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lncRNA: ENSG00000238142 |
Summary for RP11-108M9.4 |
Gene summary |
Gene information | Ensembl ID | ENSG00000238142 | Gene symbol | RP11-108M9.4 |
Gene name | ||
HGNC | ||
Entrez ID | 105376805 | |
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-108M9.4 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000238142 | 1.436815e+02 | 1.408202e+00 | 4.751510e-01 | 2.963694e+00 | 3.039704e-03 | 9.911627e-03 | UP | GBM |
ENSG00000238142 | 3.686962e+01 | -1.004799e+00 | 2.646599e-01 | -3.796567e+00 | 1.467140e-04 | 4.406370e-04 | DOWN | UCEC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000238142 | -3.597599e-01 | 5.348004e-04 | KICH | 7.766650e-04 |
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lncRNA-Protein interaction for RP11-108M9.4 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000238142 | ENST00000457075 | RP11-108M9.4 | ENSG00000102878 | HSF4 | 4.78 | 90.8363 | Q9ULV5 | TF | NA |
ENSG00000238142 | ENST00000422124 | RP11-108M9.4 | ENSG00000102878 | HSF4 | 3.87 | 91.7481 | Q9ULV5 | TF | NA |
ENSG00000238142 | ENST00000457075 | RP11-108M9.4 | ENSG00000126456 | IRF3 | 1.04 | 91.5773 | Q14653 | TF | NA |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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