAPN15,CNKSR1,OSGEP,EXD3,CTC1,CLK1,PRPF39,CXXC1,MRRF,MRNIP,ERMARD,RABL2A,ELMOD3,TRIM45,OFD1,DDX17,PCED1A,ACYP1,GSTM2,SLC25A29,MIB2,HAUS5,FCHSD1,MTRF1,IFT172,RAD52,PHF1,DYNLT2,ACIN1,ZC3H8,HDAC10,HSF4,ENOSF1,ANKS3,ARGLU1,NOXA1,YJEFN3,ANKRD49,C3orf62,PAXBP1,CCNL1,RGL3,SGSM2,FNBP4,INPP5E,POLL,ORMDL1,FAM228B,RSRP1,TIGD1,RBM45,HSPBAP1,CRYGS,YAE1,CHD2,AGER,GPS2,TRIM52,LBHD1,NOL12,CLEC2D,SPOUT1,EGFL8,CLASRP,SRSF2,TTC13,CDK11A,FIZ1,STK36,TTC32,LTB4R,KIFC2,TSNARE1,TIA1,ZMAT1,ZNF83,ATG4B,GOLGA8B,HEMK1,NSUN6,CCDC191,LMNTD2,NXF1,STRADA,ZNF18,LZTS2,PAN2,CLHC1,GOLGA8A,FAM229A,SETD4,NEIL1,NDUFAF7,RBM6,SZT2,GIGYF1,TRMT13,ADAMTS13,ZNF862,FAM193B,IDUA,AARSD1,DUSP28,SLC25A28,SEC31B,RBM5,NKTR,MYL5,LUC7L,KLHL17,ARHGAP33,MBTD1,PNN,COA5,DNASE1,LUC7L2,TTLL3,HEXD,ZNF84,CCAR1,C14orf93,VCPKMT,PARP6,DPH7,SCNN1D,C19orf18,CCDC24,TRA2A,WDR27,EME2,DUS1L,HINFP,KHDC4,NR2C1,LRP5L,PLXNB1,CROCC,APBB3,RSAD1,AMY2B,TSC1,ERCC5,SH3GLB2,EP400P1,CYTH2,PNISR,SFPQ,MAN2C1,DXO,AMT,ACAP3,USPL1,LRRC27,CARD8,WBP1,CCDC57,TRAPPC2,TEPSIN,RBM33,SIRT7,HERC4,NADSYN1,CFAP44,ZNF10

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

DCAF8,ADAMTS13,DPH7,C14orf93,TNFRSF25,GTF2H4,ZNF18,ZMAT1,HAUS5,KAT2A,RAD52,LMBR1L,EFHC1,ZNF30,CTC1,PNN,TRA2A,ABCA5,STX16,HSPBAP1,HEMK1,DDX17,SH3GLB2,EP400NL,TIA1,RBM5,E4F1,FAM73B,KPNA5,C9orf114,SLC6A16,RGL3,SETD6,LRRC27,ZNF83,LBHD1,ENOSF1,FRA10AC1,HERC4,OSGEP,CLASRP,TCTE3,LUC7L,MAPK8IP3,CCDC66,MZF1,RAD9A,C3orf62,CXXC1,QTRT1,MYL5,PAXBP1,KIAA0907,SRSF5,STRADA,TRAF5,METTL22,SETD4,POGZ,ACCS,ENGASE,C19orf18,GGA1,CCDC130,GSTM2,CYTH2,ING5,STK36,TBRG1,MTRF1,CCNL1,MAN2C1,AARSD1,PRKRIP1,CARD8,RBM6,ERMARD,ARGLU1,RBM39,AP4B1,MDM4,CIRBP,TAZ

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for RP11-499P20.2

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

YIPF5,RNH1,PSMC1,RAB5C,SSR3,SURF4,EIF4G1,RAB7A,HSPA8

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000240291	ENST00000436485	exon_skip_1234	chr1:11658532-11658628	-16.18	-0.2157	FBXO44	ENST00000251547,ENST00000376770	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000240291	ENST00000436485	exon_skip_41813	chr10:68337857-68337996	-17.60	-0.1294	HNRNPH3	ENST00000265866	Frame-shift
ENSG00000240291	ENST00000436485	exon_skip_370518	chr22:50247691-50247776	-16.75	-0.2175	HDAC10	ENST00000216271	Frame-shift
ENSG00000240291	ENST00000436485	exon_skip_382458	chr3:38131595-38131638	-10.60	-0.3926	ACAA1	ENST00000333167	Frame-shift
ENSG00000240291	ENST00000425669	exon_skip_387016	chr3:121788283-121788432	-14.25	-0.1071	IQCB1	ENST00000310864	Frame-shift
ENSG00000240291	ENST00000436485	exon_skip_442657	chr5:74730259-74730398	-10.10	-0.1020	GFM2	ENST00000296805,ENST00000509430	Frame-shift
ENSG00000240291	ENST00000436485	exon_skip_470226	chr7:103307595-103307708	-13.10	-0.1541	PMPCB	ENST00000249269	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for RP11-499P20.2

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000240291	ENSG00000108773	KAT2A	ACC,BLCA,BRCA,DLBC,KIRP,LGG,LIHC,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000132522	GPS2	ACC,BLCA,BRCA,CHOL,DLBC,KIRP,LGG,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000139631	CSAD	ACC,BLCA,BRCA,CHOL,DLBC,KIRP,LGG,TGCT,UCEC,UCS		CHOL
ENSG00000240291	ENSG00000175455	CCDC14	ACC,BLCA,BRCA,DLBC,KIRP,LAML,LGG,LIHC,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000184465	WDR27	ACC,BRCA,DLBC,KIRP,LAML,LGG,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000186166	CENATAC	ACC,BLCA,BRCA,KIRP,LGG,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000196123	KIAA0895L	ACC,BLCA,BRCA,DLBC,KIRP,LGG,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000197948	FCHSD1	ACC,BLCA,BRCA,DLBC,KIRP,TGCT,UCS	KIRP
ENSG00000240291	ENSG00000204149	AGAP6	ACC,BLCA,BRCA,DLBC,KIRP,LGG,LIHC,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000204305	AGER	ACC,BLCA,BRCA,CHOL,DLBC,KIRP,LGG,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000204681	GABBR1	ACC,BRCA,DLBC,KIRP,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000213398	LCAT	ACC,BLCA,BRCA,KIRP,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000214021	TTLL3	ACC,BLCA,BRCA,KIRP,LGG,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000221978	CCNL2	ACC,BLCA,BRCA,CHOL,DLBC,KIRP,LGG,LIHC,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000250067	YJEFN3	ACC,DLBC,KIRP,LAML,LGG,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000258839	MC1R	ACC,KIRP,LGG,TGCT,THYM,UCEC	KIRP
ENSG00000240291	ENSG00000065357	DGKA	BLCA,DLBC,KIRP,LGG,TGCT	KIRP
ENSG00000240291	ENSG00000073605	GSDMB	BLCA,DLBC,KIRP,LGG,LIHC,TGCT,THYM,UCS	KIRP
ENSG00000240291	ENSG00000099974	DDTL	BLCA,BRCA,CHOL,DLBC,KIRP,LGG,LIHC,THYM		CHOL
ENSG00000240291	ENSG00000100429	HDAC10	BLCA,BRCA,KIRP,LGG,TGCT,UCEC	KIRP
ENSG00000240291	ENSG00000121310	ECHDC2	BLCA,BRCA,CHOL,KIRP,UCEC,UCS		CHOL
ENSG00000240291	ENSG00000127415	IDUA	BLCA,BRCA,KIRP,LGG,UCEC	KIRP
ENSG00000240291	ENSG00000138834	MAPK8IP3	BLCA,BRCA,DLBC,KIRP,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000145020	AMT	BLCA,BRCA,CHOL,DLBC,KIRP		CHOL
ENSG00000240291	ENSG00000162194	LBHD1	BLCA,DLBC,KIRP,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000167702	KIFC2	BLCA,KIRP,TGCT,THYM,UCEC	KIRP
ENSG00000240291	ENSG00000168096	ANKS3	BLCA,BRCA,DLBC,KIRP,LGG,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000175265	GOLGA8A	BLCA,BRCA,DLBC,KIRP,LGG,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000181513	ACBD4	BLCA,BRCA,CHOL,DLBC,KIRP,UCS		CHOL
ENSG00000240291	ENSG00000197774	EME2	BLCA,BRCA,DLBC,KIRP,LGG,THYM,UCEC	KIRP
ENSG00000240291	ENSG00000213139	CRYGS	BLCA,CHOL,DLBC,KIRP,TGCT,UCEC	KIRP
ENSG00000240291	ENSG00000215252	GOLGA8B	BLCA,BRCA,CHOL,DLBC,KIRP,LGG,LIHC,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000215375	MYL5	BLCA,BRCA,DLBC,KIRP,LGG,UCEC	KIRP
ENSG00000240291	ENSG00000069493	CLEC2D	BRCA,DLBC,KIRP,LGG,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000102125	TAZ	BRCA,DLBC,KIRP,LGG,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000135473	PAN2	BRCA,CHOL,DLBC,KIRP,LGG,TGCT,UCEC,UCS		CHOL
ENSG00000240291	ENSG00000162572	SCNN1D	BRCA,CHOL,KIRP,LGG,TGCT,THYM	KIRP	CHOL
ENSG00000240291	ENSG00000213903	LTB4R	BRCA,CHOL,DLBC,KIRP,LGG,TGCT,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000063127	SLC6A16	CHOL,DLBC,KIRP,TGCT,UCS		CHOL
ENSG00000240291	ENSG00000154265	ABCA5	CHOL,KIRP,LAML,LIHC,UCS		CHOL
ENSG00000240291	ENSG00000240038	AMY2B	CHOL,KIRP,LAML,LGG,THYM	KIRP
ENSG00000240291	ENSG00000256525	POLG2	DLBC,KIRP,LGG,THYM,UCS	KIRP
ENSG00000240291	ENSG00000160323	ADAMTS13	KIRP,LGG,THYM,UCEC,UCS	KIRP
ENSG00000240291	ENSG00000241404	EGFL8	KIRP,LAML,LGG,TGCT,UCS	KIRP

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000132716	DCAF8	5	BRCA,DLBC,KIRP,TGCT,THYM
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000148399	DPH7	5	BLCA,BRCA,DLBC,KIRP,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000166432	ZMAT1	5	BRCA,KIRP,PRAD,TGCT,THYM
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000108773	KAT2A	7	BLCA,BRCA,DLBC,KIRP,LGG,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000096093	EFHC1	5	BLCA,BRCA,DLBC,KIRP,TGCT
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000100201	DDX17	5	BRCA,DLBC,KIRP,PRAD,THYM
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000185684	EP400P1	5	BLCA,BRCA,DLBC,LGG,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000116001	TIA1	5	BLCA,DLBC,KIRP,TGCT,THYM
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000003756	RBM5	8	BLCA,BRCA,DLBC,KIRP,LGG,PRAD,TGCT,UCEC
ENSG00000240291	ENSG00000162601	MYSM1	ENSG00000003756	RBM5	5	BRCA,KIRP,LAML,LGG,PCPG
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000167967	E4F1	5	BLCA,DLBC,KIRP,LGG,PRAD
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000148343	MIGA2	5	BLCA,DLBC,KIRP,LGG,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000167766	ZNF83	7	BLCA,BRCA,DLBC,KIRP,PRAD,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000132199	ENOSF1	5	BLCA,BRCA,KIRP,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000104859	CLASRP	7	BLCA,BRCA,DLBC,KIRP,LGG,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000007392	LUC7L	7	BLCA,BRCA,DLBC,KIRP,LGG,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000138834	MAPK8IP3	6	BLCA,BRCA,DLBC,KIRP,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000099326	MZF1	9	BLCA,BRCA,DLBC,KIRP,LGG,PRAD,TGCT,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000188315	C3orf62	5	BLCA,BRCA,KIRP,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000154832	CXXC1	5	BLCA,BRCA,DLBC,KIRP,PRAD
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000100650	SRSF5	7	BLCA,BRCA,DLBC,KIRP,LGG,PRAD,THYM
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000167280	ENGASE	7	BLCA,BRCA,DLBC,KIRP,LGG,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000104957	CCDC130	6	BLCA,BRCA,DLBC,KIRP,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000163482	STK36	5	BLCA,BRCA,KIRP,TGCT,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000140400	MAN2C1	5	BLCA,BRCA,KIRP,LGG,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000004534	RBM6	8	BLCA,BRCA,DLBC,KIRP,LGG,PRAD,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000130023	ERMARD	6	BLCA,BRCA,DLBC,KIRP,THYM,UCEC
ENSG00000240291	ENSG00000141258	SGSM2	ENSG00000134884	ARGLU1	7	BLCA,BRCA,DLBC,KIRP,LGG,TGCT,THYM

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000240291.1	ENST00000425669.1	98	758	462
ENSG00000240291.1	ENST00000436485.1	130	702	310

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential