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lncRNA: ENSG00000236924 |
Summary for RP11-390F4.6 |
Gene summary |
Gene information | Ensembl ID | ENSG00000236924 | Gene symbol | RP11-390F4.6 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-390F4.6 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000236924 | 6.325987e+01 | 1.707859e+00 | 4.813492e-01 | 3.548065e+00 | 3.880720e-04 | 1.637789e-03 | UP | GBM |
ENSG00000236924 | 3.187930e+01 | -1.326725e+00 | 2.877941e-01 | -4.609980e+00 | 4.030000e-06 | 1.400000e-05 | DOWN | THCA |
ENSG00000236924 | 1.614712e+01 | 1.971060e+00 | 4.072473e-01 | 4.839958e+00 | 1.300000e-06 | 5.350000e-06 | UP | UCEC |
ENSG00000236924 | 6.389555e+01 | 1.720550e+00 | 2.580629e-01 | 6.667173e+00 | 2.610000e-11 | 2.160000e-10 | UP | PRAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000236924 | -3.127760e-01 | 2.603445e-14 | THCA | 3.285299e-13 |
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lncRNA-Protein interaction for RP11-390F4.6 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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