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lncRNA: ENSG00000235978 |
Summary for AC018816.3 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235978 | Gene symbol | AC018816.3 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for AC018816.3 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235978 | 2.045759e+02 | 3.128134e+00 | 1.729129e-01 | 1.809081e+01 | 3.770000e-73 | 9.360000e-71 | UP | THCA |
| ENSG00000235978 | 7.608418e+01 | 1.620913e+00 | 1.379487e-01 | 1.175011e+01 | 7.050000e-32 | 7.870000e-31 | UP | KIRC |
| ENSG00000235978 | 7.085018e+01 | 1.516713e+00 | 2.312791e-01 | 6.557933e+00 | 5.460000e-11 | 4.530000e-10 | UP | KIRP |
| ENSG00000235978 | 5.208977e+01 | 1.081322e+00 | 2.626961e-01 | 4.116247e+00 | 3.850000e-05 | 1.275690e-04 | UP | PRAD |
| ENSG00000235978 | 3.740915e+02 | 3.249724e+00 | 2.150249e-01 | 1.511324e+01 | 1.320000e-51 | 2.980000e-50 | UP | BRCA |
| ENSG00000235978 | 6.048237e+01 | 1.517610e+00 | 1.830684e-01 | 8.289853e+00 | 1.130000e-16 | 9.000000e-16 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000235978 | 3.904094e-01 | 1.425455e-23 | KIRC | 1.886632e-22 |
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lncRNA-Protein interaction for AC018816.3 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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