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lncRNA: ENSG00000236882 |
Summary for LINC01554 |
Gene summary |
Gene information | Ensembl ID | ENSG00000236882 | Gene symbol | LINC01554 |
Gene name | long intergenic non-protein coding RNA 1554 | |
HGNC | 24687 | |
Entrez ID | 202299 | |
Gene type | lincRNA | |
Synonyms | 05q15|LINC01554 | |
UniProtAcc | Q52M75 |
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Structure and expression level for LINC01554 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000236882 | 1.213552e+03 | -6.791691e+00 | 8.449062e-01 | -8.038397e+00 | 9.100000e-16 | 2.530000e-14 | DOWN | CHOL |
ENSG00000236882 | 3.958055e+02 | 1.411619e+00 | 3.054102e-01 | 4.622043e+00 | 3.800000e-06 | 8.530000e-06 | UP | KIRC |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000236882 | -5.226523e-01 | 2.304336e-04 | CHOL | 5.615653e-04 |
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lncRNA-Protein interaction for LINC01554 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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