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lncRNA: ENSG00000232931

Summary for LINC00342

Gene summary

Gene information	Ensembl ID	ENSG00000232931
	Gene symbol	LINC00342
	Gene name	long intergenic non-protein coding RNA 342
	HGNC	42470
	Entrez ID
	Gene type	lincRNA
	Synonyms	02q11.1\|LINC00342
	UniProtAcc

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Structure and expression level for LINC00342

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000232931	4.661742e+02	1.767738e+00	3.275592e-01	5.396698e+00	6.790000e-08	5.580000e-07	UP	CHOL
ENSG00000232931	4.197616e+02	2.368496e+00	1.437015e-01	1.648205e+01	4.940000e-61	1.770000e-59	UP	KIRC
ENSG00000232931	2.127214e+02	1.120549e+00	2.073025e-01	5.405381e+00	6.470000e-08	2.890000e-07	UP	KICH
ENSG00000232931	4.005606e+02	1.675663e+00	2.433038e-01	6.887122e+00	5.690000e-12	5.370000e-11	UP	KIRP
ENSG00000232931	8.827495e+02	2.254737e+00	5.560708e-01	4.054765e+00	5.020000e-05	1.017558e-03	UP	PCPG
ENSG00000232931	3.230720e+02	1.310015e+00	1.251901e-01	1.046421e+01	1.260000e-25	6.670000e-24	UP	PRAD
ENSG00000232931	1.025878e+03	2.048214e+00	2.353702e-01	8.702095e+00	3.260000e-18	2.900000e-17	UP	LUAD

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000232931	6.475972e-01	1.522371e-06	CHOL	2.415687e-05
ENSG00000232931	3.554374e-01	7.498701e-18	PRAD	1.082901e-16

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lncRNA-Protein interaction for LINC00342

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000123636	BAZ2B	92.52	93.2687	Q9UIF8	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000076108	BAZ2A	56.97	90.978	Q9UIF9	TF,RBP,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000168769	TET2	54.12	93.6863	Q6N021	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000124151	NCOA3	37.6	91.9601	Q9Y6Q9	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000118058	KMT2A	74.28	95.9339	Q03164	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000116731	PRDM2	61.72	90.4241	Q13029	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000104885	DOT1L	55.64	94.3534	Q8TEK3	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000171634	BPTF	51.99	91.4274	Q12830	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000083544	TDRD3	22.97	90.291	Q9H7E2	RBP,Epi	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000138376	BARD1	47.18	94.3977	Q99728	RBP,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000123636	BAZ2B	92.52	93.2086	Q9UIF8	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000118058	KMT2A	74.28	95.9144	Q03164	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000130254	SAFB2	69.11	92.3015	Q14151	TF,RBP	ENCODE,eCLIP
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000181827	RFX7	63.88	91.551	Q2KHR2	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000116731	PRDM2	61.72	90.5164	Q13029	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000076108	BAZ2A	56.97	90.9692	Q9UIF9	TF,RBP,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000104885	DOT1L	55.64	94.3759	Q8TEK3	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000147124	ZNF41	55.58	90.7963	P51814	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000168769	TET2	54.12	93.8477	Q6N021	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000171634	BPTF	51.99	91.367	Q12830	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000167232	ZNF91	48.57	93.1598	Q05481	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000117000	RLF	44.77	91.9195	Q13129	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000126804	ZBTB1	38.7	91.1564	Q9Y2K1	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000124151	NCOA3	37.6	91.8311	Q9Y6Q9	TF,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000125812	GZF1	35.03	91.5508	Q9H116	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000124459	ZNF45	34.65	91.8218	Q02386	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000168795	ZBTB5	27.87	91.0538	O15062	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000186272	ZNF17	22.99	90.4867	P17021	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000256223	ZNF10	7.92	90.1083	P21506	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000175395	ZNF25	2.49	91.1777	P17030	TF	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000275111	ZNF2	2.14	90.1046	Q9BSG1	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000168152	THAP9	71.18	94.3546	Q9H5L6	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000175727	MLXIP	66.15	94.8072	Q9HAP2	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000100426	ZBED4	48.77	92.5595	O75132	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000141258	SGSM2	41.61	90.3364	O43147	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000176182	MYPOP	36.04	92.9198	Q86VE0	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000143157	POGK	19.01	94.0481	Q9P215	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000213928	IRF9	16.1	91.436	Q00978	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000143390	RFX5	11.01	93.7348	P48382	TF	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000158711	ELK4	2.95	90.7296	P28324	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000176102	CSTF3	50.72	90.9986	Q12996	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000129566	TEP1	49.86	95.8687	Q99973	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000138376	BARD1	47.18	94.4926	Q99728	RBP,Epi	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000162408	NOL9	34.81	91.2449	Q5SY16	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000162231	NXF1	28.01	93.6038	Q9UBU9	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000110367	DDX6	22.05	91.1995	P26196	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000118197	DDX59	21.75	93.9229	Q5T1V6	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000155636	RBM45	18.81	92.9269	Q8IUH3	RBP	NA
ENSG00000232931	ENST00000448494	LINC00342	ENSG00000149532	CPSF7	18.08	90.0338	Q8N684	RBP	PAR-CLIP
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000130254	SAFB2	69.11	91.5466	Q14151	TF,RBP	ENCODE,eCLIP
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000004534	RBM6	67.38	91.0497	P78332	RBP	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000198000	NOL8	63.46	92.4209	Q76FK4	RBP	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000137776	SLTM	59.17	92.0363	Q9NWH9	RBP	ENCODE,eCLIP
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000076108	BAZ2A	56.97	90.8306	Q9UIF9	TF,RBP,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000133226	SRRM1	24.16	94.4609	Q8IYB3	RBP	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000083544	TDRD3	22.97	90.8812	Q9H7E2	RBP,Epi	NA
ENSG00000232931	ENST00000412393	LINC00342	ENSG00000167978	SRRM2	19.87	96.81	Q9UQ35	RBP	NA

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lncRNA-DNA interaction for LINC00342

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

ZNF30,DNMT1,PUM1,XRN1,ILF3,GLI4,PBX2,RBM39,EDC3,KLF12,MYPOP,CIRBP,MZF1,HES1,NRF1,RFX5,AKAP8,ZNF2,ARID2,ZXDC,SUGP2,DMTF1,VEZF1,RBM27,ZNF70,BAZ2A,ZNF24,ATF6B,ZNF74,TBP,GABPA,IKZF5,ZBED4,KMT2B,TET3,ZBTB5,ZFP14,RNPC3,ZFP69,BARD1,SAFB2,THOC1,ZNF25,MNT,TRNT1,SON,CHTOP,CWC22,DDX59,TFAP4,ZZZ3,ZBED5,SCAF4,CENPT,TTC14,MEX3C,CREB1,RC3H1,SUGP1,ZNF44,ZNF91,SRSF4,RBMX,AGO2,RBM4B,CSTF3,RBM26,CPSF1,RFX2,PURB,ADNP,GZF1,MYEF2,MBD1,CWC15,IKZF4,ASH1L,DHX34,CASC3,FUBP1,RBM43,CPSF7,UBR5,THAP9,THOC2,DDX6,USF1,CXXC1,ZNF34,ZNF71,THAP6,MOV10,DDX17,E2F5,SRRM2,RFX7,AQR,ZNF22,LCOR,FMR1,MECP2,PHF1,FOXJ3,THYN1,ZNF41,ZC3H8,HSF4,RBM41,SART3,NOL9,DZIP3,ZFP62,SGSM2,SMAD3,WIZ,ZNF45,CELF1,SCMH1,KRR1,TMF1,ELK4,TIGD1,RBM45,PRDM2,RBM10,MBD4,AGO3,PCBP4,UNC50,NFIB,FOXP1,MBD6,ZGPAT,MYNN,TFCP2,PBX4,ZMAT1,ZNF83,RFX3,NXF1,ZFX,ZNF8,ZNF18,NKRF,EIF2D,NR2C2,DDX11,GPBP1,RBM6,HMGN3,ZNF14,RBM48,GMEB2,NOL3,PUM2,XPO1,RBM5,ELF2,SMAD4,NFYB,ZNF43,PTBP3,ZFP28,SP3,ZNF17,SRCAP,DOT1L,ZNF84,DDX42,BAZ2B,RXRB,TRA2A,KMT2A,ZNF69,HINFP,XPA,NR2C1,ZFP3,TEP1,MAX,SFPQ,ETV3,TET2,RBM33,NOL8,ATF2,ZNF10

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for LINC00342

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000232931	ENST00000448494	exon_skip_1234	chr1:11658532-11658628	-15.00	-0.1705	FBXO44	ENST00000251547,ENST00000376770	In-frame
ENSG00000232931	ENST00000448494	exon_skip_470077	chr7:102397619-102397698	-12.59	-0.1825	PRKRIP1	ENST00000397912,ENST00000496391	Frame-shift

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000232931	ENST00000448494	exon_skip_9446	chr1:147270931-147271005	-9.46	-0.1819	CHD1L	ENST00000369258	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_59071	chr11:47234756-47234934	-19.43	-0.1270	DDB2	ENST00000256996	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_62623	chr11:69079833-69079883	-11.35	-0.3547	TPCN2	ENST00000294309	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_66482	chr11:126274926-126275021	-12.20	-0.1419	FOXRED1	ENST00000263578	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_111863	chr14:23565815-23565892	-11.41	-0.1654	AP1G2	ENST00000308724,ENST00000397120	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_114365	chr14:74290026-74290118	-12.62	-0.1418	ABCD4	ENST00000356924	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_319223	chr19:43526200-43526349	-17.13	-0.1328	ETHE1	ENST00000292147	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_327433	chr2:86125794-86125880	-8.85	-0.2529	PTCD3	ENST00000254630	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_370518	chr22:50247691-50247776	-14.50	-0.1726	HDAC10	ENST00000216271	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_377198	chr3:123130479-123130616	-14.57	-0.1071	PDIA5	ENST00000316218	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_382458	chr3:38131595-38131638	-12.67	-0.4087	ACAA1	ENST00000333167	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_446758	chr5:178212972-178213103	-20.19	-0.1697	PHYKPL	ENST00000308158	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_470226	chr7:103307595-103307708	-12.75	-0.1386	PMPCB	ENST00000249269	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_41813	chr10:68337857-68337996	-15.94	-0.1362	HNRNPH3	ENST00000265866	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_4796	chr1:41007448-41007545	-13.07	-0.1676	CTPS1	ENST00000372616,ENST00000372621	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_11029	chr1:154989559-154989707	-23.99	-0.1714	FLAD1	ENST00000292180	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_16568	chr1:201989382-201989531	-15.53	-0.1064	RNPEP	ENST00000295640	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_23423	chr1:26294204-26294331	-20.51	-0.1783	UBXN11	ENST00000374221,ENST00000374222	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_41841	chr10:68756272-68756483	-18.59	-0.1094	CCAR1	ENST00000265872	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_53559	chr10:101793912-101793998	-12.88	-0.1651	OGA	ENST00000361464	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_92074	chr12:50142052-50142110	-8.97	-0.1574	CERS5	ENST00000317551	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_95407	chr12:95040475-95040597	-16.21	-0.1501	NR2C1	ENST00000333003	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_110959	chr14:20372732-20372857	-16.03	-0.1358	TEP1	ENST00000262715	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_114376	chr14:74293153-74293248	-18.84	-0.2298	ABCD4	ENST00000356924	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_127618	chr15:58890280-58890461	-20.24	-0.1137	SLTM	ENST00000380516	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_133217	chr16:8635038-8635079	-9.69	-0.5383	METTL22	ENST00000381920	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_139422	chr16:89114338-89114487	-19.30	-0.1369	ACSF3	ENST00000317447,ENST00000406948	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_290158	chr17:42953723-42953778	-11.88	-0.2329	AARSD1	ENST00000427569	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_309204	chr19:49181348-49181461	-16.55	-0.1639	TRPM4	ENST00000252826	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_327748	chr2:95410863-95411026	-27.17	-0.1677	FAHD2A	ENST00000233379,ENST00000447036	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_365497	chr22:38067703-38067770	-11.96	-0.1929	PICK1	ENST00000356976,ENST00000404072	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_374497	chr3:49999439-49999513	-10.88	-0.1876	RBM6	ENST00000266022	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_374551	chr3:50100531-50100605	-14.29	-0.2916	RBM5	ENST00000347869	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_387016	chr3:121788283-121788432	-15.00	-0.1064	IQCB1	ENST00000310864	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_436035	chr5:79656957-79657001	-10.65	-0.3043	TENT2	ENST00000296783,ENST00000428308,ENST00000453514	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_438188	chr5:141638954-141639021	-12.78	-0.1936	RELL2	ENST00000297164,ENST00000444782	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_441368	chr5:32380074-32380172	-14.20	-0.1732	ZFR	ENST00000265069	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_442657	chr5:74730259-74730398	-14.48	-0.1081	GFM2	ENST00000296805,ENST00000509430	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_444499	chr5:138164086-138164133	-8.69	-0.2349	BRD8	ENST00000254900	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_511212	chrX:71555189-71555385	-19.64	-0.1067	OGT	ENST00000373719	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_374581	chr3:50110378-50110463	-18.97	-0.3328	RBM5	ENST00000347869	Frame-shift
ENSG00000232931	ENST00000448494	exon_skip_340759	chr2:85552415-85552567	-16.97	-0.1276	GGCX	ENST00000233838	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000232931	hsa-mir-22	ENST00000412393	chr2:95807365-95807454	160.00	-70.25	90	NA
ENSG00000232931	hsa-mir-22	ENST00000412393	chr2:95807237-95807327	151.00	-77.19	84	NA
ENSG00000232931	hsa-mir-22	ENST00000412393	chr2:95807517-95807612	147.00	-74.32	87	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808386-95808479	198.00	-81.71	86	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95809085-95809165	195.00	-68.52	81	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807871-95807957	189.00	-66.96	82	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807436-95807532	167.00	-74.98	95	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807573-95807659	167.00	-73.21	89	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808803-95808884	167.00	-64.56	81	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808108-95808186	157.00	-77.06	74	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808517-95808607	154.00	-77.12	87	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807231-95807324	151.00	-64.74	90	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808211-95808304	150.00	-69.92	92	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95809201-95809282	150.00	-72.01	79	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807333-95807412	149.00	-63.49	74	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808717-95808803	146.00	-73.36	81	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95808029-95808111	144.00	-72.24	59	NA
ENSG00000232931	hsa-mir-22	ENST00000448494	chr2:95807703-95807797	142.00	-72.25	81	NA

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Variants for LINC00342

RNA A-to-I editing events in lncRNA.

LncRNAediting ID	LncRNA Ensembl ID	Chromosome	Editing Position	Strand	Gene Type	Gene Name	Transcript ID	Transcript Type	Transcript Name
LncEditing_79354	ENSG00000232931.4	chr2	95808740	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79366	ENSG00000232931.4	chr2	95808803	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79433	ENSG00000232931.4	chr2	95815381	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79440	ENSG00000232931.4	chr2	95815423	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79442	ENSG00000232931.4	chr2	95815441	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79447	ENSG00000232931.4	chr2	95815497	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79462	ENSG00000232931.4	chr2	95815660	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79466	ENSG00000232931.4	chr2	95815678	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79475	ENSG00000232931.4	chr2	95815716	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79480	ENSG00000232931.4	chr2	95815758	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002
LncEditing_79481	ENSG00000232931.4	chr2	95815760	-	lincRNA	LINC00342	ENST00000448494.1	lincRNA	LINC00342-002

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID	LncRNA Index	Cancer Type	Chr_Postion_Strand	AVE1	AVE2	log2FC	W-value	P-value	Adjc.p-value	Change
ENSG00000232931	LncEditing_79447	SARC	chr2_95815497_-	5.942969e+00	2.954964e+00	9.920211e-01	6.120162e+00	9.348054e-10	1.589600e-09	UP
ENSG00000232931	LncEditing_79433	UCS	chr2_95815381_-	5.279995e+00	3.060732e+00	1.271197e+00	3.711956e+00	2.056637e-04	7.075585e-04	UP
ENSG00000232931	LncEditing_79440	UCS	chr2_95815423_-	5.458981e+00	3.652394e+00	1.724764e+00	2.054420e+00	3.993510e-02	4.114193e-02	UP
ENSG00000232931	LncEditing_79442	UCS	chr2_95815441_-	7.174285e+00	3.484227e+00	9.596961e-01	2.858948e+00	4.250491e-03	6.900147e-03	UP
ENSG00000232931	LncEditing_79447	UCS	chr2_95815497_-	6.109825e+00	3.187479e+00	1.065286e+00	3.993615e+00	6.507341e-05	3.253670e-04	UP
ENSG00000232931	LncEditing_79462	UCS	chr2_95815660_-	6.761111e+00	3.524734e+00	1.064117e+00	2.456684e+00	1.402261e-02	1.729763e-02	UP
ENSG00000232931	LncEditing_79480	UCS	chr2_95815758_-	5.986146e+00	3.553002e+00	1.328747e+00	2.198724e+00	2.789757e-02	3.072914e-02	UP
ENSG00000232931	LncEditing_79481	UCS	chr2_95815760_-	6.485574e+00	3.551747e+00	1.151138e+00	2.140619e+00	3.230477e-02	3.501240e-02	UP
ENSG00000232931	LncEditing_79433	KIRC	chr2_95815381_-	5.151581e+00	2.639561e+00	1.036573e+00	9.841203e+00	7.481087e-23	2.129674e-22	UP
ENSG00000232931	LncEditing_79433	DLBC	chr2_95815381_-	4.888022e+00	2.656301e+00	1.136580e+00	3.678851e+00	2.342870e-04	1.297150e-03	UP
ENSG00000232931	LncEditing_79440	DLBC	chr2_95815423_-	4.894235e+00	3.416550e+00	1.928480e+00	2.014327e+00	4.397520e-02	4.507013e-02	UP
ENSG00000232931	LncEditing_79447	DLBC	chr2_95815497_-	5.565732e+00	3.304104e+00	1.329235e+00	2.176873e+00	2.949005e-02	3.380930e-02	UP
ENSG00000232931	LncEditing_79433	GBM	chr2_95815381_-	6.234786e+00	3.354959e+00	1.118512e+00	6.873506e+00	6.264300e-12	3.781954e-11	UP
ENSG00000232931	LncEditing_79447	GBM	chr2_95815497_-	6.158296e+00	4.088801e+00	1.692468e+00	3.409318e+00	6.512544e-04	8.258069e-04	UP
ENSG00000232931	LncEditing_79462	GBM	chr2_95815660_-	5.493919e+00	4.063819e+00	2.298853e+00	3.210657e+00	1.324320e-03	1.608672e-03	UP
ENSG00000232931	LncEditing_79466	GBM	chr2_95815678_-	5.578328e+00	4.167281e+00	2.376842e+00	3.303216e+00	9.558270e-04	1.187810e-03	UP
ENSG00000232931	LncEditing_79433	MESO	chr2_95815381_-	3.725545e+00	2.449337e+00	1.652728e+00	4.297193e+00	1.729743e-05	5.603646e-05	UP
ENSG00000232931	LncEditing_79433	LGG	chr2_95815381_-	7.617374e+00	5.965713e+00	2.836081e+00	5.402172e+00	6.583875e-08	8.737247e-08	UP
ENSG00000232931	LncEditing_79447	LGG	chr2_95815497_-	8.108591e+00	6.103111e+00	2.439581e+00	5.289063e+00	1.229444e-07	1.595566e-07	UP
ENSG00000232931	LncEditing_79433	ACC	chr2_95815381_-	3.981456e+00	1.941038e+00	9.648153e-01	3.398573e+00	6.773841e-04	1.303837e-03	UP
ENSG00000232931	LncEditing_79354	LAML	chr2_95808740_-	2.831138e+01	1.738671e+01	1.421672e+00	4.404403e+00	1.060758e-05	2.012345e-05	UP
ENSG00000232931	LncEditing_79366	LAML	chr2_95808803_-	2.582135e+01	1.701373e+01	1.661502e+00	4.665836e+00	3.073649e-06	6.499925e-06	UP
ENSG00000232931	LncEditing_79433	LAML	chr2_95815381_-	2.025279e+01	1.705150e+01	4.028649e+00	2.333350e+00	1.962980e-02	2.091700e-02	UP
ENSG00000232931	LncEditing_79433	PCPG	chr2_95815381_-	7.874480e+00	3.771324e+00	9.415190e-01	6.413392e+00	1.423170e-10	7.950123e-10	UP
ENSG00000232931	LncEditing_79440	PCPG	chr2_95815423_-	8.422263e+00	5.793300e+00	1.852461e+00	4.279055e+00	1.876888e-05	3.200589e-05	UP
ENSG00000232931	LncEditing_79442	PCPG	chr2_95815441_-	1.004503e+01	6.064789e+00	1.373715e+00	3.982620e+00	6.815978e-05	1.044973e-04	UP
ENSG00000232931	LncEditing_79447	PCPG	chr2_95815497_-	8.272724e+00	5.125405e+00	1.447814e+00	5.777984e+00	7.560117e-09	2.681910e-08	UP
ENSG00000232931	LncEditing_79462	PCPG	chr2_95815660_-	9.638903e+00	6.061774e+00	1.494481e+00	5.510538e+00	3.577379e-08	1.065609e-07	UP
ENSG00000232931	LncEditing_79466	PCPG	chr2_95815678_-	9.297020e+00	6.160096e+00	1.684024e+00	4.415393e+00	1.008264e-05	1.788381e-05	UP
ENSG00000232931	LncEditing_79475	PCPG	chr2_95815716_-	1.087109e+01	6.116711e+00	1.205301e+00	4.650012e+00	3.319149e-06	6.530795e-06	UP
ENSG00000232931	LncEditing_79480	PCPG	chr2_95815758_-	9.310213e+00	6.353834e+00	1.814267e+00	3.471177e+00	5.181815e-04	6.680006e-04	UP
ENSG00000232931	LncEditing_79481	PCPG	chr2_95815760_-	9.663463e+00	6.617170e+00	1.830409e+00	2.946835e+00	3.210443e-03	3.814854e-03	UP
ENSG00000232931	LncEditing_79433	THCA	chr2_95815381_-	2.576506e+00	1.471562e+00	1.237520e+00	7.199193e+00	6.057016e-13	1.331236e-12	UP
ENSG00000232931	LncEditing_79433	CHOL	chr2_95815381_-	7.672345e+00	5.011993e+00	1.627914e+00	2.214815e+00	2.677277e-02	3.130736e-02	UP
ENSG00000232931	LncEditing_79433	OV	chr2_95815381_-	3.170711e+00	1.714003e+00	1.126840e+00	7.560951e+00	4.001318e-14	1.020586e-13	UP
ENSG00000232931	LncEditing_79447	OV	chr2_95815497_-	3.990961e+00	1.787224e+00	8.628009e-01	6.605629e+00	3.958341e-11	7.481387e-11	UP
ENSG00000232931	LncEditing_79433	TGCT	chr2_95815381_-	4.432855e+00	2.481265e+00	1.194514e+00	5.061612e+00	4.157269e-07	7.624767e-07	UP
ENSG00000232931	LncEditing_79433	READ	chr2_95815381_-	4.716799e+00	2.332505e+00	9.843222e-01	4.582680e+00	4.590536e-06	8.773024e-06	UP
ENSG00000232931	LncEditing_79447	LUAD	chr2_95815497_-	1.738403e+01	8.523290e+00	9.724978e-01	8.599849e+00	7.982113e-18	1.868246e-17	UP
ENSG00000232931	LncEditing_79433	PRAD	chr2_95815381_-	3.702614e+00	2.237351e+00	1.375984e+00	8.593474e+00	8.437834e-18	2.725005e-17	UP
ENSG00000232931	LncEditing_79433	BRCA	chr2_95815381_-	5.283611e+00	3.230590e+00	1.408994e+00	1.268493e+01	7.167560e-37	1.742748e-36	UP
ENSG00000232931	LncEditing_79440	BRCA	chr2_95815423_-	5.678754e+00	3.997156e+00	1.973942e+00	6.804881e+00	1.011326e-11	1.215263e-11	UP
ENSG00000232931	LncEditing_79447	BRCA	chr2_95815497_-	5.878728e+00	3.699341e+00	1.496478e+00	1.008304e+01	6.566036e-24	9.944809e-24	UP
ENSG00000232931	LncEditing_79433	PAAD	chr2_95815381_-	2.183760e+01	1.143659e+01	1.071631e+00	4.992121e+00	5.971986e-07	1.262005e-06	UP
ENSG00000232931	LncEditing_79447	ESCA	chr2_95815497_-	6.095460e+00	2.978625e+00	9.679713e-01	4.815487e+00	1.468412e-06	2.310654e-06	UP
ENSG00000232931	LncEditing_79462	ESCA	chr2_95815660_-	5.079130e+00	3.223136e+00	1.524120e+00	3.385136e+00	7.114304e-04	8.233893e-04	UP

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID	LncRNA Index	Correlation	P-value	Adjc.p-value
ENSG00000232931	LncEditing_79433	-7.177936e-01	5.393681e-04	2.750777e-02
ENSG00000232931	LncEditing_79442	-9.719673e-01	5.610429e-03	4.053935e-02
ENSG00000232931	LncEditing_79447	-4.527946e-01	3.798717e-03	5.724455e-03
ENSG00000232931	LncEditing_79433	-3.964257e-01	4.371316e-03	5.051298e-03
ENSG00000232931	LncEditing_79433	-3.847649e-01	4.750855e-02	4.800864e-02
ENSG00000232931	LncEditing_79433	-3.371691e-01	2.897621e-03	3.549585e-03
ENSG00000232931	LncEditing_79442	-3.382073e-01	2.653820e-02	3.083177e-02
ENSG00000232931	LncEditing_79462	-5.674871e-01	2.597435e-05	3.636409e-04
ENSG00000232931	LncEditing_79480	-4.153214e-01	7.698783e-03	1.397187e-02
ENSG00000232931	LncEditing_79433	-4.237671e-01	4.843001e-04	1.825439e-03
ENSG00000232931	LncEditing_79447	-4.215210e-01	9.367491e-03	1.330455e-02
ENSG00000232931	LncEditing_79433	-3.112100e-01	2.992230e-03	4.632706e-03
ENSG00000232931	LncEditing_79433	-4.759425e-01	1.826114e-04	3.054019e-03
ENSG00000232931	LncEditing_79447	-5.595190e-01	2.409889e-03	9.425775e-03
ENSG00000232931	LncEditing_79462	-6.286573e-01	1.001278e-03	6.306754e-03
ENSG00000232931	LncEditing_79433	-3.473379e-01	6.931835e-04	3.265404e-03
ENSG00000232931	LncEditing_79433	-3.865771e-01	3.449472e-07	2.023147e-06
ENSG00000232931	LncEditing_79433	-3.430861e-01	1.991632e-04	3.747413e-04
ENSG00000232931	LncEditing_79366	4.230359e-01	3.512018e-02	4.119341e-02
ENSG00000232931	LncEditing_79433	-4.870701e-01	2.917683e-05	8.541607e-04
ENSG00000232931	LncEditing_79433	-3.350510e-01	1.419124e-02	1.807925e-02
ENSG00000232931	LncEditing_79433	-3.898471e-01	1.335675e-04	1.153096e-03
ENSG00000232931	LncEditing_79447	-5.057155e-01	3.704767e-03	7.306625e-03

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID	RBP ID	RBP Gene Name	Exon Skipping ID	Skipped Exon	EX Gene Name	EX Affected TransID	ORF_anno	Cancer Type
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_114365	ENSG00000119688:chr14:74290026-74290118	ABCD4	ENST00000356924	Frame-shift	UVM,SKCM,OV,PCPG,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_370518	ENSG00000100429:chr22:50247691-50247776	HDAC10	ENST00000216271	Frame-shift	SARC,UVM,SKCM,READ,PRAD,THYM,THCA
ENSG00000232931	ENSG00000162231	NXF1	exon_skip_370518	ENSG00000100429:chr22:50247691-50247776	HDAC10	ENST00000216271	Frame-shift	SARC,UVM,PRAD,THYM,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_377198	ENSG00000065485:chr3:123130479-123130616	PDIA5	ENST00000316218	Frame-shift	UVM,SKCM,READ,OV,PCPG
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	SARC,UVM,SKCM,READ,OV,MESO,PRAD,UCS,THYM,PCPG,UCEC,TGCT,THCA
ENSG00000232931	ENSG00000130254	SAFB2	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	SARC,READ,OV,PCPG,THCA
ENSG00000232931	ENSG00000162231	NXF1	exon_skip_382458	ENSG00000060971:chr3:38131595-38131638	ACAA1	ENST00000333167	Frame-shift	SARC,UVM,SKCM,OV,PRAD,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_470226	ENSG00000105819:chr7:103307595-103307708	PMPCB	ENST00000249269	Frame-shift	UVM,SKCM,LIHC,PRAD,UCS,THYM,PCPG,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_41813	ENSG00000096746:chr10:68337857-68337996	HNRNPH3	ENST00000265866	Frame-shift	UVM,SKCM,THYM,PCPG,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_53559	ENSG00000198408:chr10:101793912-101793998	OGA	ENST00000361464	Frame-shift	UVM,SKCM,THYM,PCPG,TGCT,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_95407	ENSG00000120798:chr12:95040475-95040597	NR2C1	ENST00000333003	Frame-shift	UVM,SKCM,THYM,PCPG,THCA
ENSG00000232931	ENSG00000004534	RBM6	exon_skip_442657	ENSG00000164347:chr5:74730259-74730398	GFM2	ENST00000296805,ENST00000509430	Frame-shift	UVM,SKCM,THYM,PCPG,THCA

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000232931	LINC00342,hsa-mir-22,ANKRD49	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,WDR33	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PPWD1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DPH7	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RSRC2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZHX2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MUS81	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,AGAP6	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,C1orf35	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ICE2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PHF2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DDX42	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KAT7	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,COIL	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TRMT10B	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM6	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,USP21	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,YTHDC1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CBX1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PRR14	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SFPQ	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SF3B4	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,C2orf68	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KRI1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NRF1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PM20D2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RPRD2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,INO80D	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,KANSL1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TSNARE1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZNF7	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CCDC142	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,BRD2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZC3H4	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EHMT1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TUBGCP6	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NAA16	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,INO80	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FAM117B	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FAM193A	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SENP7	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,C17orf80	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KLHL23	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,UNK	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PARP2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TCERG1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TAB1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NCOA5	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RSBN1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KAT2A	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NCAPH2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,USPL1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TSEN2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ERCC3	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CHD2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KMT2E	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SRSF6	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM4B	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NKTR	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CCAR1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,COA5	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,EPC1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RAD52	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RPS6KB1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZCCHC8	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DDX31	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ASXL1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SMARCC2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PCF11	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,VEZF1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EIF2D	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NPAT	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GTF2F1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NAB1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PAXBP1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM39	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SINHCAF	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ARID2	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MBD1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TNRC18	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,LUC7L3	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PAGR1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SAFB2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ING5	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SLTM	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,LIG3	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CLK2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CACTIN	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,IRF2BP2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,LRCH3	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PCID2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MRPL10	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GTF3C3	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,LUC7L2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SENP6	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GOLGA8B	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KHDC4	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PHF10	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CEP95	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MBTD1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EIF4ENIF1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TIA1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DPF2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RSBN1L	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MSL1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RC3H1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ORC2	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBBP6	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EDRF1	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,SLC25A36	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,MED26	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CTPS2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TAF7	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SUDS3	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FLVCR1	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EPC2	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZFP41	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NFATC2IP	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZSWIM1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,POLG2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HOOK2	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MLLT6	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NXF1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NVL	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NUP214	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SUPT16H	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,AKAP8	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MRPL38	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBMX	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PMS1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,UBE2G2	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,CCDC120	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FBXO46	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PHF12	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SET	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CELF1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MSL2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DCAF16	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM45	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM5	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,WDR5	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TTF1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CXXC1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,COPS7B	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RCOR3	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MKRN1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZMYM5	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ANGEL2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GPATCH8	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM4	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CPSF7	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SUMO2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HNRNPUL2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MRE11	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RABGAP1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TLK2	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SNRNP200	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,C14orf93	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KMT2A	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,UBAP2	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CLASP1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM14	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PHF1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MDM4	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HINFP	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,UIMC1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MKS1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SRRM1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PCIF1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,INTS2	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SF3B1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FNBP4	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CEP44	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SRSF1	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DGCR8	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SP1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,POGZ	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NELFA	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,BRD8	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MAML1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,TBP	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EDC4	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RYK	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CIZ1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KDM3B	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CTDSPL2	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,BUD13	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DDX6	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,BRD9	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,OGT	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SCAF4	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,LYSMD1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HAUS3	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZNF83	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GOSR1	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GTPBP3	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RCCD1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,AGO2	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NEK9	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CDAN1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,BRD3	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PARP6	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,WHAMM	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CASC3	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,GGNBP2	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZMYM3	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MEN1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,N4BP2L2	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,CHERP	CHOL,LGG,DLBC,SARC,KIRP
ENSG00000232931	LINC00342,hsa-mir-22,LRRC14	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RSL24D1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,METAP1D	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,MTA1	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PRPF39	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,WBP1	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SREK1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FAM98B	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DMTF1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ANP32E	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EZH1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,NFRKB	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HEXIM1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ZBTB5	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,RBM33	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CLK3	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,ILF3	CHOL,LGG,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SMAD4	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,DEDD	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,SZT2	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,INO80E	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,OSGEPL1	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,QRICH1	CHOL,LGG,DLBC,SARC,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EDC3	CHOL,LGG,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,CEP164	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,FBXL12	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,HEATR6	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,EP400	CHOL,LGG,DLBC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,PAXIP1	CHOL,DLBC,SARC,KIRP,LIHC
ENSG00000232931	LINC00342,hsa-mir-22,KATNBL1	CHOL,LGG,DLBC,SARC,KIRP,LIHC

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000232931.4	ENST00000412393.4	145	470	33
ENSG00000232931.4	ENST00000448494.1	58	293	469

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential