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lncRNA: ENSG00000233705 |
Summary for SLC26A4-AS1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000233705 | Gene symbol | SLC26A4-AS1 |
Gene name | SLC26A4 antisense RNA 1 | |
HGNC | 22385 | |
Entrez ID | ||
Gene type | antisense | |
Synonyms | SLC26A4-AS1|07q22.3 | |
UniProtAcc |
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Structure and expression level for SLC26A4-AS1 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000233705 | 2.333024e+04 | -1.001274e+00 | 2.903794e-01 | -3.448157e+00 | 5.644270e-04 | 1.420545e-03 | DOWN | THCA |
ENSG00000233705 | 3.903606e+02 | 4.786318e+00 | 4.871150e-01 | 9.825846e+00 | 8.710000e-23 | 1.840000e-21 | UP | KICH |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000233705 | 4.018547e-01 | 9.485741e-05 | KICH | 1.610684e-04 |
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lncRNA-Protein interaction for SLC26A4-AS1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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