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lncRNA: ENSG00000237940 |
Summary for LINC01238 |
Gene summary |
Gene information | Ensembl ID | ENSG00000237940 | Gene symbol | LINC01238 |
Gene name | long intergenic non-protein coding RNA 1238 | |
HGNC | 49795 | |
Entrez ID | 102723927 | |
Gene type | lincRNA | |
Synonyms | AC093642.3|LINC01238|02q37.3 | |
UniProtAcc |
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Structure and expression level for LINC01238 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000237940 | 1.818633e+02 | 1.443023e+00 | 1.590509e-01 | 9.072712e+00 | 1.160000e-19 | 2.830000e-18 | UP | PRAD |
ENSG00000237940 | 9.492781e+02 | 3.013316e+00 | 2.248848e-01 | 1.339938e+01 | 6.100000e-41 | 9.390000e-40 | UP | BRCA |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000237940 | 3.188282e-01 | 1.747091e-14 | PRAD | 1.167104e-13 |
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lncRNA-Protein interaction for LINC01238 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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