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lncRNA: ENSG00000236481 |
Summary for LINC02195 |
Gene summary |
Gene information | Ensembl ID | ENSG00000236481 | Gene symbol | LINC02195 |
Gene name | long intergenic non-protein coding RNA 2195 | |
HGNC | 53058 | |
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | AC002331.1|LINC02195|16p12.1 | |
UniProtAcc |
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Structure and expression level for LINC02195 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000236481 | 1.878380e+01 | 1.969100e+00 | 5.254911e-01 | 3.747162e+00 | 1.788460e-04 | 8.668090e-04 | UP | BLCA |
ENSG00000236481 | 2.055198e+01 | 1.896616e+00 | 2.491564e-01 | 7.612152e+00 | 2.700000e-14 | 3.190000e-13 | UP | HNSC |
ENSG00000236481 | 1.875980e+01 | 1.307471e+00 | 2.503038e-01 | 5.223536e+00 | 1.760000e-07 | 5.050000e-07 | UP | LUSC |
ENSG00000236481 | 1.594136e+01 | 1.880423e+00 | 2.529075e-01 | 7.435218e+00 | 1.040000e-13 | 6.620000e-13 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC02195 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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