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lncRNA: ENSG00000237424

Summary for FOXD2-AS1

Gene summary

Gene information	Ensembl ID	ENSG00000237424
	Gene symbol	FOXD2-AS1
	Gene name	FOXD2 adjacent opposite strand RNA 1
	HGNC	44256
	Entrez ID	84793
	Gene type	antisense
	Synonyms	FOXD2-AS1\|01p33
	UniProtAcc

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Structure and expression level for FOXD2-AS1

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000237424	1.315715e+02	3.355207e+00	5.766791e-01	5.818153e+00	5.950000e-09	8.100000e-08	UP	GBM
ENSG00000237424	2.147719e+02	1.614851e+00	2.649166e-01	6.095697e+00	1.090000e-09	1.200000e-08	UP	CHOL
ENSG00000237424	2.015893e+02	1.538021e+00	1.040333e-01	1.478393e+01	1.860000e-49	4.400000e-48	UP	KIRC
ENSG00000237424	2.105578e+02	1.679224e+00	2.623872e-01	6.399793e+00	1.560000e-10	3.140000e-09	UP	BLCA
ENSG00000237424	3.447188e+02	1.607908e+00	4.910556e-01	3.274390e+00	1.058903e-03	8.296550e-03	UP	CESC
ENSG00000237424	1.665170e+02	2.392600e+00	1.428150e-01	1.675314e+01	5.370000e-63	7.470000e-60	UP	HNSC
ENSG00000237424	1.911019e+02	1.675572e+00	1.847034e-01	9.071691e+00	1.170000e-19	2.720000e-18	UP	KIRP
ENSG00000237424	2.168447e+02	1.339422e+00	1.268426e-01	1.055972e+01	4.580000e-26	4.060000e-25	UP	LUSC
ENSG00000237424	1.982186e+02	1.651143e+00	1.189177e-01	1.388475e+01	7.840000e-44	3.240000e-42	UP	LUAD
ENSG00000237424	1.588425e+02	2.102287e+00	1.879602e-01	1.118474e+01	4.840000e-29	2.260000e-27	UP	LIHC
ENSG00000237424	4.109806e+02	2.323281e+00	1.865054e-01	1.245690e+01	1.280000e-35	9.070000e-33	UP	STAD

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000237424	4.353019e-01	2.803352e-03	CHOL	4.002748e-03
ENSG00000237424	3.916202e-01	5.710754e-19	HNSC	2.438492e-16
ENSG00000237424	4.133157e-01	1.737284e-26	KIRC	4.225827e-25
ENSG00000237424	4.741488e-01	8.975764e-18	KIRP	6.855240e-16
ENSG00000237424	3.373345e-01	4.216313e-12	LIHC	2.166717e-11

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lncRNA-Protein interaction for FOXD2-AS1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000132780	NASP	56.43	94.3011	P49321	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000167670	CHAF1A	54.66	92.7658	Q13111	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000154832	CXXC1	42.74	90.2132	Q9P0U4	TF,Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000130726	TRIM28	32.75	91.3902	Q13263	Epi	ChIP-seq
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000132382	MYBBP1A	54.13	90.9707	Q9BQG0	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000160949	TONSL	51.01	93.7689	Q96HA7	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000115241	PPM1G	43.1	93.7425	O15355	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000106462	EZH2	42.65	95.1414	Q15910	Epi	RIP,RNA,pull-down,assay,ChIP-seq
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000123485	HJURP	38.35	90.203	Q8NCD3	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000141582	CBX4	32.05	93.9993	O00257	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000171456	ASXL1	23.65	94.3478	Q8IXJ9	Epi	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000172530	BANP	18.67	91.6392	Q8N9N5	Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000167967	E4F1	54.62	94.3663	Q66K89	TF	NA
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000154832	CXXC1	42.74	90.3332	Q9P0U4	TF,Epi	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000162775	RBM15	42.81	93.8254	Q96T37	RBP	ENCODE,eCLIP,iCLIP
ENSG00000237424	ENST00000445551	FOXD2-AS1	ENSG00000147274	RBMX	20.57	91.4074	P38159	RBP	NA

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lncRNA-DNA interaction for FOXD2-AS1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

DLGAP5,FKBP8,ARHGEF1,TCEA2,STRN4,NUP43,TMEM234,C12orf57,MCM7,POLD2,DAPK3,SART1,SHARPIN,DPM2,DYNC2I2,CNOT9,QPCTL,PLP2,HMCES,TMUB1,NCAPD2,RHNO1,PPP2R3B,BCS1L,NUP62,CTU1,ACD,XAB2,LMBR1L,TIMM17B,B3GAT3,CDCA5,ZBED4,SF3B3,WDCP,RCE1,CENATAC,SNRPA,PPP1R37,KCTD13,TIMELESS,CCDC14,INF2,CCNQ,E2F2,FAAP20,C6orf136,SF3A3,UBE2T,EIF2B5,VASP,PRKD2,ATXN7L3,EBNA1BP2,DOK1,VRK3,PPIH,MYBBP1A,RECQL4,KNTC1,KNSTRN,PAF1,SUGP1,TAZ,SPG7,STK39,NAA80,GINS2,C19orf44,SRSF4,BRICD5,ARHGAP19,CHAF1B,PSMD13,RCCD1,ERAL1,POLD1,CLK2,ILKAP,POLG2,DHX34,PRCC,TUT4,RBM15,CHKB,CEP89,METTL17,UROD,TMEM39B,TRIM11,SLC12A9,WDR83,OSGEP,USF1,WDR5,ITGB3BP,NASP,ANKRD39,DHPS,PRC1,NOC2L,BABAM1,BCL10,S100A10,ACYP1,TOMM40,ARHGAP11A,PIH1D1,IQGAP3,IFT172,MSH6,HELLS,CTU2,CC2D1B,CFAP298,B3GALT6,ANO8,DDX49,RBM42,ZWINT,ILF2,LPCAT4,NOC4L,CDC25C,C19orf54,CENPA,RACGAP1,MIIP,LPAR2,DDX51,DONSON,AGER,ESS2,TOP1MT,PRPF38A,MCM3,SPOUT1,SRSF2,C1orf52,CDK11A,SYMPK,PASK,TSEN54,VARS2,SUPT5H,UBE2C,IPO13,TOE1,ATG4B,CENPM,UBE2O,PAFAH1B3,CDKN2C,DAGLB,KIF23,FAM229A,BUB3,HROB,CDKN2D,SAE1,GIGYF1,GTSE1,TK1,FAM193B,CHEK1,PNKP,AATF,STK25,PAQR4,CZIB,NCAPG2,RABL6,CDCA7,PDRG1,KLHL17,ARHGAP33,C9orf40,ATXN2L,ELOF1,DNASE1,RPA3,HEXD,IFT122,HDAC8,DVL2,KDM1A,CCDC24,TOR2A,CCDC12,POLM,CCDC34,MRPL37,OTUD5,CDK5,CDCA3,CCNF,POC1A,IQCC,SKA2,TUBG1,FAAP100,SCNM1,TEDC2,RBBP7,ILF3,MED14,PES1,GLI4,CIZ1,SH2B1,CKAP2L,JMJD6,DCLRE1B,PHKA2,STK11,PPP1R12C,C1orf159,DDX56,PRR3,FAM98C,IP6K2,BOP1,SH3D21,PIF1,TRIM65,EIF2B4,TIMM44,C20orf96,DDX55,SMG5,ARFGAP1,CASP2,CAPN10,AP1G2,ARHGEF39,BANP,KIF4A,RPL37A,THOC1,UNC45A,PCLAF,NUTF2,MTA2,FANCA,GPN2,ACBD6,TNK2,INTS11,EZH2,MMP15,HDGF,UHRF1,MRM1,EEF1B2,AUNIP,FEN1,ABHD12,PIDD1,FAM189B,AP5Z1,SSRP1,CCDC137,EMD,RFWD3,LAS1L,NAA10,OIP5,TBC1D10B,CDH24,CABLES2,PCED1A,ABTB1,ORC1,NT5DC2,TBCB,PGP,MTA3,BRF1,REEP4,ACIN1,GNL2,NDC80,PRR7,THOC6,FOXM1,LEMD2,PTTG1,PQBP1,PRXL2B,TMEM186,MOGS,TADA2A,CEP85,PRMT7,ZFYVE19,WDR76,INPP5E,RSRP1,SLC35C2,REXO4,SGF29,CENPO,AURKA,TPGS2,ZSWIM1,CHRAC1,KIFC2,RNF220,STIL,HDAC2,CDCA8,UPF3B,TMPO,OGFR,PTOV1,PLEKHM2,HAUS1,RTN4R,DDX11,C2orf68,FBXL8,SPC24,NDUFAF7,ZNRF1,NOL4L,ANLN,KRTCAP2,TRIM28,SBF1,PRMT1,PPM1G,TMEM91,SPC25,GDI1,KIF18B,CNPY4,NOM1,RAD51,UCKL1,PSME3IP1,STK32C,SMYD3,UBXN11,CCNA2,TUBB,CDCA2,KHDC4,DCAF15,CROCC,CERS5,USF2,NCAPH2,RP9,RALY,SFPQ,FHOD1,MCM4,ENKD1,RFC2,ASCC2,SRSF7,LRRC14,IDH3G,TBRG4,CENPU,ATAT1,STMN1,NUDT1,EXO5,NCAPG,NUDC,TRMU,MYPOP,BICRA,POMT1,TACC3,ATXN7L2,ZNF598,STARD3,CHTF18,PHF19,CDPF1,CEP250,UBTF,ASPM,MSTO1,UIMC1,TJAP1,NAT14,MKS1,TAF4,C1orf35,TTI1,CDK5RAP1,BUD23,PIGC,NPRL2,KLHDC4,EFNA4,CCNL2,ZC4H2,CDC45,RRM2,POLE2,FBXO46,CLK3,DPH2,GFER,NUSAP1,CCDC77,CHTOP,TFAP4,SLC52A2,CCSAP,DSCC1,SGSM3,TP53I13,C1orf174,TYK2,INTS1,CDC25A,STX10,WDR62,DHX37,KAT2A,NEK2,TXNDC12,U2AF2,ANKS6,XRCC2,RNPS1,MCM10,JOSD1,SPATA2,DPY30,KIF20A,PPIE,FAM50A,SF3B6,CHMP1A,AURKB,CCDC22,CDK16,DTL,NDOR1,GEMIN6,MZT2B,ASF1B,HDAC10,HSF4,ANKS3,GON7,CBX4,DDA1,POLR2D,HECTD3,ANKRD54,MARCKSL1,TMEM201,RASSF7,RAD51C,KRI1,RNF25,BCL2L12,SCMH1,TMEM60,GPR35,ZSWIM4,SAC3D1,DYRK4,PKMYT1,R3HDM2,CENPS,ATAD2,NR2C2AP,MZT2A,UCK2,VIPAS39,DEPDC1,KIAA2013,WDR77,BRAT1,CDK2,PELP1,PSMG3,MEN1,DMWD,CAD,RIOX1,FAM234A,SZT2,POLE,KPTN,DTX3,ZMYND19,E2F1,SRGAP2,CKS1B,NAT9,SUV39H1,NKIRAS2,PCNA,CENPI,PNN,TRMT61A,DSN1,MAP2K7,PPAN,CHAF1A,CENPJ,C14orf93,DPH7,XRCC1,CBX8,TEX30,CKLF,UBE2M,CEP131,DUS1L,APEX2,NEURL4,HINFP,NR2C1,SLC19A1,CRTC2,RUVBL2,CNTROB,STX2,CYTH2,RCC2,IRF2BP1,RBM33,HCFC1,TONSL,BUB1,SRRT,AGAP6,RBM19,WRAP73,CHEK2,NELFB,CFDP1,RBM39,EDC3,UBE2I,IRF3,PYGO2,NRF1,TMEM44,SNRPD2,KAT8,HRAS,FZR1,PPP5C,CDC25B,RPP25,KIAA0895L,DDX39A,ATAD3B,HAUS8,GFUS,MUTYH,ZNF74,BANF1,HJURP,EME1,SRM,PEDS1,PYCR2,BIRC5,ADAM15,PHKG2,NARF,NUMBL,ASB6,SENP3,RFXANK,SUPT7L,ERCC2,CLN3,GRK6,C1orf216,CDCA4,PA2G4,CENPT,PACS2,S100PBP,MTG1,MRTO4,ZC3H3,ANAPC7,GTPBP3,LMF2,LSM4,RBMX,SNRPB,PCNT,C21orf58,TAF1C,RBM14,H2AZ2,GABRE,GPKOW,MYO19,WDR4,SAMD1,AAAS,CAPN15,SMPD4,CXXC1,HMGB2,LMNB2,HSF1,MED15,NSUN5,HAUS5,MCM6,DGAT1,HDAC7,CLN6,NINL,ENO2,GOLGA3,FBXL12,PRAF2,MCM8,TELO2,CDAN1,FBXL6,TEDC1,TRAIP,FAF1,AUP1,ANO9,SF3B4,PDAP1,DEDD2,USP21,GSK3A,TIGD1,RBM10,NSD2,E2F4,RPL36A,THAP3,NOL12,MAP7D1,CLASRP,MBD6,HMGN1,MICAL1,SPATA2L,COASY,SPATA33,RUSC1,SMG9,ABCC3,PRR11,TIMM29,TEX10,BAG6,PAM16,KIFC1,TCIRG1,SETD4,SPIRE2,TOP2A,CPSF3,CARD19,PSMC3IP,GMEB2,AXIN1,ANP32A,YPEL3,SAP30BP,VPS16,RAD18,ADPRS,TYMS,PIN1,THOC5,RHBDD3,CACNB3,WDR33,MTMR11,P3H1,PIGU,CHMP4B,NACC1,TIPIN,ASXL1,FOXD2,DENND4B,SIRT6,DXO,HSPB11,DPP9,MRPL38,LIG1,EMC8,LRRC45,SIRT7,TGFB1

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for FOXD2-AS1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

ACAT1,HIGD1A,PALMD,ELL2,IQGAP2

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000237424	ENST00000445551	exon_skip_44998	chr10:110132304-110132400	-12.15	-0.1992	ADD3	ENST00000356080	In-frame
ENSG00000237424	ENST00000445551	exon_skip_303809	chr19:18431352-18431418	-15.90	-0.2650	SSBP4	ENST00000270061	In-frame
ENSG00000237424	ENST00000445551	exon_skip_430633	chr4:82861630-82861708	-12.93	-0.2192	SEC31A	ENST00000355196,ENST00000395310,ENST00000448323	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000237424	ENST00000445551	exon_skip_96112	chr12:109945259-109945349	-17.23	-0.2076	GIT2	ENST00000355312	In-frame
ENSG00000237424	ENST00000445551	exon_skip_423688	chr4:53414614-53414722	-18.70	-0.1908	FIP1L1	ENST00000337488	In-frame

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for FOXD2-AS1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000237424	ENSG00000040608	RTN4R	BLCA,BRCA,HNSC,MESO,PAAD,SARC	BLCA,HNSC
ENSG00000237424	ENSG00000049541	RFC2	BLCA,BRCA,CHOL,GBM,HNSC,KIRC,LIHC,THYM,UCEC	BLCA,GBM,KIRC
ENSG00000237424	ENSG00000075702	WDR62	BLCA,DLBC,GBM,STAD,THYM,UCS	BLCA,GBM,STAD
ENSG00000237424	ENSG00000076003	MCM6	BLCA,CHOL,DLBC,GBM,HNSC,KIRP,LIHC,THYM	CHOL,GBM,LIHC
ENSG00000237424	ENSG00000080986	NDC80	BLCA,CHOL,DLBC,GBM,KIRC,LIHC,STAD,THYM	BLCA,CHOL,GBM,KIRC,LIHC,STAD
ENSG00000237424	ENSG00000085840	ORC1	BLCA,CESC,CHOL,DLBC,GBM,HNSC,LIHC,LUAD,LUSC,STAD,THYM,UCS	BLCA,CESC,CHOL,GBM,HNSC,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000092470	WDR76	BLCA,CHOL,DLBC,GBM,HNSC,LIHC,SARC,THYM,UCEC	BLCA,CHOL,GBM,HNSC,LIHC
ENSG00000237424	ENSG00000100479	POLE2	BLCA,DLBC,HNSC,LIHC,STAD,THYM	BLCA,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000109881	CCDC34	BLCA,CHOL,HNSC,STAD,THYM	BLCA,CHOL,STAD
ENSG00000237424	ENSG00000118655	DCLRE1B	BLCA,CHOL,GBM,LIHC,STAD	GBM
ENSG00000237424	ENSG00000119333	DYNC2I2	BLCA,BRCA,CHOL,HNSC,LIHC,STAD,THYM,UVM	BLCA
ENSG00000237424	ENSG00000119640	ACYP1	BLCA,BRCA,CESC,CHOL,DLBC,HNSC,KIRC,LIHC,LUSC,PAAD,READ,SARC,STAD,THYM,UCEC	BLCA,CESC,CHOL,LIHC
ENSG00000237424	ENSG00000132646	PCNA	BLCA,CESC,CHOL,HNSC,LIHC,SARC,STAD,THYM,UCEC	BLCA,CESC,LIHC,STAD
ENSG00000237424	ENSG00000132780	NASP	BLCA,BRCA,CESC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,SARC,STAD,THYM,UVM	CESC
ENSG00000237424	ENSG00000139880	CDH24	BLCA,BRCA,CHOL,GBM,HNSC,KIRC,LAML,LUAD,MESO,SARC,STAD	BLCA,CHOL,HNSC,KIRC,LUAD,STAD
ENSG00000237424	ENSG00000144354	CDCA7	BLCA,ESCA,GBM,HNSC,THYM	BLCA,GBM
ENSG00000237424	ENSG00000151287	TEX30	BLCA,GBM,HNSC,THYM,UCEC	BLCA,GBM
ENSG00000237424	ENSG00000159259	CHAF1B	BLCA,BRCA,CHOL,DLBC,GBM,HNSC,LIHC,LUAD,SARC,STAD,THYM,UCEC	BLCA,CHOL,LIHC,LUAD,STAD
ENSG00000237424	ENSG00000160753	RUSC1	BLCA,CHOL,ESCA,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,UCS	CHOL,LIHC,LUAD,LUSC
ENSG00000237424	ENSG00000177595	PIDD1	BLCA,CHOL,DLBC,HNSC,KIRC,LAML,LIHC,READ,STAD,THYM,UCEC,UVM	KIRC
ENSG00000237424	ENSG00000183856	IQGAP3	BLCA,BRCA,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,STAD	BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000196642	RABL6	BLCA,CHOL,COAD,LIHC,READ,STAD,THYM	CHOL
ENSG00000237424	ENSG00000237649	KIFC1	BLCA,BRCA,CESC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,STAD,THYM,UCS	BLCA,CESC,CHOL,GBM,HNSC,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000278259	MYO19	BLCA,CHOL,GBM,LIHC,LUAD,LUSC,PAAD,SARC,STAD	BLCA,CHOL,LIHC,LUAD,LUSC
ENSG00000237424	ENSG00000071859	FAM50A	BRCA,CHOL,ESCA,HNSC,KIRC,LIHC,LUAD,STAD,UCS,UVM	LIHC
ENSG00000237424	ENSG00000075218	GTSE1	BRCA,CHOL,GBM,HNSC,LIHC,LUAD,LUSC,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000093009	CDC45	BRCA,CHOL,DLBC,HNSC,LIHC,STAD,THYM	CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000100416	TRMU	BRCA,CHOL,GBM,HNSC,KIRC,LIHC,LUAD,LUSC,STAD,THYM	LUSC
ENSG00000237424	ENSG00000102125	TAZ	BRCA,CHOL,ESCA,HNSC,KIRC,LIHC,PAAD,STAD,THYM	KIRC,LIHC
ENSG00000237424	ENSG00000105011	ASF1B	BRCA,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,SARC,STAD,THYM	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,STAD
ENSG00000237424	ENSG00000106268	NUDT1	BRCA,CHOL,KIRC,LIHC,STAD,THYM,UCS	CHOL,KIRC,LIHC
ENSG00000237424	ENSG00000111665	CDCA3	BRCA,CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC
ENSG00000237424	ENSG00000123136	DDX39A	BRCA,CHOL,HNSC,KIRC,LUAD,STAD,THYM	CHOL,KIRC
ENSG00000237424	ENSG00000127564	PKMYT1	BRCA,CHOL,DLBC,HNSC,LIHC,LUAD,LUSC,PAAD,STAD,THYM	CHOL,HNSC,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000141858	SAMD1	BRCA,CHOL,COAD,GBM,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD,READ,STAD,THYM	CHOL,LUSC
ENSG00000237424	ENSG00000143793	C1orf35	BRCA,CHOL,DLBC,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD,STAD	LIHC,LUSC
ENSG00000237424	ENSG00000145014	TMEM44	BRCA,CHOL,COAD,KIRC,KIRP,LIHC,LUAD,PAAD	CHOL,KIRC,KIRP
ENSG00000237424	ENSG00000159147	DONSON	BRCA,CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,SARC,STAD,THYM,UCEC	GBM,KIRP,LUAD
ENSG00000237424	ENSG00000160298	C21orf58	BRCA,CESC,CHOL,DLBC,GBM,HNSC,LUSC,STAD,THYM	CESC,CHOL,GBM
ENSG00000237424	ENSG00000161888	SPC24	BRCA,CHOL,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,STAD,THYM	CHOL,HNSC,KIRC,KIRP,LIHC,LUAD,STAD
ENSG00000237424	ENSG00000162062	TEDC2	BRCA,CHOL,GBM,HNSC,KIRP,LIHC,LUAD,LUSC,PAAD,STAD,THYM	CHOL,HNSC,KIRP,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000163156	SCNM1	BRCA,CHOL,HNSC,KIRC,KIRP,LIHC,THYM,UCS,UVM	CHOL,LIHC
ENSG00000237424	ENSG00000164611	PTTG1	BRCA,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,THYM	GBM,HNSC,KIRC,KIRP,LIHC
ENSG00000237424	ENSG00000166508	MCM7	BRCA,CHOL,GBM,HNSC,KIRC,LIHC,THYM,UCS	CHOL,GBM,HNSC,LIHC
ENSG00000237424	ENSG00000167393	PPP2R3B	BRCA,DLBC,GBM,HNSC,LUAD,LUSC,MESO,STAD,THYM,UCS	LUAD,LUSC
ENSG00000237424	ENSG00000168496	FEN1	BRCA,CHOL,GBM,HNSC,LIHC,SARC,STAD,THYM	CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000170779	CDCA4	BRCA,DLBC,GBM,HNSC,KIRP,LIHC,THYM,UCS	GBM,HNSC,LIHC
ENSG00000237424	ENSG00000178999	AURKB	BRCA,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,STAD,THYM	GBM,HNSC,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000184162	NR2C2AP	BRCA,CHOL,HNSC,KIRC,KIRP,LIHC,PAAD,STAD	CHOL,KIRP,LIHC
ENSG00000237424	ENSG00000185347	TEDC1	BRCA,GBM,HNSC,LIHC,LUAD,PAAD,STAD,THYM	HNSC
ENSG00000237424	ENSG00000186185	KIF18B	BRCA,CHOL,DLBC,GBM,HNSC,LIHC,LUAD,LUSC,PAAD,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000273899	NOL12	BRCA,CHOL,HNSC,KIRC,LIHC,MESO,PAAD,TGCT,THYM	CHOL,KIRC,LIHC
ENSG00000237424	ENSG00000004777	ARHGAP33	CESC,CHOL,HNSC,KIRC,LAML,LIHC,LUAD,LUSC,MESO,STAD,THYM	CHOL,KIRC,LIHC,LUAD,LUSC
ENSG00000237424	ENSG00000117632	STMN1	CESC,CHOL,HNSC,LIHC,STAD,THYM	CESC,CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000123080	CDKN2C	CESC,CHOL,HNSC,LIHC,LUAD,THYM,UCEC	CESC,CHOL,LIHC
ENSG00000237424	ENSG00000131153	GINS2	CESC,CHOL,HNSC,KIRP,LIHC,THYM	CESC,CHOL,HNSC,KIRP,LIHC
ENSG00000237424	ENSG00000145191	EIF2B5	CESC,KIRC,LIHC,LUAD,PAAD,READ	CESC
ENSG00000237424	ENSG00000149636	DSN1	CESC,CHOL,ESCA,GBM,HNSC,LIHC,STAD,THYM	CESC,CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000158402	CDC25C	CESC,CHOL,DLBC,GBM,HNSC,LIHC,STAD,THYM,UCS	CESC,CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000160051	IQCC	CESC,CHOL,HNSC,LUSC,SARC,SKCM,STAD	CHOL
ENSG00000237424	ENSG00000162073	PAQR4	CESC,CHOL,KIRC,KIRP,LIHC,LUAD,PAAD,SARC	CESC,CHOL,KIRC,KIRP,LIHC,LUAD
ENSG00000237424	ENSG00000182685	BRICD5	CESC,KIRC,LUAD,SARC,THYM	CESC,KIRC
ENSG00000237424	ENSG00000010292	NCAPD2	CHOL,GBM,LIHC,STAD,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000014914	MTMR11	CHOL,ESCA,KIRC,PAAD,READ	CHOL,KIRC
ENSG00000237424	ENSG00000051180	RAD51	CHOL,DLBC,HNSC,LIHC,STAD,THYM	CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000057935	MTA3	CHOL,KIRP,LIHC,MESO,THYM	CHOL
ENSG00000237424	ENSG00000060491	OGFR	CHOL,KIRC,LIHC,PAAD,STAD,UVM	KIRC
ENSG00000237424	ENSG00000061273	HDAC7	CHOL,KIRC,LIHC,THYM,UVM	CHOL
ENSG00000237424	ENSG00000064490	RFXANK	CHOL,KIRC,LIHC,MESO,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000066279	ASPM	CHOL,GBM,LIHC,THYM,UCS	CHOL,GBM,LIHC
ENSG00000237424	ENSG00000070950	RAD18	CHOL,DLBC,ESCA,GBM,LIHC,THYM	GBM
ENSG00000237424	ENSG00000077152	UBE2T	CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,PAAD,THYM	CHOL,HNSC,KIRP,LIHC
ENSG00000237424	ENSG00000077463	SIRT6	CHOL,ESCA,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,PAAD,THYM,UVM	CHOL
ENSG00000237424	ENSG00000079462	PAFAH1B3	CHOL,HNSC,KIRP,MESO,STAD,THYM,UCS	CHOL
ENSG00000237424	ENSG00000084774	CAD	CHOL,GBM,KIRC,LUSC,STAD,UCS	CHOL,LUSC,STAD
ENSG00000237424	ENSG00000090971	NAT14	CHOL,HNSC,LAML,THYM,UVM	CHOL,HNSC
ENSG00000237424	ENSG00000099917	MED15	CHOL,GBM,KIRC,LAML,LIHC,UVM	CHOL
ENSG00000237424	ENSG00000100429	HDAC10	CHOL,HNSC,KIRC,LAML,LIHC,LUAD,PAAD,STAD,THYM,UCEC	KIRC
ENSG00000237424	ENSG00000101224	CDC25B	CHOL,KIRC,LIHC,TGCT,THYM	LIHC
ENSG00000237424	ENSG00000101464	PIGU	CHOL,ESCA,LIHC,STAD,UVM	LIHC
ENSG00000237424	ENSG00000102225	CDK16	CHOL,DLBC,GBM,LIHC,PAAD,STAD,UVM	CHOL
ENSG00000237424	ENSG00000102287	GABRE	CHOL,KIRC,LIHC,PAAD,SARC	CHOL,KIRC,LIHC
ENSG00000237424	ENSG00000102898	NUTF2	CHOL,DLBC,KIRC,KIRP,LIHC,PAAD,THYM	KIRP
ENSG00000237424	ENSG00000102977	ACD	CHOL,HNSC,KIRC,KIRP,LAML,LIHC,LUSC,PAAD,THYM,UVM	CHOL
ENSG00000237424	ENSG00000103126	AXIN1	CHOL,COAD,KIRC,KIRP,LIHC,LUAD,PAAD,READ	KIRP
ENSG00000237424	ENSG00000103326	CAPN15	CHOL,DLBC,ESCA,GBM,KIRC,LIHC,PAAD	KIRC
ENSG00000237424	ENSG00000104738	MCM4	CHOL,GBM,HNSC,LIHC,THYM	CHOL,GBM,HNSC,LIHC
ENSG00000237424	ENSG00000104859	CLASRP	CHOL,HNSC,KIRC,LIHC,LUAD,LUSC,MESO,PAAD,READ,STAD,TGCT,THYM	KIRC
ENSG00000237424	ENSG00000104866	PPP1R37	CHOL,HNSC,KIRC,LUAD,PAAD	CHOL
ENSG00000237424	ENSG00000105245	NUMBL	CHOL,KIRC,KIRP,LIHC,LUAD	CHOL,KIRP
ENSG00000237424	ENSG00000105287	PRKD2	CHOL,KIRC,KIRP,LIHC,PAAD,THYM,UVM	CHOL
ENSG00000237424	ENSG00000105443	CYTH2	CHOL,KIRC,LAML,LIHC,MESO,PAAD,THYM	CHOL
ENSG00000237424	ENSG00000105486	LIG1	CHOL,GBM,HNSC,KIRC,LIHC,LUAD,LUSC,STAD,THYM	CHOL,KIRC,LIHC,LUSC,STAD
ENSG00000237424	ENSG00000105771	SMG9	CHOL,ESCA,KIRC,LIHC,PAAD,SKCM,STAD,THYM,UCS,UVM	CHOL,LIHC
ENSG00000237424	ENSG00000106144	CASP2	CHOL,GBM,KIRC,LIHC,THYM	CHOL,GBM
ENSG00000237424	ENSG00000106462	EZH2	CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,PAAD,STAD,THYM	CHOL,GBM,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000108773	KAT2A	CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,PAAD,STAD	KIRC,KIRP,LIHC,LUAD
ENSG00000237424	ENSG00000108846	ABCC3	CHOL,ESCA,KIRC,KIRP,PAAD	KIRC,KIRP
ENSG00000237424	ENSG00000109065	NAT9	CHOL,HNSC,KIRC,LIHC,STAD	LIHC
ENSG00000237424	ENSG00000109685	NSD2	CHOL,KIRC,LIHC,STAD,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000111602	TIMELESS	CHOL,GBM,HNSC,LIHC,STAD,THYM	GBM,HNSC,STAD
ENSG00000237424	ENSG00000111674	ENO2	CHOL,HNSC,KIRC,KIRP,LIHC	CHOL,HNSC,KIRC,KIRP
ENSG00000237424	ENSG00000112118	MCM3	CHOL,DLBC,GBM,HNSC,LIHC,STAD,THYM	CHOL,GBM,LIHC,STAD
ENSG00000237424	ENSG00000112984	KIF20A	CHOL,GBM,KIRC,KIRP,LIHC,STAD,THYM,UCS	CHOL,GBM,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000115325	DOK1	CHOL,ESCA,LIHC,MESO,THYM	CHOL
ENSG00000237424	ENSG00000115687	PASK	CHOL,ESCA,READ,SARC,STAD	CHOL
ENSG00000237424	ENSG00000116871	MAP7D1	CHOL,KIRC,LAML,LIHC,THYM,UVM	CHOL
ENSG00000237424	ENSG00000117385	P3H1	CHOL,GBM,KIRC,KIRP,LIHC,THYM,UCS	GBM,KIRC
ENSG00000237424	ENSG00000117650	NEK2	CHOL,GBM,HNSC,LIHC,STAD,THYM	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000119969	HELLS	CHOL,GBM,HNSC,STAD,THYM	CHOL,GBM,HNSC,STAD
ENSG00000237424	ENSG00000120802	TMPO	CHOL,GBM,HNSC,LIHC,THYM	GBM
ENSG00000237424	ENSG00000121289	CEP89	CHOL,HNSC,KIRC,LIHC,MESO	CHOL
ENSG00000237424	ENSG00000122952	ZWINT	CHOL,GBM,HNSC,LIHC,PAAD,STAD,THYM	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000123374	CDK2	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,THYM	GBM
ENSG00000237424	ENSG00000123473	STIL	CHOL,ESCA,GBM,LUAD,LUSC,PAAD,SARC,STAD,THYM,UCS	CHOL,GBM,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000125319	HROB	CHOL,GBM,HNSC,LIHC,LUSC,STAD,THYM	CHOL,GBM,HNSC,LIHC,LUSC,STAD
ENSG00000237424	ENSG00000125351	UPF3B	CHOL,GBM,HNSC,KIRC,LIHC,LUAD,LUSC,PAAD,STAD	LUSC
ENSG00000237424	ENSG00000125459	MSTO1	CHOL,DLBC,GBM,KIRC,LIHC,STAD	CHOL,LIHC
ENSG00000237424	ENSG00000125753	VASP	CHOL,ESCA,KIRC,LIHC,PAAD,THYM	CHOL
ENSG00000237424	ENSG00000125835	SNRPB	CHOL,HNSC,KIRP,LIHC,MESO,PAAD,STAD,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000125885	MCM8	CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000126001	CEP250	CHOL,COAD,KIRC,LIHC,LUAD,LUSC,STAD,UCS	CHOL,LIHC,LUSC
ENSG00000237424	ENSG00000126453	BCL2L12	CHOL,HNSC,KIRC,KIRP,LIHC,THYM,UCS	HNSC
ENSG00000237424	ENSG00000126457	PRMT1	CHOL,KIRC,KIRP,LIHC,MESO	CHOL
ENSG00000237424	ENSG00000127586	CHTF18	CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD,READ,STAD,THYM,UVM	CHOL,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000130299	GTPBP3	CHOL,DLBC,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,STAD	LUSC
ENSG00000237424	ENSG00000131188	PRR7	CHOL,DLBC,KIRC,KIRP,LAML,LIHC	CHOL,KIRC,KIRP,LIHC
ENSG00000237424	ENSG00000131351	HAUS8	CHOL,GBM,HNSC,LUAD,THYM	GBM,HNSC
ENSG00000237424	ENSG00000131462	TUBG1	CHOL,GBM,LIHC,LUAD,PAAD	LIHC,LUAD
ENSG00000237424	ENSG00000131470	PSMC3IP	CHOL,GBM,HNSC,KIRC,LUAD,SARC	CHOL,GBM,HNSC
ENSG00000237424	ENSG00000131747	TOP2A	CHOL,GBM,HNSC,KIRP,LIHC,STAD,THYM,UCS	CHOL,GBM,HNSC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000132003	ZSWIM4	CHOL,GBM,KIRC,LAML,UVM	CHOL,GBM
ENSG00000237424	ENSG00000132680	KHDC4	CHOL,ESCA,HNSC,KIRC,LIHC,LUSC,PAAD	CHOL,LIHC,LUSC
ENSG00000237424	ENSG00000134690	CDCA8	CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,PAAD,STAD,THYM,UCS	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,STAD
ENSG00000237424	ENSG00000134779	TPGS2	CHOL,DLBC,GBM,LIHC,THYM	CHOL
ENSG00000237424	ENSG00000135723	FHOD1	CHOL,KIRC,KIRP,TGCT,UVM	CHOL,KIRC
ENSG00000237424	ENSG00000135845	PIGC	CHOL,ESCA,HNSC,KIRP,LIHC	CHOL,LIHC
ENSG00000237424	ENSG00000136982	DSCC1	CHOL,HNSC,LIHC,STAD,THYM	CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000137343	ATAT1	CHOL,DLBC,HNSC,KIRC,LIHC,STAD,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000137804	NUSAP1	CHOL,GBM,HNSC,KIRP,LIHC,PAAD,STAD,THYM	CHOL,GBM,HNSC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000137807	KIF23	CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000138002	IFT172	CHOL,ESCA,LIHC,PAAD,TGCT	CHOL
ENSG00000237424	ENSG00000138092	CENPO	CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000139624	CERS5	CHOL,HNSC,KIRC,KIRP,LIHC	CHOL
ENSG00000237424	ENSG00000139636	LMBR1L	CHOL,KIRC,LAML,LIHC,THYM	KIRC
ENSG00000237424	ENSG00000141569	TRIM65	CHOL,DLBC,KIRC,LIHC,UCS	CHOL,LIHC
ENSG00000237424	ENSG00000141570	CBX8	CHOL,GBM,HNSC,KIRC,LAML,LIHC,LUSC,STAD,THYM	CHOL,LIHC,LUSC
ENSG00000237424	ENSG00000142002	DPP9	CHOL,KIRC,LIHC,PAAD,READ	KIRC
ENSG00000237424	ENSG00000142046	TMEM91	CHOL,KIRC,LAML,LIHC,UCS	KIRC
ENSG00000237424	ENSG00000142330	CAPN10	CHOL,ESCA,KIRC,LAML,LIHC,LUAD,PAAD,READ,STAD,THYM	CHOL
ENSG00000237424	ENSG00000143179	UCK2	CHOL,GBM,KIRC,KIRP,LIHC	CHOL,LIHC
ENSG00000237424	ENSG00000143258	USP21	CHOL,KIRC,LAML,LIHC,LUAD,PAAD,UVM	CHOL,LIHC
ENSG00000237424	ENSG00000143476	DTL	CHOL,GBM,HNSC,LIHC,SARC,THYM	CHOL,GBM,HNSC,LIHC
ENSG00000237424	ENSG00000143537	ADAM15	CHOL,KIRC,KIRP,LIHC,PAAD	CHOL,LIHC
ENSG00000237424	ENSG00000145386	CCNA2	CHOL,DLBC,GBM,KIRC,KIRP,STAD,THYM,UCS	CHOL,GBM,KIRC,KIRP,STAD
ENSG00000237424	ENSG00000146918	NCAPG2	CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,GBM,LIHC,STAD
ENSG00000237424	ENSG00000149554	CHEK1	CHOL,GBM,KIRP,LIHC,STAD,THYM	CHOL,GBM,LIHC,STAD
ENSG00000237424	ENSG00000149679	CABLES2	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD	LUAD
ENSG00000237424	ENSG00000151725	CENPU	CHOL,HNSC,KIRP,LIHC,PAAD,THYM	CHOL,KIRP,LIHC
ENSG00000237424	ENSG00000152253	SPC25	CHOL,DLBC,HNSC,KIRC,LIHC,STAD,THYM,UCS	CHOL,HNSC,KIRC,LIHC,STAD
ENSG00000237424	ENSG00000154429	CCSAP	CHOL,HNSC,LIHC,THYM,UCS	LIHC
ENSG00000237424	ENSG00000157870	PRXL2B	CHOL,ESCA,LIHC,PAAD,STAD	CHOL
ENSG00000237424	ENSG00000158062	UBXN11	CHOL,DLBC,HNSC,KIRC,LIHC,PAAD,STAD,THYM	CHOL,KIRC
ENSG00000237424	ENSG00000160193	WDR4	CHOL,GBM,LIHC,LUSC,STAD	LUSC
ENSG00000237424	ENSG00000160767	FAM189B	CHOL,GBM,KIRC,KIRP,LIHC,LUAD,PAAD	CHOL,LIHC
ENSG00000237424	ENSG00000160949	TONSL	CHOL,DLBC,GBM,HNSC,KIRP,LIHC,PAAD,STAD	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000160959	LRRC14	CHOL,COAD,HNSC,KIRC,LIHC,STAD	LIHC
ENSG00000237424	ENSG00000161800	RACGAP1	CHOL,GBM,KIRP,LIHC,STAD,THYM,UCS	CHOL,GBM,LIHC,STAD
ENSG00000237424	ENSG00000163348	PYGO2	CHOL,ESCA,HNSC,LIHC,LUAD,LUSC,PAAD,UVM	CHOL,LIHC
ENSG00000237424	ENSG00000165138	ANKS6	CHOL,ESCA,LAML,LIHC,PAAD	CHOL,LIHC
ENSG00000237424	ENSG00000165752	STK32C	CHOL,HNSC,KIRC,KIRP,THYM	CHOL
ENSG00000237424	ENSG00000166803	PCLAF	CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,THYM	CHOL,GBM,HNSC,KIRC,KIRP,LIHC
ENSG00000237424	ENSG00000167523	SPATA33	CHOL,DLBC,HNSC,KIRC,PAAD,STAD,THYM	CHOL
ENSG00000237424	ENSG00000167535	CACNB3	CHOL,KIRC,LAML,PAAD,TGCT,THYM	CHOL
ENSG00000237424	ENSG00000167670	CHAF1A	CHOL,DLBC,GBM,HNSC,KIRC,LIHC,LUAD,STAD,THYM	CHOL,LIHC,LUAD
ENSG00000237424	ENSG00000167702	KIFC2	CHOL,KIRC,LAML,LIHC,PAAD,SARC,STAD,UCS	CHOL,KIRC,LIHC
ENSG00000237424	ENSG00000167900	TK1	CHOL,HNSC,KIRP,LIHC,THYM	CHOL,HNSC,KIRP,LIHC
ENSG00000237424	ENSG00000168061	SAC3D1	CHOL,GBM,HNSC,KIRP,LIHC,STAD,THYM,UCS	LIHC
ENSG00000237424	ENSG00000168096	ANKS3	CHOL,HNSC,KIRC,LIHC,PAAD,READ,SARC	CHOL,LIHC
ENSG00000237424	ENSG00000168268	NT5DC2	CHOL,DLBC,HNSC,KIRC,UCS	CHOL
ENSG00000237424	ENSG00000168411	RFWD3	CHOL,GBM,LIHC,LUSC,STAD,THYM	CHOL,GBM,LUSC
ENSG00000237424	ENSG00000168476	REEP4	CHOL,GBM,KIRC,KIRP,LAML	CHOL,GBM,KIRC,KIRP
ENSG00000237424	ENSG00000169221	TBC1D10B	CHOL,HNSC,KIRC,LIHC,LUAD,PAAD,STAD,THYM,UVM	CHOL
ENSG00000237424	ENSG00000169607	CKAP2L	CHOL,GBM,STAD,THYM,UCS	CHOL,GBM,STAD
ENSG00000237424	ENSG00000169679	BUB1	CHOL,GBM,HNSC,LIHC,STAD,THYM,UCS	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000171792	RHNO1	CHOL,GBM,HNSC,LIHC,THYM	CHOL,LIHC
ENSG00000237424	ENSG00000171960	PPIH	CHOL,HNSC,KIRC,LIHC,STAD,THYM,UCS	CHOL
ENSG00000237424	ENSG00000172534	HCFC1	CHOL,LIHC,STAD,THYM,UCS	CHOL
ENSG00000237424	ENSG00000173207	CKS1B	CHOL,DLBC,HNSC,KIRP,LIHC,THYM,UCS	CHOL,HNSC,LIHC
ENSG00000237424	ENSG00000173272	MZT2A	CHOL,DLBC,GBM,HNSC,KIRP,LAML,LUSC,THYM	KIRP,LUSC
ENSG00000237424	ENSG00000174943	KCTD13	CHOL,DLBC,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,PAAD,READ	CHOL,KIRC,KIRP
ENSG00000237424	ENSG00000175455	CCDC14	CHOL,HNSC,KIRC,LIHC,THYM	HNSC,KIRC
ENSG00000237424	ENSG00000175931	UBE2O	CHOL,KIRC,KIRP,LIHC,LUAD,LUSC,STAD	LUSC
ENSG00000237424	ENSG00000176454	LPCAT4	CHOL,KIRC,KIRP,LAML,LIHC,PAAD	CHOL
ENSG00000237424	ENSG00000176619	LMNB2	CHOL,KIRC,KIRP,LIHC,STAD,THYM,UCS	CHOL,LIHC,STAD
ENSG00000237424	ENSG00000177084	POLE	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,READ,STAD,THYM,UVM	GBM,LUSC
ENSG00000237424	ENSG00000178623	GPR35	CHOL,ESCA,LAML,PAAD,READ,STAD	CHOL
ENSG00000237424	ENSG00000179051	RCC2	CHOL,GBM,KIRC,KIRP,LIHC,LUAD,PAAD,STAD	CHOL,GBM,STAD
ENSG00000237424	ENSG00000182173	TSEN54	CHOL,ESCA,HNSC,LIHC,LUAD,PAAD,STAD	CHOL,LIHC
ENSG00000237424	ENSG00000182325	FBXL6	CHOL,HNSC,KIRC,KIRP,LAML,PAAD,READ,STAD,THYM	HNSC,KIRC
ENSG00000237424	ENSG00000184207	PGP	CHOL,HNSC,LIHC,PAAD,THYM	LIHC
ENSG00000237424	ENSG00000184428	TOP1MT	CHOL,GBM,HNSC,KIRC,STAD,THYM	STAD
ENSG00000237424	ENSG00000184445	KNTC1	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUSC,STAD,THYM	CHOL,GBM,HNSC,KIRC,KIRP,LIHC,LUSC,STAD
ENSG00000237424	ENSG00000185101	ANO9	CHOL,COAD,ESCA,PAAD,READ,STAD	CHOL
ENSG00000237424	ENSG00000185803	SLC52A2	CHOL,KIRC,KIRP,LIHC,PAAD,STAD	CHOL,LIHC,STAD
ENSG00000237424	ENSG00000185917	SETD4	CHOL,HNSC,KIRC,LIHC,PAAD	CHOL
ENSG00000237424	ENSG00000186166	CENATAC	CHOL,ESCA,KIRC,LIHC,PAAD,THYM	KIRC
ENSG00000237424	ENSG00000187741	FANCA	CHOL,ESCA,GBM,HNSC,LUAD,LUSC,READ,STAD,TGCT,THYM	CHOL,GBM,HNSC,LUAD,LUSC,STAD
ENSG00000237424	ENSG00000187961	KLHL17	CHOL,KIRC,LAML,LIHC,LUAD,PAAD,STAD,THYM	KIRC,LUAD
ENSG00000237424	ENSG00000188566	NDOR1	CHOL,KIRC,LIHC,SARC,THYM	LIHC
ENSG00000237424	ENSG00000188603	CLN3	CHOL,COAD,ESCA,LIHC,THYM,UVM	LIHC
ENSG00000237424	ENSG00000196123	KIAA0895L	CHOL,HNSC,KIRC,LAML,LIHC,LUAD	KIRC
ENSG00000237424	ENSG00000196230	TUBB	CHOL,DLBC,GBM,HNSC,KIRC,LIHC,STAD,THYM	GBM
ENSG00000237424	ENSG00000196476	C20orf96	CHOL,ESCA,LIHC,MESO,STAD	CHOL,LIHC
ENSG00000237424	ENSG00000197183	NOL4L	CHOL,ESCA,GBM,LIHC,PAAD,STAD,THYM	CHOL
ENSG00000237424	ENSG00000197747	S100A10	CHOL,KIRC,KIRP,LIHC,PAAD,UVM	CHOL,KIRP,LIHC
ENSG00000237424	ENSG00000198648	STK39	CHOL,DLBC,ESCA,PAAD,UVM	CHOL
ENSG00000237424	ENSG00000198826	ARHGAP11A	CHOL,GBM,HNSC,LIHC,STAD,THYM	CHOL,GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000198901	PRC1	CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LIHC,SARC,THYM,UCS	CHOL,GBM,HNSC,KIRC,KIRP,LIHC
ENSG00000237424	ENSG00000198952	SMG5	CHOL,COAD,ESCA,LIHC,LUAD,PAAD,STAD,UVM	LIHC
ENSG00000237424	ENSG00000204149	AGAP6	CHOL,ESCA,HNSC,KIRC,LIHC,TGCT	KIRC
ENSG00000237424	ENSG00000204305	AGER	CHOL,HNSC,KIRC,LIHC,THYM	CHOL,KIRC
ENSG00000237424	ENSG00000205581	HMGN1	CHOL,GBM,HNSC,LIHC,STAD,THYM	GBM
ENSG00000237424	ENSG00000214193	SH3D21	CHOL,KIRC,PAAD,TGCT,UCS	CHOL,KIRC
ENSG00000237424	ENSG00000217930	PAM16	CHOL,DLBC,HNSC,KIRC,PAAD	KIRC
ENSG00000237424	ENSG00000230124	ACBD6	CHOL,HNSC,KIRC,KIRP,LIHC	CHOL,LIHC
ENSG00000237424	ENSG00000241343	RPL36A	CHOL,HNSC,KIRC,MESO,THYM,UCS	CHOL,KIRC
ENSG00000237424	ENSG00000242802	AP5Z1	CHOL,ESCA,KIRC,LIHC,PAAD,STAD,THYM,UVM	LIHC
ENSG00000237424	ENSG00000243364	EFNA4	CHOL,KIRP,LAML,PAAD,TGCT	CHOL
ENSG00000237424	ENSG00000256525	POLG2	CHOL,ESCA,HNSC,KIRC,KIRP,LIHC	KIRC,KIRP
ENSG00000237424	ENSG00000261236	BOP1	CHOL,GBM,KIRC,KIRP,LAML,STAD	STAD
ENSG00000237424	ENSG00000167930	FAM234A	COAD,KIRP,PAAD,READ,TGCT	KIRP
ENSG00000237424	ENSG00000175130	MARCKSL1	COAD,ESCA,KIRC,LUAD,PAAD,READ,STAD,THYM	LUAD
ENSG00000237424	ENSG00000024526	DEPDC1	DLBC,GBM,STAD,THYM,UCS	GBM,STAD
ENSG00000237424	ENSG00000065328	MCM10	DLBC,GBM,HNSC,STAD,THYM	GBM,HNSC,STAD
ENSG00000237424	ENSG00000068489	PRR11	DLBC,GBM,LIHC,STAD,THYM,UCS	GBM,LIHC,STAD
ENSG00000237424	ENSG00000104147	OIP5	DLBC,LIHC,PAAD,STAD,THYM,UCS	LIHC,STAD
ENSG00000237424	ENSG00000127423	AUNIP	DLBC,GBM,HNSC,STAD,THYM,UCS	HNSC,STAD
ENSG00000237424	ENSG00000140451	PIF1	DLBC,GBM,HNSC,STAD,THYM	GBM,HNSC,STAD
ENSG00000237424	ENSG00000164045	CDC25A	DLBC,GBM,HNSC,LIHC,STAD,THYM	GBM,LIHC,STAD
ENSG00000237424	ENSG00000164104	HMGB2	DLBC,GBM,HNSC,LIHC,LUAD,THYM	GBM,LIHC
ENSG00000237424	ENSG00000167962	ZNF598	DLBC,GBM,KIRC,KIRP,LIHC,LUSC,PAAD,STAD	LUSC
ENSG00000237424	ENSG00000188807	TMEM201	DLBC,GBM,HNSC,LIHC,LUAD,MESO,STAD,UCS,UVM	LIHC
ENSG00000237424	ENSG00000196584	XRCC2	DLBC,GBM,HNSC,STAD,THYM	GBM,HNSC,STAD
ENSG00000237424	ENSG00000203485	INF2	DLBC,ESCA,KIRC,PAAD,UCEC	KIRC
ENSG00000237424	ENSG00000044446	PHKA2	ESCA,GBM,HNSC,KIRC,LIHC,THYM	KIRC
ENSG00000237424	ENSG00000117616	RSRP1	ESCA,HNSC,KIRC,LIHC,PAAD	KIRC
ENSG00000237424	ENSG00000160072	ATAD3B	ESCA,GBM,HNSC,KIRC,LIHC,PAAD,STAD	KIRC,STAD
ENSG00000237424	ENSG00000221978	CCNL2	ESCA,KIRC,LIHC,PAAD,STAD	KIRC
ENSG00000237424	ENSG00000087586	AURKA	GBM,HNSC,KIRP,LIHC,STAD,THYM,UCS	GBM,HNSC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000102384	CENPI	GBM,HNSC,STAD,THYM,UCS	GBM,HNSC,STAD
ENSG00000237424	ENSG00000123485	HJURP	GBM,HNSC,LIHC,LUAD,STAD,THYM,UCS	GBM,HNSC,LIHC,LUAD,STAD
ENSG00000237424	ENSG00000126787	DLGAP5	GBM,HNSC,LIHC,STAD,THYM,UCS	GBM,HNSC,LIHC,STAD
ENSG00000237424	ENSG00000128944	KNSTRN	GBM,HNSC,KIRP,LIHC,STAD,THYM	HNSC,STAD
ENSG00000237424	ENSG00000154920	EME1	GBM,HNSC,STAD,THYM,UCS	GBM,HNSC,STAD
ENSG00000237424	ENSG00000156802	ATAD2	GBM,HNSC,KIRP,THYM,UCS	GBM,HNSC
ENSG00000237424	ENSG00000162063	CCNF	GBM,LIHC,LUAD,PAAD,STAD,THYM,UCS	LIHC,LUAD,STAD
ENSG00000237424	ENSG00000173638	SLC19A1	GBM,HNSC,KIRC,KIRP,STAD	HNSC
ENSG00000237424	ENSG00000175063	UBE2C	GBM,HNSC,KIRC,KIRP,LIHC,PAAD,STAD,THYM	GBM,HNSC,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000183765	CHEK2	GBM,HNSC,KIRC,KIRP,LIHC,STAD	GBM,KIRC,KIRP,STAD
ENSG00000237424	ENSG00000184661	CDCA2	GBM,HNSC,STAD,THYM,UCS	GBM,HNSC,STAD
ENSG00000237424	ENSG00000061938	TNK2	HNSC,KIRC,LAML,LUAD,PAAD,READ,TGCT	KIRC
ENSG00000237424	ENSG00000089685	BIRC5	HNSC,KIRC,KIRP,LIHC,STAD,THYM,UCS	HNSC,KIRC,KIRP,LIHC,STAD
ENSG00000237424	ENSG00000164087	POC1A	HNSC,KIRP,LIHC,PAAD,STAD,THYM,UCS	LIHC
ENSG00000237424	ENSG00000217555	CKLF	HNSC,KIRC,KIRP,LIHC,PAAD,THYM	KIRC,KIRP,LIHC
ENSG00000237424	ENSG00000076928	ARHGEF1	KIRC,LAML,LIHC,THYM,UVM	KIRC
ENSG00000237424	ENSG00000100241	SBF1	KIRC,LIHC,LUAD,TGCT,THYM,UVM	LIHC
ENSG00000237424	ENSG00000100288	CHKB	KIRC,LIHC,STAD,THYM,UVM	KIRC
ENSG00000237424	ENSG00000105329	TGFB1	KIRC,KIRP,LAML,MESO,UVM	KIRC
ENSG00000237424	ENSG00000135596	MICAL1	KIRC,LIHC,READ,THYM,UVM	KIRC,LIHC
ENSG00000237424	ENSG00000135722	FBXL8	KIRC,LAML,PAAD,READ,THYM,UCS	KIRC
ENSG00000237424	ENSG00000011426	ANLN	KIRP,LIHC,STAD,THYM,UCS	KIRP,LIHC,STAD
ENSG00000237424	ENSG00000171848	RRM2	KIRP,LIHC,STAD,THYM,UCS	KIRP,LIHC,STAD
ENSG00000237424	ENSG00000141582	CBX4	LIHC,LUAD,PAAD,STAD,TGCT	LUAD

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000237424	ENST00000445551	ACAT1	ENSG00000075239	ENST00000528370	-0.1018	1937	-	CHOL,KIRC,BLCA,CESC,HNSC,LIHC
ENSG00000237424	ENST00000445551	PALMD	ENSG00000099260	ENST00000605497	-0.1199	1560	-	CHOL,HNSC,LUSC,LUAD
ENSG00000237424	ENST00000445551	ELL2	ENSG00000118985	ENST00000508757	-0.2274	128	-	CHOL,BLCA,STAD
ENSG00000237424	ENST00000445551	IQGAP2	ENSG00000145703	ENST00000396234	-0.1016	1670	-	CHOL,KIRC,HNSC,KIRP,LUSC
ENSG00000237424	ENST00000445551	IQGAP2	ENSG00000145703	ENST00000513534	-0.1244	1143	-	CHOL,KIRC,HNSC,KIRP,LUSC
ENSG00000237424	ENST00000445551	HIGD1A	ENSG00000181061	ENST00000452906	-0.6073	153	-	CHOL,KIRC

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000237424.1	ENST00000445551.1	52	157	2

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential