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lncRNA: ENSG00000234147 |
Summary for RP3-460G2.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000234147 | Gene symbol | RP3-460G2.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP3-460G2.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000234147 | 1.426466e+02 | 5.545578e+00 | 8.594848e-01 | 6.452212e+00 | 1.100000e-10 | 2.180000e-09 | UP | GBM |
| ENSG00000234147 | 4.545855e+01 | 2.672230e+00 | 3.046495e-01 | 8.771490e+00 | 1.760000e-18 | 3.190000e-17 | UP | HNSC |
| ENSG00000234147 | 3.421032e+01 | -1.388764e+00 | 1.988745e-01 | -6.983118e+00 | 2.890000e-12 | 1.630000e-11 | DOWN | LUAD |
| ENSG00000234147 | 1.550059e+01 | 1.123996e+00 | 3.694292e-01 | 3.042520e+00 | 2.346064e-03 | 5.166206e-03 | UP | COAD |
| ENSG00000234147 | 2.964410e+01 | 2.530627e+00 | 3.953533e-01 | 6.400924e+00 | 1.540000e-10 | 1.000000e-09 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for RP3-460G2.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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