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lncRNA: ENSG00000237517 |
Summary for DGCR5 |
Gene summary |
Gene information | Ensembl ID | ENSG00000237517 | Gene symbol | DGCR5 |
Gene name | DiGeorge syndrome critical region gene 5 | |
HGNC | 16757 | |
Entrez ID | ||
Gene type | antisense | |
Synonyms | 22q11.21|DGCR5 | |
UniProtAcc |
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Structure and expression level for DGCR5 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000237517 | 5.136300e+02 | -2.414662e+00 | 4.402930e-01 | -5.484217e+00 | 4.150000e-08 | 4.680000e-07 | DOWN | GBM |
ENSG00000237517 | 4.201905e+03 | 4.704673e+00 | 1.682345e-01 | 2.796497e+01 | 4.340000e-172 | 5.610000e-169 | UP | KIRC |
ENSG00000237517 | 1.064586e+03 | 3.044115e+00 | 2.615877e-01 | 1.163707e+01 | 2.670000e-31 | 1.970000e-29 | UP | KIRP |
ENSG00000237517 | 3.489939e+02 | 3.647555e+00 | 2.094028e-01 | 1.741884e+01 | 5.940000e-68 | 7.390000e-66 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000237517 | 3.504222e-01 | 5.254055e-19 | KIRC | 3.528843e-18 |
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lncRNA-Protein interaction for DGCR5 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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