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lncRNA: ENSG00000232442

Summary for MHENCR

Gene summary

Gene information	Ensembl ID	ENSG00000232442
	Gene symbol	MHENCR
	Gene name	melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489
	HGNC	53110
	Entrez ID	100505771
	Gene type	antisense
	Synonyms	CTD-3184A7.4\|20q13.33\|MHENCR
	UniProtAcc

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Structure and expression level for MHENCR

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000232442	3.743380e+02	1.153766e+00	1.949758e-01	5.917483e+00	3.270000e-09	2.110000e-08	UP	KIRP
ENSG00000232442	4.270031e+02	1.281719e+00	1.326971e-01	9.658987e+00	4.500000e-22	1.510000e-20	UP	PRAD
ENSG00000232442	1.767080e+02	1.012140e+00	1.407055e-01	7.193321e+00	6.320000e-13	3.770000e-12	UP	LUAD
ENSG00000232442	2.058878e+02	1.787058e+00	1.524008e-01	1.172604e+01	9.370000e-32	2.770000e-30	UP	COAD
ENSG00000232442	2.769768e+02	2.234789e+00	3.164845e-01	7.061292e+00	1.650000e-12	7.710000e-11	UP	READ

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000232442	3.872038e-01	8.595644e-03	CHOL	1.026838e-02
ENSG00000232442	-3.913719e-01	1.491682e-04	KICH	2.433797e-04
ENSG00000232442	3.250991e-01	2.673916e-11	LIHC	1.177796e-10
ENSG00000232442	3.616821e-01	1.798854e-18	PRAD	3.099078e-17

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lncRNA-Protein interaction for MHENCR

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000232442	ENST00000411579	CTD-3184A7.4	ENSG00000130254	SAFB2	45.63	90.7627	Q14151	TF,RBP	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000232442	ENST00000411579	CTD-3184A7.4	ENSG00000130254	SAFB2	45.63	90.1728	Q14151	TF,RBP	NA

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lncRNA-DNA interaction for MHENCR

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

ARHGEF1,MAD2L2,VAMP1,NDUFS3,MCRS1,ABHD17A,NAPRT,CIRBP,RNF166,MZF1,C1orf56,SHARPIN,RGS10,MAPK8IP3,KLF2,SRP19,TMUB1,HAGHL,XKR8,MRPS12,NDUFB9,RCE1,METTL5,SNRPA,PPP1R37,DTYMK,MSANTD2,CHKA,COMMD7,TERF2IP,RECQL4,COA4,TTC14,SRSF4,NDUFB2,ECHDC2,COX19,GDPD5,VKORC1,MPLKIP,SSU72,ACAD10,OFD1,MRPS11,RPS28,FCHSD1,MON1A,TMEM243,CC2D1B,CRELD2,CDKN2AIPNL,CFAP298,MIS12,ANO8,RBM42,CSNK2B,APBA3,GCDH,MEA1,RPL35,ANAPC5,MIIP,LPAR2,RPP38,C18orf21,C22orf39,COQ6,C12orf73,DONSON,FUZ,TSC22D4,CDK11A,SYMPK,MRPS2,NAGPA,VARS2,DCUN1D2,MRPL41,FBXW9,GIGYF1,CCDC167,HMGN3,NDUFB1,NOL3,SEC31B,RABL6,MPG,PDRG1,ARHGAP33,STAP2,ELOF1,HEXD,IDH3B,PTRHD1,CDK5,MCRIP1,CDCA3,ABHD8,MRPL52,TEDC2,NCF4,PES1,OVGP1,RBBP8NL,NMRAL1,COX6B1,PHKA2,C1orf159,NDUFS8,DDX56,FAM98C,UBE2G2,TMEM14B,RTKN,IP6K2,SWI5,TPD52L2,MALSU1,YIF1A,MLLT6,RPL23,INO80C,GUK1,BIVM,C20orf96,PHF7,HSCB,RASAL3,ARFGAP1,UCHL3,BICDL2,CD19,AP1G2,RPL13A,LSM3,NUBP2,PTGES2,ARHGAP27,SRP14,NBEAL2,CCDC78,CD48,NPDC1,PKD1,POLR3K,PIDD1,JTB,AP5Z1,GGCT,LAS1L,P4HTM,PCED1A,MAPK15,MVB12A,PFN1,RAB17,POLRMT,MPND,ANKRD49,PAXBP1,LEMD2,PTTG1,SLC35C2,REXO4,TBCD,NXT1,TRPT1,ROGDI,TMEM199,PCSK4,DMAC1,NDUFA12,DDX11,SPC24,NDUFAF7,ZNRF1,HMBS,PARVG,ZNF862,NPM3,IDUA,PRMT1,CD3D,NLRP1,SULT1A1,CETP,GGT7,SCAND1,COX14,HAGH,PPCDC,KHDC4,MIER2,RALY,FHOD1,PTPN7,ATP5IF1,DUT,NDUFS6,PYM1,AP2S1,NUDC,RASSF1,MYPOP,NFKBIB,ATXN7L2,STARD3,MSTO1,TJAP1,TAF1D,MKS1,FOXRED1,CD79A,PCBD1,EML3,DMPK,GFER,GABBR1,TIMM9,TFAP4,MIEN1,MED25,UQCRH,TP53I13,ARMC5,PMF1-BGLAP,SNU13,SLC17A9,SNRPD3,UQCRC1,RPL36AL,CYBC1,COPE,MRPL11,SLC2A8,BAD,PTS,CCDC22,ARMH1,TMEM258,GEMIN6,PHF1,ABHD11,HDAC10,RNF208,HSF4,ATRAID,NOXA1,MRPL17,UCK1,MARCKSL1,RAD51C,LAMTOR1,MICALL2,HSPBAP1,SAC3D1,MFNG,POLR1C,MZT2A,PSMG4,ZGPAT,PBX4,TIA1,SFXN4,MAGIX,IFI27L1,BRAT1,GPAA1,PSMG3,UQCR10,SAYSD1,WDR46,VOPP1,MYG1,DTX3,ZMYND19,GRIPAP1,E2F1,MTG2,RNF215,TLE5,MAPK11,NAT9,UBA7,ABHD14A,LUC7L,LSM2,TWF2,LRSAM1,ATP5PF,MRPL43,TOMM7,CRTC2,AMY2B,CYTH2,C8orf76,NOP53,NDUFB10,WRAP73,DDRGK1,PRDX5,TNFRSF18,SH3BGRL3,C15orf61,SLC25A27,TXN2,HDDC3,GPANK1,SERGEF,FHIT,NDUFAB1,HRAS,PEX6,HSBP1,CHCHD7,KCTD6,MPDU1,TBC1D10C,SAMD10,GFUS,CD52,MUTYH,SRM,RPL27,COMMD5,CINP,PMF1,ZC3HC1,LRRC75B,SENP3,CFAP410,ZC3H3,TSC2,TAF1C,LCAT,SURF6,RNASEH2B,UBL5,RPS8,RPS11,SKAP1,MPV17,HSF1,CHFR,MTRF1,DGAT1,ARVCF,PRAF2,NKG7,TEDC1,FAM216A,EPOP,ANO9,STOML1,WASHC1,KLC1,PTMS,GPS2,PEMT,NOL12,LYRM1,MBD6,SPATA2L,COMMD6,SPATA33,ACP6,EMC9,MACROD1,DUSP28,FTSJ1,BOLA1,AXIN1,CIAO3,VPS16,PLEKHO1,TTLL3,RXRB,RHBDD3,HOMER3,P3H1,TFB1M,PMPCA,SPSB2,LRP5L,TFPT,SH3GLB2,TPM2,MRPL38,SIRT7,TMEM178A,B3GNTL1,ARL16,UXT,SLIRP,TNFRSF4,TUBGCP2,NUP43,POLD2,PET100,SART1,CMC2,PEBP1,DYNC2I2,BCS1L,DMTF1,MKNK1,HINT2,CD69,LMBR1L,B3GAT3,NDUFA11,ENY2,VMP1,CENATAC,SMUG1,WDR54,SAFB2,APTX,SURF2,ZBED5,PGF,INPP5K,CDK2AP2,SLC2A11,MICOS13,SUGP1,SPG7,NAA80,SIGIRR,UQCR11,USE1,TMEM208,ERAL1,POLD1,CLK2,LYRM4,POLG2,MST1,PSENEN,CPSF7,JAK3,CTC1,MAD1L1,GABPB1,NASP,ANKRD39,MPST,RPAIN,GPR137,ACYP1,MRPS34,MRPL14,CTU2,RBM38,ELMO3,GAR1,DDX49,PFDN6,HSH2D,C3orf62,YJU2,C17orf97,ALKBH2,TMEM160,PARL,AGER,ESS2,TOP1MT,DYNLT1,C1orf52,PAFAH1B3,NXF1,TSSK6,C2orf76,PFDN5,DUS3L,TK1,CENPH,ARFGAP2,KLHL17,DNASE1,SDHAF2,TUFM,PMVK,CCDC24,ORC6,UQCRHL,KIF12,COX7A2,PCYT2,IQCC,FAAP100,MMAB,SLC27A5,MED16,MRPL55,EMG1,SH2B1,RANBP3,SNRNP25,DGKA,NDUFB11,UCP2,C19orf53,GPSM3,EIF2B4,DDX55,RANBP1,GLMN,WDR59,SURF1,DNAJC8,LCMT1,ACBD6,TNK2,FIS1,CTDNEP1,TMEM138,ALKBH6,LTO1,TRAF1,METTL1,CCDC106,MED27,NELFE,METTL23,EXD3,NFKBID,GSDMD,MAF1,STX8,RCN3,EVA1B,SLX4,ELP5,EHMT2,CHMP2A,DYNLT2,ACIN1,CD79B,ZNF48,CCHCR1,PRMT7,INPP5E,ARHGDIB,PHF11,POLR2L,QARS1,EIF3B,EBP,VPS4A,ODF3B,RNF220,HEMK1,UPF3B,IFT20,HAUS1,FRS3,FBXL8,GNRH1,KRTCAP2,POP5,CDIPT,PPM1G,GDI1,UBXN6,UCKL1,PTCD1,PDCD2L,EP400P1,USF2,COPRS,TRIOBP,SRA1,ASCC2,CPTP,LRRC14,BLOC1S1,C11orf1,STMN1,PSRC1,ZBTB8OS,CCDC107,MRPL34,BICRA,ARF5,CHTF18,JPT1,NDUFV1,TFEB,NAT14,FMNL1,CCDC174,ACAP1,HES6,CDK5RAP1,MARCHF9,NPRL2,RDH13,CCDC85B,RAMP3,SMIM22,WDR24,FBXO46,HDAC11,RGS11,ZDHHC8,SLC66A1,BCAT2,SGSM3,WDR45,DHRS12,STX10,SEPTIN1,ZBTB3,RBM25,VAMP5,ENDOV,BLCAP,FAM207A,ELP6,ERMARD,EGFL7,SNX21,CHADL,ARGLU1,YJEFN3,DUSP15,SGSM2,TMEM201,VMAC,TAF10,KRI1,RNF25,DBNL,BCL2L12,PKMYT1,DYRK4,LBHD1,CENPS,DVL1,TRIM46,PELP1,MYL6B,IPO4,TNIP2,ADAMTS13,CWF19L1,TRMT61A,COA5,COQ9,ATP5F1D,GPR132,BRD9,FKBP2,MOK,SRRT,SDSL,GEMIN8,BOLA3,TAF6L,TRIM66,SLC29A2,MRPS26,UBE2I,TMEM161A,COQ8B,RRNAD1,VAC14,ZSWIM7,RP11-523H20.5,RPS26,KIAA0895L,NDUFAF6,ATAD3B,HAUS8,ZNHIT2,BANF1,PHYKPL,PDLIM2,GSTZ1,RECQL5,BIRC5,PHKG2,NARF,TIMM10,BUD31,ASB6,POLR2J,TBC1D17,PTPMT1,ARHGAP9,POLR2I,CENPT,G6PC3,MRTO4,NUDT2,LSM4,RBM4B,SNRPB,MRPS31,C21orf58,ADAT2,TMEM143,ATP5MJ,AAAS,ARSA,ATP6V1F,CAPN15,CXXC1,HMGB2,C8orf82,PSMA4,TMEM129,HAUS5,HDAC7,TBC1D7,FBXL12,SDR39U1,CDAN1,TRAIP,EFHD2,PDAP1,CHCHD10,E2F4,NDUFC1,MTFR1L,SPIN2B,ARMC7,STAC3,GOLGA8B,GSS,SMG9,TIMM29,GOLGA8A,PAM16,TCIRG1,SETD4,PSMC5,SMIM4,GHDC,ZNF84,GALK1,C19orf18,PDCD6,MAPK3,ASCL2,USP20,LZTR1,MRPL54,GSDMB,TCEA2,ISG20,PRPSAP2,DUSP2,KRT10,ANTKMT,TMEM234,MCM7,PSMB7,SIRT3,CTU1,XAB2,CENPB,PNKD,NPEPL1,TMEM203,TMC8,TUBGCP6,FAAP20,COA3,EIF2B5,NDUFA3,RABGGTB,RAB34,TAZ,C19orf44,RNF167,PSMD13,PITHD1,OGT,RCCD1,RAB4B,TARBP2,CISD3,DHX34,RING1,RBM15,CHKB,CEP89,TRIM11,ABHD14B,OSGEP,CLK1,MRRF,TMEM79,DHPS,WASHC3,BABAM1,CARS2,ENO3,PIH1D1,MFSD3,NDUFA2,BORCS6,ORMDL1,FDX2,MCAT,CYBA,DDX51,PSMB3,PASK,GCAT,ZNF593,UBE2C,ATG4B,KIF9,FAM229A,CCS,COX6C,YIF1B,CDKN2D,CCDC159,UNC13D,NOP2,ABCA7,TMCO6,NR1H3,STK25,ACOT8,COA6,EEFSEC,ANAPC11,SCNN1D,TOR2A,RRP7A,CCDC12,ERCC5,CYB561D2,DNAJC4,CCDC28B,PPP1R12C,ATP2A3,PRR3,NICN1,PPOX,BOP1,PIF1,PPWD1,MRPL20,TRIM65,TIMM44,ADPRM,CAPN10,METRN,FAM136A,LPXN,TMEM175,C16orf74,REXO1,BCAP31,IZUMO4,BRI3,IMP4,MRPL24,GDPD3,MRM1,PSMC3,MEPCE,CWC15,CPSF4,NAA10,FBXO44,TMEM120A,TUSC2,PDCD1,PGP,LMF1,MRPS15,PRR7,ENOSF1,THOC6,UBOX5,TNFRSF13C,MOGS,GALT,FNBP4,DENND6B,ZFYVE19,IFI27L2,PTRH2,IL11RA,SGF29,NEK8,MBD3,SERF2,RPS10,CLEC2D,MRPL36,ATP13A1,KIFC2,TSNARE1,NIT1,MRPS9,RABEP2,ALKBH4,NDUFAF5,AP4M1,FRG1,LRWD1,SYF2,RAC2,NTHL1,SOD1,STK32C,WDR27,NDUFA6,HSPBP1,EME2,MTA1,NDUFAF2,B9D1,DTNBP1,ISOC2,S100A13,DCAF15,PLXNB1,NCAPH2,ATPAF2,PNISR,SFPQ,AMT,ACAP3,SPAG7,NOSIP,ZNF10,IDH3G,TAF11,MORN2,RNF149,NUDT1,CEP164,TRMU,TACC3,PSMA2,SEM1,ZNF598,TIGD5,CEP250,DNPH1,C1orf35,LSM10,TMEM150A,ZCWPW1,MRPL2,KLHDC4,CCNL2,AFMID,ANKRD10,TENT4A,HHLA3,VAX2,LSM5,SLC52A2,DDTL,H2AJ,SEC61B,KYAT1,COPS9,OSBPL7,ZMAT5,FIBP,KAT2A,PLA2G6,TMEM86B,RNPS1,SLC27A3,P2RY8,FLAD1,DPY30,FAM50A,ITPA,MAP2K2,SF3B6,RAMP2,POLI,AURKB,PAQR6,IRF7,PRPF39,ALKBH7,MRPL22,JMJD8,HAUS7,KLC4,SCRN2,GMFG,ANKS3,DDA1,SMDT1,TXNRD2,TCL1A,CRYGS,HLA-DOB,OGG1,PMS1,RPS6,ZNF83,HCN3,RGS14,NSUN6,FAM234A,ABHD10,ERCC1,PSMB1,PLCB2,RASSF4,PROCA1,IGFLR1,NUDCD2,NKIRAS2,MAP2K7,PPAN,C14orf93,DPH7,NSMCE4A,CKLF,UBE2M,POLR3F,PNPLA7,HINFP,XPA,APBB3,ANAPC16,TRIT1,SSR2,AGAP6,NUDT16L1,RBM39,NDUFA13,SNRPD2,EIF6,TRIM39,EIF3F,NEK3,ERH,CSAD,BCL7C,TMEM259,ARPC5L,CACTIN,FRA10AC1,RABGGTA,PDZD11,PEDS1,PYCR2,NUP42,IFT27,PAN3,ZNHIT1,SARS2,ARHGAP4,SWSAP1,NT5C3B,CLN3,GRK6,PA2G4,MTG1,DTNB,GTPBP3,LMF2,NUDT14,APOM,C20orf27,BIN1,ARHGAP45,SS18L1,ING4,MED15,RRP8,REC8,PGGHG,PEX16,FBXL6,WSB1,USP21,RBM10,TRIM52,COA8,PCBP4,VEGFB,MOSPD3,TTC13,ATOX1,MICAL1,COASY,EEF1D,RPS24,NDUFB6,CNFN,SLC39A4,TPRKB,NEDD8,TMEM80,GMEB2,TSR3,YPEL3,SAP30BP,RNASEH2C,DOT1L,NSMCE1,SLC25A45,PIN1,CARD16,REX1BD,DENND4B,HSD11B1L,FASTK,FXYD5,ECH1,DXO,CCDC57,RABL2B,FAM174C,POLR1D,FKBP8,TSPYL2,EPOR,STRN4,ARFIP2,C12orf57,ROM1,DPM2,RAB11B,QPCTL,N4BP2L2,L3HYPDH,DPP7,MRPL46,GPCPD1,TRAPPC12,ULK3,STK16,KCTD13,CCNQ,CLK4,C6orf136,UBE2T,TPRN,CD37,PPIH,SLC66A2,SPRN,GINS2,FAM104B,GTF2H5,SNX11,RGS19,BNIP1,UQCC2,ILKAP,METTL17,UROD,TMEM39B,SNHG32,BBC3,DHX58,CBY1,MAP4K1,SLC12A9,WDR83,USF1,RABL2A,TOMM40,SLC25A29,DERL2,B3GALT6,CAMKMT,ATP5MK,NPIPA5,CYSRT1,NOC4L,USP35,C19orf54,CLPP,DHODH,PIGZ,SPOUT1,SRSF2,CUL9,MTLN,FBXW4,TSEN54,MRPL57,FADS3,LMNTD2,ADHFE1,DAGLB,BORCS8,NUPR1,PARP10,CD72,EBPL,FAM193B,SLC25A39,PNKP,SLC25A28,CZIB,VCPKMT,SPATC1L,MRPS25,DHX16,EIF3K,POLM,CLTB,DDT,SDF2L1,POC1A,SLC9A3R2,RNFT2,TRIR,HCST,JMJD4,RTRAF,MCOLN1,SP140,GLI4,B4GALT2,NDUFB8,SSR4,TECR,COX5A,NPRL3,SLC37A4,ATP6V0B,FNDC10,MIX23,PFDN2,FAM111A,ACYP2,RPL37A,C8orf58,GNPTG,NUTF2,C11orf68,GPN2,INTS11,EZH2,RASGRP2,DUS2,NECAB3,BAP1,NAA38,ABHD12,TCTA,CCDC137,EMD,PPP2R5B,ABTB1,C11orf98,TBCB,SYCE1L,BRMS1,ZC3H8,CLEC11A,LENG1,TMEM186,PEX11G,LRRC56,TRADD,PTPN6,ZSWIM1,COMMD1,FIZ1,TATDN2,TM7SF2,LTB4R,NUDT22,CD2BP2,OGFR,PTOV1,PUSL1,C2orf68,RBM6,TRMT13,TMEM134,ORAI3,UBAC1,TNFRSF14,PSME3IP1,PPP1R14B,TCF25,UBXN11,DDX41,CROCC,CERS5,RSAD1,RP9,JOSD2,CASTOR1,MVD,RFC2,FAM3A,SRSF7,PSME2,TBRG4,ATAT1,IFFO1,ATP5F1E,PEF1,NAGK,CTBP1,POMT1,YTHDF1,CDPF1,FANCG,POMGNT1,UBE2J2,TAF4,MTIF3,C7orf26,NDUFA7,LYPLA2,MTX1,SLX4IP,CLK3,UQCRB,ABCB8,MSL3,TYK2,MC1R,INTS1,COQ4,ECI1,ACBD4,SIPA1,TMEM223,CSTF3,COMTD1,MROH6,ENTR1,SLC25A10,PPIE,CLDN15,SETD6,CHMP1A,ZNF34,NDOR1,GEMIN7,MZT2B,LY6G5C,NDUFA10,GON7,CCNL1,PIGQ,ANKRD54,RASSF7,TMEM60,GPR35,RBM45,YAE1,MESP1,EGFL8,NR2C2AP,ALDH16A1,PEX14,RETREG3,ARFRP1,CIAO2B,ABCD4,AAMDC,MRPL27,MEN1,DGKQ,ARPC4,POLE,VPS33B,KPTN,CSKMT,RAB26,TPGS1,DSN1,MICOS10,MROH1,CBX8,TRA2A,RNF126,SMARCD3,RPS13,CEP131,SH2D3C,NEURL4,RUVBL2,CNTROB,IRF2BP1,NADSYN1,IMMP1L,HSD17B10,RPS17,RBM19,TPRA1,CFDP1,ODF2L,RPS29,SLC26A6,PCSK1N,IRF3,IMP3,CHCHD5,C7orf50,NRF1,C1orf122,GADD45GIP1,SNF8,PIGL,CDC25B,DDX39A,DCAF8,STAG3L5P-PVRIG2P-PILRB,SLC25A1,LIN37,RTN4IP1,PPP1R16A,SS18L2,MAPK12,RFXANK,SUPT7L,CYTH1,ZGLP1,EMP3,UROS,SHC2,VAMP2,ANAPC7,DBP,C1orf50,SH2B2,DNAJB2,PSMA7,ANAPC2,UFD1,MYO19,COX17,SAMD1,RABAC1,TXNDC17,GAMT,EZH1,ELMOD3,DYRK1B,GPATCH3,NDUFB7,NSUN5,CLN6,THYN1,LIAS,PGLS,TELO2,ETFB,LRFN4,LRRC29,AUP1,C12orf76,FAM228B,CBLN3,TIGD1,RPL36A,THAP3,PCP2,CLASRP,PYCR3,CWC25,HMGN1,TRAF4,TTC32,ZMAT1,UTP6,ZNF18,EIF2D,TMA7,ITGAE,CYP2R1,YBEY,POMZP3,SOX12,SPIRE2,SORBS3,POLR2E,RNPEPL1,KLHDC3,TYSND1,AARSD1,RBM5,PXMP2,NKTR,THAP8,TMEM11,PARP6,TMEM238,NDUFV3,NMRK1,DGCR6L,CHMP4B,SIRT6,TMEM54,HSPB11,USPL1,TMC6,LIG1,TRAPPC2,SNRPB2

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

C14orf93,DTNBP1,DNASE1,PDCD2L,CD19,NUDC,PMF1,PEX16,PEX11G,PSMB3,CCDC167,NUPR1,PGLS,FAM110A,PDDC1,STX16,TBC1D10C,PQBP1,HEMK1,MED16,GPATCH3,MAPK3,SH3GLB2,TNFAIP8L2,UBA7,FAM73B,PDCD6,CENPM,FKBPL,SETD6,IZUMO4,CHMP2A,COX6A1,ALKBH4,MIIP,CCDC66,VMAC,MZF1,FAM160B2,GSTK1,MYL5,FBXO46,C14orf2,CPNE1,MANBAL,METTL22,PPCDC,NT5M,CHFR,GRIPAP1,NT5C,FAM234A,RPL35,FAM111A,ARPC5L,PTCD1,TRIT1,NEK8,GADD45GIP1,CAPNS1,TYSND1,C16orf91,MCOLN1,ARGLU1,CCL21,ATP5I,COX4I2,AP4B1,FKBP8,TAZ,YDJC,OTUD5,ATAT1,G6PC3,COMTD1,DHPS,RABL6,DMPK,CLPP,EIF2D,PFDN4,CTC1,COX7C,IGFLR1,EP400NL,UBE2M,REC8,LIMD2,NOSIP,AIP,DYRK4,LBHD1,NDUFB1,SRP14,ENTPD6,PSMD4,DPEP2,EMC8,CDC34,LSM2,UBALD2,PCSK1N,PTS,ABHD12,RBM42,ACCS,RABEP2,ENGASE,C2orf68,WSB1,SCNM1,S100A13,CYTH2,GTF2H5,WDR13,SNRPA,BABAM1,AARSD1,ZMYND19,SLC25A10,NMRAL1,THOP1,ZMAT1,HAUS5,ENDOG,EID2B,GPX4,TJAP1,BAX,MRPS31,C19orf44,SLC37A4,WDR18,VPS37D,SNRPC,EVL,ITPA,CNFN,CEP89,C7orf43,TIMM17B,FBXW9,VPS33B,LAMTOR4,RNF149,OCEL1,BANF1,PTDSS2,HSCB,NEK3,RNFT2,RNF126,SURF1,UBE2T,PBX4,GGA1,NELFCD,FANCG,IDH3B,NUDT22,NR2C2AP,C19orf54,POMT1,CPSF7,INTS1,SLX4,RBM6,DUS2,UBOX5,ANKRD39,POLRMT,SULT1A1,GUK1,ABHD11,METTL12,HAUS1,DTX2,C11orf98,AURKB,OXLD1,RLTPR,HM13,PMF1-BGLAP,LPAR2,SORBS3,RBM5,NICN1,BCAT2,ADAT3,C9orf114,ING4,IL3RA,C2orf81,BBC3,COQ6,UCP2,LRWD1,ENOSF1,DNAJC4,EHMT2,VAMP1,AURKAIP1,RPSA,KIAA0907,NDUFA3,PSMA2,SETD4,YIF1B,CCDC137,KPTN,NDUFS5,TNFRSF13C,BRF1,NUPL2,GZMM,USMG5

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

Only predicted by TDF

C16orf72,NUP98,C5orf15,FRMD4B,VPRBP,SMARCA5,FOSL2,ATP11B,CTTNBP2NL,ATF1,LDOC1L,UBXN7,ATP5A1,PLAA,KAT5,CANX,WNK1,TMED5,MED21,SRP72,OGDH,LPCAT3,XPO4,REST,ARL13B,PITPNA,NCK1,DIEXF,GGCX,ARF6,ITPRIPL2,CPSF2,GNE,ACBD3,FNDC3B,ELF1,CCDC6,PATL1,HSPG2,PI4KA,HACD3,SEC24B,KDM5A,PAFAH1B1,SETD7,SMAD1,TBC1D5,CERS6,GNA11,MYOF,TAF2,KPNA6,ASCC1,RELL1,SEC31A,ZBTB4,CSNK1A1,SGTB,GAPVD1,UFSP2,SLC25A24,UBAP1,TGFBRAP1,KDM4A,CCNY,NEK4,FAM73A,SF3A1,NBAS,FBXO11,SENP2,ST5,CBL,RNF185,RAB3GAP1,RAB21,C12orf49,RAB10,GPN3,NARS,GLG1,GIT2,OSBPL11,TFCP2,FASTKD5

Exist in public source

Top

lncRNA-RNA interaction for MHENCR

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

IDH3A,NEK4,TCP1,SCAPER,PSMD2,TMED5,B4GALT5,HEATR1,ARID1A,ACSL4,RNF123,PTPRK,TBC1D5,BECN1,SMARCC2,QSER1,GNL3L,POLR1B,TPM3,VTI1B,STAU2,CHD4,EDEM1,ITPR2,EIF4G1,FRG1BP,C11orf58,SLC17A5,CREBBP,PBRM1,PBX1,PSMC1,VPS13B,SRP72,GMPS,CSNK1G1,MRPL19,SIN3A,UBXN2B,GAREM1,PRRC2C,SNX19,VPS35L,RBBP9,PDPK1,GPRC5B,WWP1,ARFIP1,PAK2,TMEM127,CDK4,EPB41L3,GOLIM4,DENND2B,SURF4,TMEM33,LRP10,KIDINS220,TMCC3,PLPBP,REPS1,TMCO3,RNF31,AP4E1,BTBD10,PCDH1,GANAB,PATJ,JKAMP,CNOT7,MFSD9,MTMR12,RAB35,KLF13,SMAD1,KIF21A,WIPF2,TM9SF1,FAM102B,NBAS,LPCAT3,PLD1,CCNDBP1,TM7SF3,ZFAND3,TMX4,FBXW8,CDK14,NDST1,YAP1,CAND1,MYLK,FOXN3,NCOA4,FBH1,HPSE,TMED1,KAT7,AZI2,GAB1,ACTR2,FBXW2,DCAF7,PLSCR4,VAMP7,RBM7,FASTKD2,SEC23B,ATP8B1,PPP2CB,MED1,TGOLN2,HBP1,PDE12,IPO9,PPFIBP1,EIF4G2,NAA50,KIF1B,CAB39,SMG8,HUWE1,PRKAR1A,MIS18BP1,ERAP1,YME1L1,ATL1,CPD,ARFGEF1,UGDH,NOTCH2,PNO1,ATF1,FNDC3B,ARCN1,FYCO1,ATP7A,HERC1,HMGCR,NOMO2,LRP6,DAP,TMEM87B,FAM168B,SINHCAF,APPL2,PNPO,ARHGEF3,SLC30A6,SH2B3,UHRF1BP1L,SNX12,HACD3,CHP1,PFKM,NAF1,USF3,SIPA1L1,IWS1,FOXJ3,LARP1,UBXN7,GBA,FASTKD5,ACTN1,RHOA,HECTD1,CANT1,OS9,PAM,BTBD9,USP22,RABL3,SFT2D2,GLB1,FAM91A1,KMT2D,CTNNB1,BCL2L13,PKD2,AP3D1,ANAPC1,RNF111,TP53BP1,CHMP1B,HSPA4,SSR3,MANBA,VCL,TTLL5,G3BP1,GIGYF2,NCBP1,TFCP2,WBP11,MORF4L1,MMADHC,STAT3,PRMT5,PINK1,CCNI,TWF1,VANGL1,IPO5,TBCCD1,CRIM1,ASXL2,ALAS1,TARS1,GOLGA7,POLR2B,BAZ2A,LMBR1,RGP1,MYOF,ACVR1,ATP5F1A,HSPG2,EIF3C,TIPARP,SLC35A5,GAPVD1,NPTN,RAP1B,WDR7,GALK2,TMEM131,ARF3,GNE,USP46,WDR1,SMG6,ADNP2,SPRING1,KIAA0232,B3GALNT2,PKP2,NUP98,KIAA0586,DDX60,ST13,ATP11A,SLC39A14,TRIP12,KIAA1671,NPC1,SARAF,TFIP11,GGCX,UBE2G1,NEO1,MYO18A,CSNK1A1,GOSR1,SETD7,ATP1A1,AKAP13,WAC,ELF1,VWA8,CLINT1,UGGT1,TAF2,CAST,TEX2,PLAA,UTP25,F2R,MED21,ATP6V1C1,AMBRA1,CANX,TMBIM6,MPRIP,DOCK1,CTDSP2,PSMD1,TCP11L1,HAUS2,CCNK,NCOR1,ZFYVE9,SDAD1,WSB2,SLC44A1,EMC1,CNOT1,DIABLO,DSTYK,MBP,SLC35E1,ATP6V1D,UBAP1,MYH9,NRP2,SERINC5,NUP155,GBE1,WWTR1,ACTR3,PCDHGC3,NOP9,CHD8,TAOK3,PIP4K2C,RAB3GAP1,TSR1,HPS3,KAT5,TOX4,METAP2,KIAA0100,ARPP19,SUCLG2,UBE4A,FAT1,GDI2,SPTLC2,SGTB,CAP1,ITPRIPL2,IPO11,PDHX,LARGE1,WASF2,MYO5B,VGLL4,MACF1,DHX8,NBR1,GFPT1,BORCS5,RIC1,SPRED2,KDM5B,RAPGEF2,ATP2C1,MFSD6,CCNY,ILK,MR1,FLT1,PTPN21,HEG1,CCPG1,FARP2,EIF4EBP2,SNRK,SEC24D,UBE2D3,SEPTIN11,TEK,KIF13A,DAZAP2,CLIP1,RFFL,SART3,ARNT,RNF19B,API5,BCKDHA,IQGAP2,ASB7,NCOA2,SNAP23,WLS,GFM1,PRKDC,AP2B1,RNF169,TRIM35,CNIH1,PRKAR2A,RAB11FIP1,RAB5C,GNS,TLR3,SSR1,USP9X,NSD1,RHBDD1,NGRN,SMAP1,CEP97,DCTN1,TGFBRAP1,DDR2,MYO1E,SSH1,RBM41,TMLHE,KLHL5,MAP4K4,TIRAP,MTF1,CCNG1,PEX19,PPARA,FICD,PIGS,HYOU1,GALC,ANTXR2,KIF2A,OGDH,RAB3D,EIF3L,SOS2,SLC30A5,THRAP3,YTHDF3,LARS2,DYNC1H1,CS,BACE1,PCYT1A,POLK,ACTN4,VCPIP1,BRF2,AFF1,CARM1,OSMR,MRTFB,FYTTD1,SNX18,B3GNT5,ERCC4,MAGT1,CKAP5,CPSF2,HDHD2,ATP2B1,GNA12,GLYR1,DHX36,PALLD,GNA11,GSK3B,TUBA1B,VPS26C,PDSS2,CDC5L,SGPP2,SYT11,RNF4,SPATA5,NT5C2,YLPM1,ATP6V1B2,SENP2,UBQLN1,HIPK1,RNF40,TACC1,CDKL5,NRBF2,SPIRE1,PI4KA,PSEN1,APLP2,SLC30A9,PTPN11,MID2,MTREX,PLEKHB2,SPAST,GORASP2,POLR2A,ANKFY1,FGD6,DNAJC11,CLTC,ATRN,AP1AR,GLG1,PARG,SDHC,ATP2A2,SMIM14,SON,LZIC,MYO1B,ANKRD50,CSDE1,GYG1,PTPRG,HSPA8,M6PR,SNX29,APAF1,ASCC1,CDYL,TPP1,ERLIN2,SMAD2,UBE2Z,VIRMA,HSPA4L,IQGAP1,RAB29,SMARCA2,SLMAP,CLCN3,GSTCD,STRAP,UFSP2,CLCC1,MPDZ,SDE2,MFSD14A,CSNK2A1,FTO,IKBKG,USP30,KDM1B,NUP205,COPB2,STIM1,SEC14L1,ADD1,NIPA2,ATP6V1A,ARSB,SCARB2,ZFYVE1,PDLIM5,KIF13B,KBTBD4,MIDEAS,ZNF106,APP,DDX50,CHTF8,STT3A,ANKRD40,PTPN9,MBTPS1,SF3A1,PHC3,SNX1,DDB1,ABHD5,TAF1B,RAB11A,FAM120B,DOCK9,SYNJ1,PIGN,SBF2,ITGA6,ATP9B,SSPN,PARD3,C16orf72,ERC1,HPS5,SNX7,SEC31A,PPP2R2A,CYFIP1,ZNF28,LSM12,ANO6,ARL2BP,RTN4,BCOR,EVC,SIK2,TMEM135,AZIN1,USP10,AFAP1,AHNAK,TMED10,UBE2W,MCFD2,TRAF7,MYO1C,SLC39A6

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

ORF mutation

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000232442	ENST00000411579	exon_skip_20543	chr1:1712263-1712400	-24.13	-0.2298	CDK11A	ENST00000378633	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_5818	chr1:45568484-45568684	-22.02	-0.1359	AKR1A1	ENST00000351829,ENST00000372070	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_110959	chr14:20372732-20372857	-15.62	-0.1313	TEP1	ENST00000262715	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_123726	chr15:75339701-75339878	-28.20	-0.1893	COMMD4	ENST00000267935	In-frame
ENSG00000232442	ENST00000411579	exon_skip_140339	chr16:635611-635774	-23.65	-0.1478	METTL26	ENST00000301686	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_309204	chr19:49181348-49181461	-18.83	-0.1883	TRPM4	ENST00000252826	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_340759	chr2:85552415-85552567	-16.27	-0.1984	GGCX	ENST00000233838	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_353131	chr20:58669290-58669453	-26.37	-0.1953	STX16	ENST00000371141	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_370518	chr22:50247691-50247776	-15.70	-0.2211	HDAC10	ENST00000216271	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_377198	chr3:123130479-123130616	-17.45	-0.1274	PDIA5	ENST00000316218	Frame-shift
ENSG00000232442	ENST00000449500	exon_skip_380242	chr3:186784961-186785101	-14.72	-0.1090	EIF4A2	ENST00000323963	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_382458	chr3:38131595-38131638	-9.61	-0.2344	ACAA1	ENST00000333167	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_436035	chr5:79656957-79657001	-7.51	-0.1788	TENT2	ENST00000296783,ENST00000428308,ENST00000453514	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_446770	chr5:178215275-178215430	-26.55	-0.2141	PHYKPL	ENST00000308158	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_494079	chr8:144099080-144099205	-20.85	-0.2085	SHARPIN	ENST00000398712	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_4796	chr1:41007448-41007545	-14.81	-0.1683	CTPS1	ENST00000372616,ENST00000372621	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_9446	chr1:147270931-147271005	-9.71	-0.1798	CHD1L	ENST00000369258	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_38175	chr1:234398381-234398553	-15.82	-0.1062	TARBP1	ENST00000040877	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_41813	chr10:68337857-68337996	-15.18	-0.1332	HNRNPH3	ENST00000265866	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_41841	chr10:68756272-68756483	-24.83	-0.1478	CCAR1	ENST00000265872	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_53559	chr10:101793912-101793998	-14.38	-0.3060	OGA	ENST00000361464	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_66482	chr11:126274926-126275021	-12.78	-0.1682	FOXRED1	ENST00000263578	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_74009	chr11:64773429-64773505	-15.55	-0.2190	SF1	ENST00000377390	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_87733	chr12:120571190-120571291	-13.12	-0.1822	RNF10	ENST00000325954	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_92074	chr12:50142052-50142110	-6.87	-0.6870	CERS5	ENST00000317551	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_95407	chr12:95040475-95040597	-14.56	-0.1193	NR2C1	ENST00000333003	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_96024	chr12:109090008-109090207	-21.14	-0.1229	ALKBH2	ENST00000343075,ENST00000429722	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_111863	chr14:23565815-23565892	-19.31	-0.3017	AP1G2	ENST00000308724,ENST00000397120	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_111870	chr14:23566561-23566686	-16.94	-0.1993	AP1G2	ENST00000397120	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_114365	chr14:74290026-74290118	-16.16	-0.1757	ABCD4	ENST00000356924	Frame-shift
ENSG00000232442	ENST00000449500	exon_skip_123601	chr15:74897010-74897219	-19.24	-0.1119	MPI	ENST00000352410	Frame-shift
ENSG00000232442	ENST00000449500	exon_skip_127618	chr15:58890280-58890461	-18.07	-0.1173	SLTM	ENST00000380516	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_138351	chr16:70469151-70469323	-25.67	-0.1646	FUK	ENST00000288078	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_285958	chr17:5404098-5404246	-14.59	-0.1035	NUP88	ENST00000573584	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_290158	chr17:42953723-42953778	-9.01	-0.1669	AARSD1	ENST00000427569	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_292904	chr17:69251746-69251866	-14.93	-0.2228	ABCA5	ENST00000392676,ENST00000588877	In-frame
ENSG00000232442	ENST00000411579	exon_skip_313557	chr19:5786748-5786845	-25.22	-0.2600	DUS3L	ENST00000309061	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_319223	chr19:43526200-43526349	-21.80	-0.1535	ETHE1	ENST00000292147	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_324294	chr2:27774423-27774530	-14.96	-0.2233	MRPL33	ENST00000296102	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_326885	chr2:74490024-74490127	-20.01	-0.2501	TTC31	ENST00000233623	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_358821	chr20:63943652-63943669	-6.19	-2.0633	UCKL1	ENST00000354216	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_370525	chr22:50250426-50250523	-16.19	-0.1974	HDAC10	ENST00000216271	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_374497	chr3:49999439-49999513	-11.55	-0.1582	RBM6	ENST00000266022	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_374551	chr3:50100531-50100605	-11.31	-0.1950	RBM5	ENST00000347869	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_384420	chr3:49812647-49812738	-16.42	-0.3421	UBA7	ENST00000333486	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_387016	chr3:121788283-121788432	-15.55	-0.1143	IQCB1	ENST00000310864	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_433210	chr4:177436275-177436351	-7.01	-0.1375	AGA	ENST00000264595	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_441368	chr5:32380074-32380172	-18.21	-0.2142	ZFR	ENST00000265069	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_442657	chr5:74730259-74730398	-14.19	-0.1526	GFM2	ENST00000296805,ENST00000509430	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_444499	chr5:138164086-138164133	-7.54	-0.1839	BRD8	ENST00000254900	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_445390	chr5:150403120-150403312	-20.89	-0.1251	CD74	ENST00000009530	In-frame
ENSG00000232442	ENST00000411579	exon_skip_446758	chr5:178212972-178213103	-17.24	-0.1895	PHYKPL	ENST00000308158	Frame-shift
ENSG00000232442	ENST00000449500	exon_skip_466113	chr7:48099669-48099787	-10.66	-0.1015	UPP1	ENST00000331803,ENST00000395564	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_466137	chr7:48103296-48103411	-15.81	-0.1520	UPP1	ENST00000331803,ENST00000395564	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_470226	chr7:103307595-103307708	-11.48	-0.1852	PMPCB	ENST00000249269	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_476549	chr7:76013741-76013887	-19.79	-0.2199	STYXL1	ENST00000248600,ENST00000359697,ENST00000431581	Frame-shift
ENSG00000232442	ENST00000449500	exon_skip_481699	chr8:19824802-19824972	-14.16	-0.1264	INTS10	ENST00000397977	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_509943	chrX:47175018-47175092	-15.62	-0.3124	RBM10	ENST00000377604	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_511212	chrX:71555189-71555385	-21.60	-0.1846	OGT	ENST00000373719	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_13857	chr1:168038370-168038488	-12.47	-0.1199	DCAF6	ENST00000312263	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_370501	chr22:50220250-50221874	-63.16	-0.1157	TUBGCP6	ENST00000248846	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_326741	chr2:73946718-73946906	-18.46	-0.1026	DGUOK	ENST00000264093	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_514339	chrX:23713134-23713208	-9.78	-0.1438	ACOT9	ENST00000336430	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_11532	chr1:155137560-155137722	-22.86	-0.2969	SLC50A1	ENST00000368404	In-frame
ENSG00000232442	ENST00000411579	exon_skip_52671	chr10:97461495-97461622	-16.63	-0.1980	MMS19	ENST00000370782,ENST00000438925	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_52701	chr10:97468965-97469104	-20.77	-0.1717	MMS19	ENST00000370782,ENST00000438925	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_374581	chr3:50110378-50110463	-12.26	-0.1830	RBM5	ENST00000347869	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_387819	chr3:127575748-127575809	-12.07	-0.2321	TPRA1	ENST00000355552,ENST00000450633,ENST00000489960	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_11029	chr1:154989559-154989707	-20.40	-0.2217	FLAD1	ENST00000292180	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_371367	chr3:9697710-9697866	-21.07	-0.1414	MTMR14	ENST00000296003	In-frame
ENSG00000232442	ENST00000411579	exon_skip_143275	chr16:24939363-24939597	-31.71	-0.2421	ARHGAP17	ENST00000289968	In-frame
ENSG00000232442	ENST00000411579	exon_skip_356337	chr20:35118597-35118719	-14.02	-0.1335	EDEM2	ENST00000374492	Frame-shift
ENSG00000232442	ENST00000411579	exon_skip_476008	chr7:65970281-65970366	-16.15	-0.2243	GUSB	ENST00000304895	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

Top

Variants for MHENCR

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

Top

lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000232442	ENSG00000002822	MAD1L1	ACC,BRCA,CHOL,HNSC,KICH,KIRP,LGG,PAAD,THYM	KIRP
ENSG00000232442	ENSG00000004777	ARHGAP33	ACC,BLCA,BRCA,CESC,CHOL,COAD,HNSC,KIRC,KIRP,LAML,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,THCA,THYM,UCEC,UCS	LUAD,READ
ENSG00000232442	ENSG00000007392	LUC7L	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000060491	OGFR	ACC,BLCA,BRCA,CHOL,COAD,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000062716	VMP1	ACC,ESCA,HNSC,KICH,KIRC,KIRP	KIRP
ENSG00000232442	ENSG00000065057	NTHL1	ACC,BLCA,CESC,COAD,DLBC,GBM,HNSC,KICH,KIRP,LAML,LGG,LIHC,LUAD,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,THCA	COAD,READ
ENSG00000232442	ENSG00000072609	CHFR	ACC,CHOL,KIRC,KIRP,LGG,PAAD,PCPG,THYM,UVM	KIRP
ENSG00000232442	ENSG00000079462	PAFAH1B3	ACC,BLCA,CESC,COAD,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PCPG,PRAD,READ,THYM	COAD,READ
ENSG00000232442	ENSG00000080189	SLC35C2	ACC,BLCA,BRCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PRAD,READ,THYM	READ
ENSG00000232442	ENSG00000090971	NAT14	ACC,BRCA,CESC,DLBC,ESCA,HNSC,KICH,KIRP,LGG,LIHC,LUAD,PAAD,PCPG,PRAD,THCA,THYM,UCEC,UCS	KIRP
ENSG00000232442	ENSG00000091651	ORC6	ACC,COAD,GBM,LUSC,UCS	COAD
ENSG00000232442	ENSG00000099901	RANBP1	ACC,COAD,HNSC,KICH,LGG,LIHC,MESO,PRAD,THYM	COAD
ENSG00000232442	ENSG00000099904	ZDHHC8	ACC,COAD,KICH,KIRC,KIRP,LAML,LGG,PAAD,READ	READ
ENSG00000232442	ENSG00000100288	CHKB	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000100416	TRMU	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SARC,STAD,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000100908	EMC9	ACC,BRCA,CESC,ESCA,HNSC,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,SARC,THCA,THYM	LUAD
ENSG00000232442	ENSG00000102898	NUTF2	ACC,BLCA,BRCA,COAD,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PCPG,PRAD,READ,TGCT,THCA,THYM,UCS,UVM	COAD,KIRP,READ
ENSG00000232442	ENSG00000103168	TAF1C	ACC,BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,THCA,UCEC,UVM	READ
ENSG00000232442	ENSG00000104524	PYCR3	ACC,BRCA,CESC,COAD,HNSC,KICH,KIRC,KIRP,LIHC,READ,THCA,UCS	COAD,READ
ENSG00000232442	ENSG00000106268	NUDT1	ACC,BRCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THYM	COAD,KIRP,READ
ENSG00000232442	ENSG00000106462	EZH2	ACC,KIRC,KIRP,THYM,UVM	KIRP
ENSG00000232442	ENSG00000108518	PFN1	ACC,BRCA,CHOL,KICH,KIRP,LAML,PRAD,THYM	KIRP
ENSG00000232442	ENSG00000108773	KAT2A	ACC,BLCA,BRCA,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,UCEC,UCS,UVM	COAD,KIRP,LUAD,READ
ENSG00000232442	ENSG00000111665	CDCA3	ACC,COAD,HNSC,LIHC,READ,THYM	COAD,READ
ENSG00000232442	ENSG00000116649	SRM	ACC,BRCA,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PRAD,READ,THYM	COAD,READ
ENSG00000232442	ENSG00000119333	DYNC2I2	ACC,BRCA,CESC,HNSC,KIRP,LGG,LIHC,READ,SARC,THCA,THYM	READ
ENSG00000232442	ENSG00000123136	DDX39A	ACC,BLCA,BRCA,CHOL,COAD,HNSC,KICH,KIRC,KIRP,LGG,PAAD,PCPG,PRAD,READ,THCA,THYM,UCEC	COAD,READ
ENSG00000232442	ENSG00000127564	PKMYT1	ACC,BRCA,COAD,LIHC,READ,THYM	COAD,READ
ENSG00000232442	ENSG00000127586	CHTF18	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,PCPG,PRAD,READ,SARC,SKCM,THCA,THYM,UCEC,UCS	COAD,KIRP,LUAD,PRAD,READ
ENSG00000232442	ENSG00000132522	GPS2	ACC,BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000132635	PCED1A	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PRAD,SKCM,STAD,THCA,THYM,UCEC,UCS	COAD
ENSG00000232442	ENSG00000132661	NXT1	ACC,CHOL,HNSC,KICH,KIRP,LAML,LGG,LIHC,PRAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000132680	KHDC4	ACC,BLCA,ESCA,GBM,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PRAD,STAD,UVM	LUAD
ENSG00000232442	ENSG00000133265	HSPBP1	ACC,BRCA,CESC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000134222	PSRC1	ACC,DLBC,HNSC,KIRC,KIRP,MESO,READ,THYM	READ
ENSG00000232442	ENSG00000135596	MICAL1	ACC,CHOL,COAD,KICH,KIRC,KIRP,LGG,PAAD,READ,THYM	KIRP
ENSG00000232442	ENSG00000136908	DPM2	ACC,BRCA,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000142102	PGGHG	ACC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,SKCM,TGCT,THYM,UCEC,UCS	KIRP
ENSG00000232442	ENSG00000142330	CAPN10	ACC,BLCA,BRCA,CHOL,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000142684	ZNF593	ACC,BRCA,CESC,COAD,ESCA,HNSC,KICH,LGG,LIHC,MESO,OV,PAAD,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC	COAD
ENSG00000232442	ENSG00000143554	SLC27A3	ACC,BLCA,DLBC,HNSC,KIRC,KIRP	KIRP
ENSG00000232442	ENSG00000143793	C1orf35	ACC,BLCA,BRCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000148399	DPH7	ACC,BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000149636	DSN1	ACC,COAD,GBM,HNSC,KICH,KIRP,READ,THYM,UVM	COAD,READ
ENSG00000232442	ENSG00000158062	UBXN11	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCS	COAD,KIRP,READ
ENSG00000232442	ENSG00000159147	DONSON	ACC,ESCA,KICH,KIRC,KIRP,LGG,UVM	KIRP
ENSG00000232442	ENSG00000160072	ATAD3B	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SKCM,THCA,THYM,UCEC,UCS,UVM	COAD,LUAD,READ
ENSG00000232442	ENSG00000161888	SPC24	ACC,BRCA,CESC,COAD,HNSC,KIRC,LIHC,MESO,PRAD,READ,THYM	COAD,PRAD,READ
ENSG00000232442	ENSG00000162062	TEDC2	ACC,BRCA,CESC,COAD,GBM,HNSC,KIRP,LGG,LIHC,MESO,PRAD,READ,THYM,UCS	COAD,KIRP,PRAD,READ
ENSG00000232442	ENSG00000162650	ATXN7L2	ACC,CHOL,COAD,KIRC,KIRP,LGG,LUAD,LUSC,PCPG,THCA,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000163463	KRTCAP2	ACC,BLCA,BRCA,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,OV,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC	LUAD
ENSG00000232442	ENSG00000165689	ENTR1	ACC,CHOL,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,PAAD,READ,THCA	COAD,READ
ENSG00000232442	ENSG00000165724	ZMYND19	ACC,BLCA,BRCA,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,READ,THCA,THYM,UCEC,UCS	COAD,READ
ENSG00000232442	ENSG00000166012	TAF1D	ACC,ESCA,KIRP,LGG,PRAD,UCS	KIRP
ENSG00000232442	ENSG00000166508	MCM7	ACC,CHOL,COAD,KIRP,LIHC,THYM	COAD,KIRP
ENSG00000232442	ENSG00000167523	SPATA33	ACC,BLCA,BRCA,CESC,COAD,ESCA,HNSC,KIRC,KIRP,LUAD,LUSC,MESO,OV,PAAD,READ,SARC,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000167702	KIFC2	ACC,BLCA,BRCA,COAD,HNSC,KIRC,KIRP,LAML,OV,PAAD,READ,SKCM,THCA,UCS	COAD,KIRP,READ
ENSG00000232442	ENSG00000167900	TK1	ACC,KICH,KIRC,LIHC,PRAD,THYM	PRAD
ENSG00000232442	ENSG00000167930	FAM234A	ACC,BLCA,BRCA,CESC,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,MESO,PCPG,PRAD,THCA,THYM,UCS	KIRP
ENSG00000232442	ENSG00000168061	SAC3D1	ACC,BLCA,BRCA,CESC,COAD,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PAAD,READ,THYM	READ
ENSG00000232442	ENSG00000168096	ANKS3	ACC,BLCA,BRCA,CESC,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000168393	DTYMK	ACC,BRCA,CESC,COAD,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PRAD,READ,THYM,UCS	COAD
ENSG00000232442	ENSG00000171097	KYAT1	ACC,CHOL,DLBC,GBM,LAML,LGG,OV,READ,THCA	READ
ENSG00000232442	ENSG00000171222	SCAND1	ACC,BLCA,BRCA,CESC,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000173272	MZT2A	ACC,BLCA,CESC,DLBC,HNSC,KICH,KIRC,LAML,LGG,LIHC,LUSC,PRAD,READ,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000173457	PPP1R14B	ACC,BLCA,BRCA,COAD,DLBC,KICH,KIRC,KIRP,LAML,LGG,LIHC,READ,THYM,UCEC	KIRP,READ
ENSG00000232442	ENSG00000175063	UBE2C	ACC,BRCA,CESC,COAD,ESCA,HNSC,KICH,KIRC,LIHC,LUSC,READ,THYM	COAD,READ
ENSG00000232442	ENSG00000175265	GOLGA8A	ACC,BLCA,BRCA,CHOL,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PRAD,SKCM,STAD,TGCT,THCA,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000176022	B3GALT6	ACC,BLCA,BRCA,CHOL,COAD,DLBC,HNSC,KICH,KIRP,LGG,LIHC,MESO,PRAD,READ,THYM	READ
ENSG00000232442	ENSG00000177595	PIDD1	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM,UCS	KIRP,READ
ENSG00000232442	ENSG00000179271	GADD45GIP1	ACC,BLCA,BRCA,CESC,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC	READ
ENSG00000232442	ENSG00000180822	PSMG4	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,PAAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS	COAD,READ
ENSG00000232442	ENSG00000182325	FBXL6	ACC,BLCA,BRCA,CESC,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,READ,TGCT,THCA,THYM,UCEC,UCS	COAD,READ
ENSG00000232442	ENSG00000184162	NR2C2AP	ACC,BLCA,BRCA,COAD,HNSC,KICH,KIRC,KIRP,LGG,LIHC,MESO,OV,PAAD,PCPG,PRAD,READ,THYM	COAD,KIRP,READ
ENSG00000232442	ENSG00000184402	SS18L1	ACC,BLCA,BRCA,COAD,ESCA,GBM,HNSC,LUAD,LUSC,OV,PAAD,PCPG,READ,SKCM,STAD,UCS,UVM	READ
ENSG00000232442	ENSG00000184465	WDR27	ACC,CHOL,ESCA,GBM,KIRC,KIRP,LGG,PAAD,READ,THCA,UCS	KIRP,READ
ENSG00000232442	ENSG00000184786	DYNLT2	ACC,BLCA,CESC,CHOL,DLBC,LGG,READ,SARC,THCA,THYM	READ
ENSG00000232442	ENSG00000184967	NOC4L	ACC,BRCA,CESC,COAD,HNSC,KIRC,LAML,LGG,LIHC,PAAD,PRAD,READ,SARC,THCA,THYM	READ
ENSG00000232442	ENSG00000185347	TEDC1	ACC,BRCA,CESC,CHOL,HNSC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,THCA,THYM,UCS	KIRP
ENSG00000232442	ENSG00000185522	LMNTD2	ACC,BLCA,BRCA,COAD,ESCA,KIRC,KIRP,OV,READ,THCA,UCEC,UCS	KIRP,READ
ENSG00000232442	ENSG00000186166	CENATAC	ACC,BLCA,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000187961	KLHL17	ACC,BLCA,BRCA,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD,SKCM,THYM,UCEC,UVM	COAD,LUAD,PRAD
ENSG00000232442	ENSG00000188807	TMEM201	ACC,COAD,KICH,PAAD,READ	READ
ENSG00000232442	ENSG00000196123	KIAA0895L	ACC,BLCA,BRCA,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,STAD,THCA,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000197774	EME2	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,THCA,UCEC,UCS,UVM	COAD,KIRP,LUAD,PRAD,READ
ENSG00000232442	ENSG00000204149	AGAP6	ACC,BLCA,BRCA,CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LGG,PAAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000204305	AGER	ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,PAAD,READ,SKCM,TGCT,THYM,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000204991	SPIRE2	ACC,BRCA,COAD,GBM,KIRP,LGG,LIHC,LUAD,PCPG,READ,UCS	LUAD
ENSG00000232442	ENSG00000213398	LCAT	ACC,ESCA,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000213903	LTB4R	ACC,CHOL,COAD,DLBC,KIRC,KIRP,LAML,LGG,LUAD,PAAD,PRAD,UCEC,UCS	COAD,KIRP
ENSG00000232442	ENSG00000213918	DNASE1	ACC,BLCA,GBM,LGG,LUSC,PCPG,PRAD,READ,SKCM,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000215440	NPEPL1	ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	COAD,READ
ENSG00000232442	ENSG00000221978	CCNL2	ACC,BLCA,BRCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,STAD,TGCT,THCA,UCEC,UCS,UVM	KIRP,LUAD,READ
ENSG00000232442	ENSG00000228594	FNDC10	ACC,BLCA,BRCA,HNSC,PRAD,READ,SARC,TGCT,THCA,UCS	PRAD,READ
ENSG00000232442	ENSG00000249115	HAUS5	ACC,BRCA,CHOL,COAD,GBM,HNSC,KIRC,LAML,LGG,LIHC,PAAD,PCPG,READ	COAD,READ
ENSG00000232442	ENSG00000277791	PSMB3	ACC,CESC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PCPG,PRAD,TGCT,THCA,THYM	KIRP
ENSG00000232442	ENSG00000005075	POLR2J	BLCA,BRCA,CESC,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000006015	REX1BD	BLCA,BRCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC	COAD,READ
ENSG00000232442	ENSG00000006025	OSBPL7	BLCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LAML,LGG,LUSC,PCPG,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000006625	GGCT	BLCA,COAD,HNSC,KICH,LIHC	COAD
ENSG00000232442	ENSG00000011478	QPCTL	BLCA,BRCA,CESC,CHOL,COAD,HNSC,KICH,KIRC,KIRP,LGG,MESO,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000064545	TMEM161A	BLCA,BRCA,CESC,COAD,HNSC,KIRC,LAML,LGG,LIHC,MESO,PRAD,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000071859	FAM50A	BLCA,BRCA,COAD,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,MESO,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000074071	MRPS34	BLCA,BRCA,CESC,COAD,DLBC,GBM,HNSC,KICH,KIRC,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,SARC,THCA,THYM	READ
ENSG00000232442	ENSG00000099889	ARVCF	BLCA,COAD,ESCA,KIRP,LGG,PAAD,PRAD,THCA	COAD
ENSG00000232442	ENSG00000100068	LRP5L	BLCA,CHOL,DLBC,KIRP,LUAD,LUSC,PAAD,PRAD,READ,TGCT,UVM	READ
ENSG00000232442	ENSG00000100429	HDAC10	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS	KIRP,READ
ENSG00000232442	ENSG00000101181	MTG2	BLCA,BRCA,CESC,COAD,GBM,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SKCM,STAD,THCA,UCEC,UVM	COAD
ENSG00000232442	ENSG00000102030	NAA10	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM,UCEC	COAD,READ
ENSG00000232442	ENSG00000102125	TAZ	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000103254	ANTKMT	BLCA,BRCA,CESC,CHOL,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,TGCT,THCA,THYM,UCEC,UCS	KIRP
ENSG00000232442	ENSG00000106009	BRAT1	BLCA,BRCA,CESC,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM,UCS	READ
ENSG00000232442	ENSG00000109065	NAT9	BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PRAD,READ,STAD,TGCT,THCA,UCEC,UCS	COAD,LUAD,READ
ENSG00000232442	ENSG00000115687	PASK	BLCA,CHOL,COAD,KIRP,LUSC,PAAD,SKCM	COAD
ENSG00000232442	ENSG00000116691	MIIP	BLCA,BRCA,CESC,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000127415	IDUA	BLCA,BRCA,COAD,DLBC,GBM,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,THCA,THYM	KIRP
ENSG00000232442	ENSG00000127922	SEM1	BLCA,BRCA,COAD,DLBC,ESCA,HNSC,KIRC,KIRP,LGG,LIHC,READ,TGCT,THCA,THYM,UCEC,UVM	KIRP
ENSG00000232442	ENSG00000130299	GTPBP3	BLCA,BRCA,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,PAAD,PRAD,READ,THCA	READ
ENSG00000232442	ENSG00000130305	NSUN5	BLCA,BRCA,CESC,CHOL,COAD,HNSC,KIRC,KIRP,LIHC,PAAD,READ,THYM	KIRP,READ
ENSG00000232442	ENSG00000130313	PGLS	BLCA,BRCA,COAD,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM	KIRP
ENSG00000232442	ENSG00000130590	SAMD10	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,OV,PCPG,PRAD,READ,SKCM,STAD,UCEC,UCS	COAD,LUAD,READ
ENSG00000232442	ENSG00000130701	RBBP8NL	BLCA,BRCA,CESC,COAD,PRAD,READ,THCA,UCEC	COAD,READ
ENSG00000232442	ENSG00000130748	TMEM160	BLCA,BRCA,CESC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM	READ
ENSG00000232442	ENSG00000132879	FBXO44	BLCA,BRCA,CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LAML,LUAD,LUSC,OV,PAAD,PCPG,PRAD,READ,SARC,STAD,TGCT,THCA,UCEC,UCS	READ
ENSG00000232442	ENSG00000133315	MACROD1	BLCA,BRCA,CESC,COAD,GBM,HNSC,LAML,LGG,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000134905	CARS2	BLCA,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,PAAD,PCPG,PRAD,READ,TGCT,THYM	READ
ENSG00000232442	ENSG00000135722	FBXL8	BLCA,BRCA,CESC,COAD,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LUAD,LUSC,MESO,OV,PCPG,PRAD,READ,SKCM,THCA,THYM,UCEC,UVM	KIRP,PRAD,READ
ENSG00000232442	ENSG00000136270	TBRG4	BLCA,BRCA,COAD,DLBC,KIRC,KIRP,LAML,LIHC,READ,THYM	READ
ENSG00000232442	ENSG00000138834	MAPK8IP3	BLCA,CHOL,COAD,KICH,KIRC,KIRP,LAML,LUAD,LUSC,PAAD,PRAD,READ,SKCM,THCA,UCEC,UCS,UVM	KIRP,LUAD,READ
ENSG00000232442	ENSG00000143630	HCN3	BLCA,COAD,HNSC,KIRC,KIRP,LUAD,LUSC,READ	LUAD,READ
ENSG00000232442	ENSG00000146067	FAM193B	BLCA,BRCA,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,PAAD,READ,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000146828	SLC12A9	BLCA,BRCA,COAD,DLBC,KICH,KIRC,KIRP,LGG,READ	READ
ENSG00000232442	ENSG00000146830	GIGYF1	BLCA,CHOL,COAD,GBM,KIRC,KIRP,LAML,LGG,PAAD,READ,SKCM,UCEC,UCS,UVM	READ
ENSG00000232442	ENSG00000157873	TNFRSF14	BLCA,BRCA,CESC,CHOL,HNSC,KICH,KIRC,KIRP,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SARC,TGCT,THYM	KIRP
ENSG00000232442	ENSG00000160602	NEK8	BLCA,CESC,CHOL,COAD,GBM,HNSC,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,MESO,PAAD,PRAD,READ,SKCM,STAD,TGCT,THCA,UCEC,UCS	READ
ENSG00000232442	ENSG00000160959	LRRC14	BLCA,BRCA,CESC,CHOL,COAD,HNSC,KIRC,KIRP,LAML,LIHC,PAAD,READ,THCA,UCS	READ
ENSG00000232442	ENSG00000160972	PPP1R16A	BLCA,BRCA,CESC,COAD,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,OV,PAAD,READ,THCA,UCS	READ
ENSG00000232442	ENSG00000162069	BICDL2	BLCA,COAD,LUAD,PRAD,READ	LUAD
ENSG00000232442	ENSG00000162194	LBHD1	BLCA,CHOL,KIRP,PAAD,UCS	KIRP
ENSG00000232442	ENSG00000164050	PLXNB1	BLCA,COAD,KIRP,READ,UCEC	READ
ENSG00000232442	ENSG00000165644	COMTD1	BLCA,BRCA,CESC,COAD,DLBC,HNSC,KIRC,KIRP,LAML,LGG,LIHC,READ,TGCT,THCA,THYM,UCEC	READ
ENSG00000232442	ENSG00000171045	TSNARE1	BLCA,BRCA,COAD,HNSC,KIRC,READ,THCA	READ
ENSG00000232442	ENSG00000173531	MST1	BLCA,BRCA,CESC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,SKCM,UCEC,UCS,UVM	LUAD
ENSG00000232442	ENSG00000174177	CTU2	BLCA,BRCA,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PRAD,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000174276	ZNHIT2	BLCA,BRCA,CESC,COAD,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000176978	DPP7	BLCA,BRCA,CHOL,DLBC,HNSC,KIRC,LAML,LGG,PAAD,READ,TGCT,THCA,THYM,UCS	READ
ENSG00000232442	ENSG00000177548	RABEP2	BLCA,BRCA,CESC,CHOL,COAD,DLBC,HNSC,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,PAAD,PRAD,SARC,SKCM,TGCT,THCA,THYM,UCEC,UCS	PRAD
ENSG00000232442	ENSG00000180089	TMEM86B	BLCA,CESC,DLBC,KIRP,LAML,MESO,PAAD,PCPG,TGCT,THCA,THYM,UCEC,UCS	KIRP
ENSG00000232442	ENSG00000182173	TSEN54	BLCA,BRCA,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,THCA,THYM,UCS	READ
ENSG00000232442	ENSG00000183828	NUDT14	BLCA,BRCA,CESC,COAD,HNSC,KIRC,KIRP,LAML,MESO,PAAD,PRAD,READ,TGCT,UCEC	READ
ENSG00000232442	ENSG00000184207	PGP	BLCA,BRCA,CESC,COAD,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,READ,SARC,TGCT,THCA,THYM,UCS	READ
ENSG00000232442	ENSG00000184428	TOP1MT	BLCA,BRCA,COAD,HNSC,LIHC,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000185101	ANO9	BLCA,BRCA,CHOL,COAD,DLBC,HNSC,KIRC,KIRP,PAAD,READ,TGCT	COAD,KIRP,READ
ENSG00000232442	ENSG00000185482	STAC3	BLCA,CHOL,KIRC,KIRP,PCPG,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000188747	NOXA1	BLCA,BRCA,COAD,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,READ,SKCM,THCA,UCEC,UCS	READ
ENSG00000232442	ENSG00000189007	ADAT2	BLCA,HNSC,PAAD,READ,SKCM,STAD,THYM,UCS	READ
ENSG00000232442	ENSG00000203772	SPRN	BLCA,BRCA,CHOL,COAD,DLBC,HNSC,KIRP,LIHC,PAAD,READ,TGCT,THYM,UCEC	READ
ENSG00000232442	ENSG00000204348	DXO	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM,UCEC,UCS	READ
ENSG00000232442	ENSG00000205078	SYCE1L	BLCA,CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,MESO,PCPG,PRAD,READ,THYM,UCS	KIRP,LUAD,PRAD,READ
ENSG00000232442	ENSG00000212864	RNF208	BLCA,BRCA,CESC,COAD,HNSC,KIRP,LGG,LIHC,PAAD,READ,THCA,UCS	COAD,READ
ENSG00000232442	ENSG00000213139	CRYGS	BLCA,CHOL,DLBC,KIRP,PAAD,TGCT,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000213397	HAUS7	BLCA,CESC,DLBC,GBM,KIRP,MESO,TGCT,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000214021	TTLL3	BLCA,CHOL,GBM,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,SKCM,UCS	KIRP
ENSG00000232442	ENSG00000215252	GOLGA8B	BLCA,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	KIRP,READ
ENSG00000232442	ENSG00000228300	FAM174C	BLCA,BRCA,CESC,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,MESO,PAAD,PCPG,PRAD,READ,TGCT,THCA,THYM	READ
ENSG00000232442	ENSG00000240230	COX19	BLCA,COAD,DLBC,HNSC,KIRC,KIRP,LIHC,READ,THCA,UCEC,UVM	READ
ENSG00000232442	ENSG00000241343	RPL36A	BLCA,CHOL,DLBC,ESCA,HNSC,KIRC,LAML,LGG,LIHC,MESO,PCPG,PRAD,READ,SKCM,TGCT,THYM,UCEC	PRAD
ENSG00000232442	ENSG00000246705	H2AJ	BLCA,BRCA,CESC,COAD,HNSC,KIRC,LAML,LIHC,PAAD,PRAD,READ,THCA,THYM	PRAD
ENSG00000232442	ENSG00000250067	YJEFN3	BLCA,DLBC,KIRC,KIRP,LGG,PAAD,PRAD,UCEC	KIRP,PRAD
ENSG00000232442	ENSG00000267795	SMIM22	BLCA,CESC,HNSC,OV,PRAD,UCEC,UCS	PRAD
ENSG00000232442	ENSG00000014164	ZC3H3	BRCA,COAD,KICH,KIRC,READ,THCA	READ
ENSG00000232442	ENSG00000051523	CYBA	BRCA,CESC,ESCA,HNSC,KIRC,KIRP,LAML,MESO,READ,TGCT,THCA,THYM	KIRP
ENSG00000232442	ENSG00000076344	RGS11	BRCA,LGG,PAAD,PCPG,PRAD	PRAD
ENSG00000232442	ENSG00000101182	PSMA7	BRCA,CESC,COAD,HNSC,LGG,LIHC,OV,SARC,SKCM,STAD,UVM	COAD
ENSG00000232442	ENSG00000101194	SLC17A9	BRCA,COAD,KIRC,LAML,LUAD,LUSC,TGCT,UCS	COAD,LUAD
ENSG00000232442	ENSG00000102871	TRADD	BRCA,CHOL,HNSC,KICH,KIRP,LAML,LUAD,PRAD,READ,SARC,TGCT,THCA	KIRP
ENSG00000232442	ENSG00000114993	RTKN	BRCA,COAD,KIRC,PRAD,READ,UCS	COAD,READ
ENSG00000232442	ENSG00000116670	MAD2L2	BRCA,CHOL,HNSC,LAML,LGG,MESO,PRAD,READ,THYM	READ
ENSG00000232442	ENSG00000121900	TMEM54	BRCA,KICH,KIRP,LGG,PRAD	KIRP
ENSG00000232442	ENSG00000128626	MRPS12	BRCA,HNSC,LAML,LGG,LIHC,PRAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000131188	PRR7	BRCA,COAD,HNSC,KIRC,KIRP,LAML,LIHC,OV,PAAD,READ,STAD	COAD,KIRP,READ
ENSG00000232442	ENSG00000142669	SH3BGRL3	BRCA,CHOL,KICH,KIRC,KIRP,LAML,TGCT,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000148384	INPP5E	BRCA,CHOL,COAD,GBM,KIRC,KIRP,LAML,LGG,PAAD,READ,SKCM,THCA,UVM	READ
ENSG00000232442	ENSG00000162572	SCNN1D	BRCA,CHOL,GBM,KIRC,KIRP,LAML,LGG,LUAD,MESO,PAAD,PCPG,PRAD,TGCT,THYM,UCEC,UCS	KIRP,LUAD,PRAD
ENSG00000232442	ENSG00000164877	MICALL2	BRCA,COAD,HNSC,KICH,KIRC,KIRP,READ,UCS	KIRP
ENSG00000232442	ENSG00000164885	CDK5	BRCA,COAD,HNSC,KICH,KIRP,LAML,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000165948	IFI27L1	BRCA,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,MESO,PCPG,PRAD,THCA,THYM,UVM	KIRP
ENSG00000232442	ENSG00000166965	RCCD1	BRCA,COAD,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PRAD,READ,THCA,UVM	LUAD
ENSG00000232442	ENSG00000167543	TP53I13	BRCA,CESC,CHOL,COAD,DLBC,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,OV,PCPG,PRAD,READ,THCA	KIRP
ENSG00000232442	ENSG00000167604	NFKBID	BRCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,LUAD,LUSC,MESO,PAAD,PCPG,READ,SARC,SKCM,TGCT,THYM,UCS	KIRP
ENSG00000232442	ENSG00000174943	KCTD13	BRCA,CHOL,COAD,HNSC,KICH,KIRC,KIRP,LAML,LUSC,MESO,PAAD,PCPG,PRAD,READ,TGCT	KIRP,READ
ENSG00000232442	ENSG00000175602	CCDC85B	BRCA,CESC,CHOL,COAD,DLBC,KICH,KIRP,LAML,LGG,LIHC,PAAD,READ,TGCT,THCA,THYM,UCEC	COAD,READ
ENSG00000232442	ENSG00000177989	ODF3B	BRCA,HNSC,KICH,KIRC,KIRP,LAML,LUAD,MESO,OV,PAAD,PRAD,SARC,TGCT,THCA	KIRP
ENSG00000232442	ENSG00000180448	ARHGAP45	BRCA,CHOL,KICH,KIRC,KIRP,LAML,LUAD,LUSC,MESO,PAAD,SKCM,TGCT,THYM	KIRP
ENSG00000232442	ENSG00000185803	SLC52A2	BRCA,COAD,HNSC,KIRC,LAML,LGG,READ	COAD,READ
ENSG00000232442	ENSG00000225697	SLC26A6	BRCA,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PRAD,READ,THYM	LUAD,PRAD
ENSG00000232442	ENSG00000233493	TMEM238	BRCA,CESC,HNSC,LAML,LUAD,MESO,PCPG,PRAD,THCA,THYM	PRAD
ENSG00000232442	ENSG00000242802	AP5Z1	BRCA,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,THCA,THYM	READ
ENSG00000232442	ENSG00000261236	BOP1	BRCA,COAD,HNSC,KICH,KIRC,LAML,LGG,LIHC,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000088727	KIF9	CESC,COAD,OV,PRAD,READ,THCA	COAD
ENSG00000232442	ENSG00000103148	NPRL3	CESC,COAD,HNSC,KIRC,KIRP,LAML,LGG,PAAD,PCPG,PRAD,READ,SARC,THCA,UCS	COAD,READ
ENSG00000232442	ENSG00000103253	HAGHL	CESC,CHOL,DLBC,GBM,HNSC,LAML,LGG,LUSC,OV,PAAD,PCPG,PRAD,UCS	PRAD
ENSG00000232442	ENSG00000103260	METRN	CESC,HNSC,KICH,KIRP,LGG,OV,PCPG,PRAD,THCA,THYM	KIRP
ENSG00000232442	ENSG00000108515	ENO3	CESC,COAD,GBM,LAML,LGG,LUSC,READ,UCEC	READ
ENSG00000232442	ENSG00000109113	RAB34	CESC,HNSC,KICH,KIRP,LAML,LIHC	KIRP
ENSG00000232442	ENSG00000124839	RAB17	CESC,COAD,LUAD,PAAD,PRAD,READ,THCA,UCS	PRAD
ENSG00000232442	ENSG00000137343	ATAT1	CESC,COAD,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LAML,LGG,PAAD,READ,STAD	COAD,READ
ENSG00000232442	ENSG00000141349	G6PC3	CESC,COAD,ESCA,HNSC,KICH,LAML,PRAD,READ,THCA,UCS	READ
ENSG00000232442	ENSG00000167964	RAB26	CESC,LUAD,LUSC,PAAD,PCPG,PRAD	LUAD,PRAD
ENSG00000232442	ENSG00000168612	ZSWIM1	CESC,CHOL,COAD,GBM,HNSC,KIRC,KIRP,LAML,LGG,LIHC,PAAD,READ,SARC,THYM	READ
ENSG00000232442	ENSG00000178026	LRRC75B	CESC,COAD,DLBC,ESCA,HNSC,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,READ,THCA,UCEC,UCS	KIRP,READ
ENSG00000232442	ENSG00000178623	GPR35	CESC,COAD,LAML,READ,UCS	READ
ENSG00000232442	ENSG00000181085	MAPK15	CESC,COAD,HNSC,KIRC,KIRP,OV,READ,STAD,UCS	COAD,KIRP,READ
ENSG00000232442	ENSG00000272752	STAG3L5P-PVRIG2P-PILRB	CESC,CHOL,KIRP,TGCT,THYM,UCEC	KIRP
ENSG00000232442	ENSG00000001497	LAS1L	CHOL,COAD,GBM,HNSC,LGG,PAAD,PCPG,PRAD,THYM,UVM	COAD
ENSG00000232442	ENSG00000010295	IFFO1	CHOL,GBM,KICH,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,THYM,UVM	KIRP
ENSG00000232442	ENSG00000069493	CLEC2D	CHOL,ESCA,GBM,KIRC,KIRP,LGG,LUSC,MESO,PAAD,SKCM,TGCT,THYM,UCS	KIRP
ENSG00000232442	ENSG00000073605	GSDMB	CHOL,GBM,KIRC,KIRP,LGG,LUSC,TGCT,THCA,THYM,UCS	KIRP
ENSG00000232442	ENSG00000101391	CDK5RAP1	CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SARC,THCA,THYM,UCS,UVM	COAD,READ
ENSG00000232442	ENSG00000105486	LIG1	CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD	KIRP
ENSG00000232442	ENSG00000105639	JAK3	CHOL,KIRC,KIRP,PAAD,SKCM,TGCT,THYM	KIRP
ENSG00000232442	ENSG00000119632	IFI27L2	CHOL,HNSC,KIRP,LAML,LGG,PAAD,PCPG,TGCT,THYM	KIRP
ENSG00000232442	ENSG00000122678	POLM	CHOL,COAD,KIRC,KIRP,LAML,LGG,PAAD,READ,THCA,THYM,UCEC	READ
ENSG00000232442	ENSG00000126001	CEP250	CHOL,COAD,KICH,PAAD,READ	READ
ENSG00000232442	ENSG00000126246	IGFLR1	CHOL,KIRC,KIRP,LGG,LUSC,SARC,TGCT,THYM,UCS	KIRP
ENSG00000232442	ENSG00000136717	BIN1	CHOL,COAD,DLBC,KIRP,LIHC,PAAD,THCA	KIRP
ENSG00000232442	ENSG00000139266	MARCHF9	CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,PAAD,PCPG,PRAD,READ,THCA,THYM,UCS	READ
ENSG00000232442	ENSG00000142327	RNPEPL1	CHOL,KIRC,KIRP,LAML,LGG,PRAD,THYM,UCS	KIRP
ENSG00000232442	ENSG00000147162	OGT	CHOL,GBM,KIRC,LUSC,PAAD,READ,SKCM,UVM	READ
ENSG00000232442	ENSG00000147437	GNRH1	CHOL,KIRC,KIRP,PAAD,THYM	KIRP
ENSG00000232442	ENSG00000158555	GDPD5	CHOL,COAD,KIRC,PAAD,UCS	COAD
ENSG00000232442	ENSG00000159314	ARHGAP27	CHOL,KICH,KIRC,KIRP,SKCM,UCS	KIRP
ENSG00000232442	ENSG00000160796	NBEAL2	CHOL,COAD,KIRC,LAML,LUSC	COAD
ENSG00000232442	ENSG00000164535	DAGLB	CHOL,COAD,KICH,KIRC,KIRP,READ,THYM	KIRP
ENSG00000232442	ENSG00000175130	MARCKSL1	CHOL,HNSC,PRAD,THCA,THYM	PRAD
ENSG00000232442	ENSG00000196684	HSH2D	CHOL,KIRC,LAML,LUAD,LUSC,MESO,PAAD,PRAD,SKCM,TGCT	LUAD
ENSG00000232442	ENSG00000197948	FCHSD1	CHOL,COAD,KICH,KIRC,KIRP,LAML,PAAD,SKCM	KIRP
ENSG00000232442	ENSG00000256525	POLG2	CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PRAD,STAD,THCA,THYM,UVM	KIRP,LUAD
ENSG00000232442	ENSG00000273604	EPOP	CHOL,ESCA,HNSC,PAAD,PRAD	PRAD
ENSG00000232442	ENSG00000037897	METTL1	COAD,ESCA,HNSC,LIHC,PRAD,READ,THCA,UCEC	COAD,READ
ENSG00000232442	ENSG00000068438	FTSJ1	COAD,KICH,LAML,LGG,READ	COAD,READ
ENSG00000232442	ENSG00000088356	PDRG1	COAD,DLBC,ESCA,GBM,HNSC,KIRP,LAML,LGG,LIHC,PAAD,PRAD,READ,SARC,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000100983	GSS	COAD,ESCA,GBM,KIRP,LIHC,MESO,PRAD,READ,THYM	KIRP
ENSG00000232442	ENSG00000103037	SETD6	COAD,ESCA,GBM,HNSC,KIRC,KIRP,LUAD,LUSC,READ,THCA,UCS,UVM	COAD,READ
ENSG00000232442	ENSG00000103126	AXIN1	COAD,KICH,KIRC,KIRP,LAML,LGG,PRAD,UCS	KIRP
ENSG00000232442	ENSG00000106077	ABHD11	COAD,KIRC,KIRP,LGG,READ,THCA,UCS	KIRP
ENSG00000232442	ENSG00000106628	POLD2	COAD,DLBC,HNSC,LGG,LIHC,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000118939	UCHL3	COAD,DLBC,ESCA,LIHC,MESO,PRAD,READ,THCA,THYM,UVM	COAD
ENSG00000232442	ENSG00000123179	EBPL	COAD,DLBC,HNSC,LGG,READ,THCA,THYM	COAD,READ
ENSG00000232442	ENSG00000136883	KIF12	COAD,KIRC,KIRP,READ,THCA,UCS	COAD,READ
ENSG00000232442	ENSG00000140451	PIF1	COAD,DLBC,GBM,HNSC,LUSC,READ,SKCM,THYM,UCS	COAD,READ
ENSG00000232442	ENSG00000141570	CBX8	COAD,GBM,HNSC,KICH,KIRC,LIHC,PRAD,READ,THCA	COAD,PRAD,READ
ENSG00000232442	ENSG00000156521	TYSND1	COAD,DLBC,HNSC,KIRC,LAML,LGG,PAAD,READ,THCA,UCS	READ
ENSG00000232442	ENSG00000173621	LRFN4	COAD,DLBC,KICH,KIRP,LGG	COAD
ENSG00000232442	ENSG00000178093	TSSK6	COAD,GBM,LGG,PRAD,READ,THCA	READ
ENSG00000232442	ENSG00000241127	YAE1	COAD,ESCA,KICH,KIRP,LGG,TGCT,THCA,UVM	COAD
ENSG00000232442	ENSG00000242372	EIF6	COAD,KICH,LAML,LGG,LIHC,PRAD,READ,THYM	READ
ENSG00000232442	ENSG00000141378	PTRH2	DLBC,HNSC,KICH,KIRC,KIRP,LGG,LIHC,PRAD	KIRP
ENSG00000232442	ENSG00000160781	PAQR6	DLBC,HNSC,KIRC,KIRP,PAAD,PRAD,UCEC,UCS	KIRP,PRAD
ENSG00000232442	ENSG00000167525	PROCA1	DLBC,GBM,KIRP,LGG,THYM,UCS	KIRP
ENSG00000232442	ENSG00000188130	MAPK12	DLBC,LAML,LGG,MESO,PAAD,PRAD	PRAD
ENSG00000232442	ENSG00000196497	IPO4	DLBC,KIRP,LIHC,LUAD,PAAD,PRAD,THCA,THYM	LUAD
ENSG00000232442	ENSG00000204839	MROH6	DLBC,KIRC,KIRP,LAML,UCS	KIRP
ENSG00000232442	ENSG00000258839	MC1R	ESCA,KIRP,LGG,LUSC,PAAD,PCPG,THCA,UVM	KIRP
ENSG00000232442	ENSG00000082014	SMARCD3	GBM,KIRC,KIRP,LGG,THCA	KIRP
ENSG00000232442	ENSG00000102109	PCSK1N	GBM,HNSC,KIRP,LGG,PCPG,PRAD	PRAD
ENSG00000232442	ENSG00000129946	SHC2	GBM,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,PRAD,THCA	KIRP,PRAD
ENSG00000232442	ENSG00000160323	ADAMTS13	GBM,KIRP,LGG,PAAD,UCEC,UCS,UVM	KIRP
ENSG00000232442	ENSG00000186395	KRT10	GBM,KICH,KIRC,KIRP,LGG,MESO,PRAD,THCA,UVM	KIRP
ENSG00000232442	ENSG00000240038	AMY2B	GBM,KIRC,KIRP,LGG,THCA	KIRP
ENSG00000232442	ENSG00000105327	BBC3	HNSC,KIRC,KIRP,LAML,PRAD,READ	KIRP,READ
ENSG00000232442	ENSG00000175938	ORAI3	HNSC,KICH,KIRC,KIRP,LGG,LIHC,PCPG,PRAD,TGCT,THCA,THYM,UCS	KIRP
ENSG00000232442	ENSG00000204681	GABBR1	HNSC,KIRC,KIRP,PAAD,SKCM,UVM	KIRP
ENSG00000232442	ENSG00000115257	PCSK4	KICH,KIRC,KIRP,LGG,LUAD,PCPG,TGCT,THCA,THYM	KIRP
ENSG00000232442	ENSG00000241404	EGFL8	KIRP,LGG,SKCM,UCS,UVM	KIRP

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000160783	PMF1	6	BLCA,BRCA,HNSC,KIRC,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000104883	PEX11G	5	BLCA,HNSC,KIRP,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000177225	GATD1	6	BLCA,BRCA,HNSC,KIRC,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000124222	STX16	10	BLCA,CHOL,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000102103	PQBP1	7	BLCA,BRCA,CHOL,HNSC,PAAD,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000114735	HEMK1	8	BLCA,CHOL,KIRC,KIRP,LGG,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000148343	MIGA2	8	BLCA,CHOL,HNSC,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000103037	SETD6	6	HNSC,KIRC,KIRP,LUAD,LUSC,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000160993	ALKBH4	7	BLCA,BRCA,CHOL,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000116691	MIIP	7	BLCA,BRCA,CHOL,KIRP,LGG,PAAD,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000187650	VMAC	6	CHOL,HNSC,KIRC,KIRP,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000099326	MZF1	12	BLCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000158863	FAM160B2	7	CHOL,HNSC,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000215375	MYL5	8	BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LUAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000067365	METTL22	6	KIRC,LGG,LUAD,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000072609	CHFR	6	CHOL,KIRC,KIRP,LGG,PAAD,PCPG
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000068400	GRIPAP1	5	CHOL,KIRC,LUAD,LUSC,PAAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000125458	NT5C	7	BLCA,BRCA,CHOL,KIRC,KIRP,LGG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000106246	PTCD1	9	BLCA,BRCA,CHOL,HNSC,KIRP,LGG,PAAD,TGCT,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000134884	ARGLU1	10	BLCA,CHOL,HNSC,KIRC,KIRP,LGG,LUSC,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000134262	AP4B1	7	BLCA,CHOL,HNSC,KIRC,LGG,LUSC,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000102125	TAZ	12	BRCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000161179	YDJC	6	BRCA,CHOL,HNSC,KIRP,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000095059	DHPS	8	BLCA,CHOL,HNSC,KIRC,KIRP,PAAD,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000196642	RABL6	6	BRCA,CHOL,HNSC,KIRC,KIRP,PAAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000104936	DMPK	6	KIRC,KIRP,LGG,LUSC,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000125656	CLPP	5	BRCA,HNSC,LGG,PAAD,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000099804	CDC34	6	BLCA,BRCA,KIRC,KIRP,LGG,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000110455	ACCS	6	BLCA,CHOL,KIRC,KIRP,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000177548	RABEP2	11	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LUAD,LUSC,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000167280	ENGASE	12	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000105443	CYTH2	6	BLCA,HNSC,KIRC,KIRP,LGG,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000266967	AARSD1	11	BLCA,CHOL,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PRAD,TGCT,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000165724	ZMYND19	6	BRCA,CHOL,HNSC,KIRC,KIRP,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000166432	ZMAT1	7	CHOL,KIRC,KIRP,LGG,PAAD,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000249115	HAUS5	7	BRCA,CHOL,HNSC,KIRC,LGG,PAAD,PCPG
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000102738	MRPS31	5	CHOL,KIRP,PAAD,TGCT,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000105072	C19orf44	5	HNSC,KIRC,KIRP,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000065268	WDR18	7	BRCA,HNSC,KIRC,LGG,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000196405	EVL	7	CHOL,HNSC,KIRC,LUSC,PAAD,PCPG,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000146826	TRAPPC14	7	BRCA,CHOL,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000174915	PTDSS2	5	BRCA,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000070423	RNF126	12	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000105717	PBX4	5	BLCA,CHOL,KIRP,LUAD,TGCT
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000100083	GGA1	12	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000101158	NELFCD	5	BLCA,HNSC,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000130714	POMT1	5	CHOL,HNSC,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000004534	RBM6	12	BLCA,CHOL,HNSC,KIRC,KIRP,LGG,LUAD,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000099821	POLRMT	10	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000204237	OXLD1	10	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,PAAD,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000064547	LPAR2	5	BLCA,HNSC,LGG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000003756	RBM5	9	BLCA,CHOL,HNSC,KIRC,KIRP,LGG,LUSC,PAAD,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000198917	SPOUT1	6	CHOL,HNSC,KIRC,KIRP,LGG,PAAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000132199	ENOSF1	5	KIRC,KIRP,LUSC,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000139190	VAMP1	8	CHOL,KIRC,KIRP,LUAD,LUSC,PAAD,PCPG,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000132680	KHDC4	7	BLCA,KIRC,KIRP,LGG,LUAD,LUSC,PRAD
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000185917	SETD4	7	BLCA,HNSC,KIRC,KIRP,LGG,PAAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000185298	CCDC137	7	BRCA,CHOL,HNSC,KIRP,LGG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000118162	KPTN	7	BRCA,KIRC,LGG,PAAD,PCPG,PRAD,THCA
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000185024	BRF1	11	BLCA,BRCA,CHOL,HNSC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,THCA

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000232442	ENSG00000130254	SAFB2	ENSG00000085491	SLC25A24	5	KIRC,KIRP,LUAD,PAAD,THCA

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000232442	ENST00000449500	PLD1	ENSG00000075651	ENST00000446289	-0.1121	17	-	COAD
ENSG00000232442	ENST00000411579	ACSL4	ENSG00000068366	ENST00000514500	-0.1222	1	-	KIRP,PRAD
ENSG00000232442	ENST00000411579	PLD1	ENSG00000075651	ENST00000446289	-0.1851	41	-	COAD
ENSG00000232442	ENST00000449500	SNX7	ENSG00000162627	ENST00000529992	-0.1341	1	-	PRAD
ENSG00000232442	ENST00000449500	B3GNT5	ENSG00000176597	ENST00000465010	-0.1957	275	-	READ
ENSG00000232442	ENST00000411579	B3GNT5	ENSG00000176597	ENST00000465010	-0.1957	173	-	READ
ENSG00000232442	ENST00000449500	SLMAP	ENSG00000163681	ENST00000416658	-0.1127	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SLMAP	ENSG00000163681	ENST00000495364	-0.1940	59	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SLMAP	ENSG00000163681	ENST00000494088	-0.1827	55	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SLMAP	ENSG00000163681	ENST00000460223	-0.1127	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	HEG1	ENSG00000173706	ENST00000482699	-0.1148	5	-	KIRP,LUAD
ENSG00000232442	ENST00000449500	PPP1R12A	ENSG00000058272	ENST00000550299	-0.1734	500	-	READ
ENSG00000232442	ENST00000449500	PPP1R12A	ENSG00000058272	ENST00000546369	-0.5400	527	-	READ
ENSG00000232442	ENST00000449500	AHNAK	ENSG00000124942	ENST00000530124	-0.1218	9	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	SLMAP	ENSG00000163681	ENST00000416658	-0.1632	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SLMAP	ENSG00000163681	ENST00000495364	-0.1940	36	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SLMAP	ENSG00000163681	ENST00000494088	-0.1632	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	PPP1R12A	ENSG00000058272	ENST00000550299	-0.1734	398	-	READ
ENSG00000232442	ENST00000411579	PPP1R12A	ENSG00000058272	ENST00000546369	-0.5400	425	-	READ
ENSG00000232442	ENST00000411579	AHNAK	ENSG00000124942	ENST00000530124	-0.1068	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	AHNAK	ENSG00000124942	ENST00000257247	-0.1048	310	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	ABHD5	ENSG00000011198	ENST00000413300	-0.1753	247	-	COAD
ENSG00000232442	ENST00000449500	WWTR1	ENSG00000018408	ENST00000465804	-0.1001	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	WWTR1	ENSG00000018408	ENST00000467467	-0.1177	66	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	ABHD5	ENSG00000011198	ENST00000413300	-0.1753	145	-	COAD
ENSG00000232442	ENST00000411579	WWTR1	ENSG00000018408	ENST00000465804	-0.1285	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	WWTR1	ENSG00000018408	ENST00000467467	-0.1929	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	VCL	ENSG00000035403	ENST00000372755	-0.1234	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	PTPN21	ENSG00000070778	ENST00000553531	-0.1181	48	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	ATP2B1	ENSG00000070961	ENST00000393164	-0.1066	152	-	COAD,READ
ENSG00000232442	ENST00000449500	ATP8B1	ENSG00000081923	ENST00000591728	-0.1320	65	-	KIRP,COAD,READ
ENSG00000232442	ENST00000449500	UGDH	ENSG00000109814	ENST00000507089	-0.1584	541	-	COAD,READ
ENSG00000232442	ENST00000449500	PLSCR4	ENSG00000114698	ENST00000446574	-0.1369	70	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	PLSCR4	ENSG00000114698	ENST00000493382	-0.1809	20	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	NRP2	ENSG00000118257	ENST00000417189	-0.1162	61	-	PRAD,READ
ENSG00000232442	ENST00000449500	NRP2	ENSG00000118257	ENST00000357785	-0.1467	43	-	PRAD,READ
ENSG00000232442	ENST00000449500	TEK	ENSG00000120156	ENST00000519097	-0.1014	1	-	KIRP,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	TEK	ENSG00000120156	ENST00000406359	-0.1014	1	-	KIRP,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	SSPN	ENSG00000123096	ENST00000540266	-0.3600	131	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SSPN	ENSG00000123096	ENST00000535504	-0.1526	574	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	PALLD	ENSG00000129116	ENST00000505667	-0.1701	55	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	PALLD	ENSG00000129116	ENST00000512127	-0.2207	110	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	PALLD	ENSG00000129116	ENST00000503290	-0.1362	240	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	IL6ST	ENSG00000134352	ENST00000502326	-0.1519	154	-	COAD,READ
ENSG00000232442	ENST00000411579	TMCC3	ENSG00000057704	ENST00000261226	-0.1123	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	TMCC3	ENSG00000057704	ENST00000551457	-0.1123	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	PTPN21	ENSG00000070778	ENST00000553531	-0.1073	17	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	PTPN21	ENSG00000070778	ENST00000536337	-0.1106	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	EPB41L3	ENSG00000082397	ENST00000400111	-0.1366	1	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	EPB41L3	ENSG00000082397	ENST00000540638	-0.1037	1	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	UGDH	ENSG00000109814	ENST00000507089	-0.2145	439	-	COAD,READ
ENSG00000232442	ENST00000411579	PLSCR4	ENSG00000114698	ENST00000493382	-0.1542	407	-	LUAD,COAD,READ
ENSG00000232442	ENST00000411579	NRP2	ENSG00000118257	ENST00000417189	-0.1478	236	-	PRAD,READ
ENSG00000232442	ENST00000411579	NRP2	ENSG00000118257	ENST00000357785	-0.1467	20	-	PRAD,READ
ENSG00000232442	ENST00000411579	SSPN	ENSG00000123096	ENST00000540266	-0.3684	108	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SSPN	ENSG00000123096	ENST00000535504	-0.1526	472	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	PALLD	ENSG00000129116	ENST00000505667	-0.1701	32	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	PALLD	ENSG00000129116	ENST00000512127	-0.1445	24	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	PALLD	ENSG00000129116	ENST00000503290	-0.1362	138	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SYT11	ENSG00000132718	ENST00000368324	-0.1338	1	-	COAD,READ
ENSG00000232442	ENST00000411579	IL6ST	ENSG00000134352	ENST00000502326	-0.8562	57	-	COAD,READ
ENSG00000232442	ENST00000449500	APPL2	ENSG00000136044	ENST00000546731	-0.1323	1	-	COAD,READ
ENSG00000232442	ENST00000449500	APPL2	ENSG00000136044	ENST00000551662	-0.1488	66	-	COAD,READ
ENSG00000232442	ENST00000411579	ATP6V1A	ENSG00000114573	ENST00000273398	-0.1306	1	-	KIRP
ENSG00000232442	ENST00000411579	SLC17A5	ENSG00000119899	ENST00000355773	-0.1198	38	-	READ
ENSG00000232442	ENST00000411579	APPL2	ENSG00000136044	ENST00000546731	-0.1571	1	-	COAD,READ
ENSG00000232442	ENST00000411579	APPL2	ENSG00000136044	ENST00000551662	-0.1598	43	-	COAD,READ
ENSG00000232442	ENST00000411579	MR1	ENSG00000153029	ENST00000367579	-0.1809	1	-	PRAD
ENSG00000232442	ENST00000449500	IQGAP2	ENSG00000145703	ENST00000396234	-0.1794	102	-	KIRP,COAD,READ
ENSG00000232442	ENST00000449500	IQGAP2	ENSG00000145703	ENST00000502745	-0.1794	95	-	KIRP,COAD,READ
ENSG00000232442	ENST00000449500	IQGAP2	ENSG00000145703	ENST00000513534	-0.1598	263	-	KIRP,COAD,READ
ENSG00000232442	ENST00000449500	ATP5F1A	ENSG00000152234	ENST00000593152	-0.1036	88	-	READ
ENSG00000232442	ENST00000449500	ATP5F1A	ENSG00000152234	ENST00000282050	-0.1036	88	-	READ
ENSG00000232442	ENST00000449500	ATP5F1A	ENSG00000152234	ENST00000590665	-0.1036	94	-	READ
ENSG00000232442	ENST00000449500	ATP5F1A	ENSG00000152234	ENST00000585650	-0.1040	1	-	READ
ENSG00000232442	ENST00000449500	TRAPPC8	ENSG00000153339	ENST00000581057	-0.1023	1	-	READ
ENSG00000232442	ENST00000449500	MIDEAS	ENSG00000156030	ENST00000394071	-0.1009	1	-	COAD
ENSG00000232442	ENST00000449500	MIDEAS	ENSG00000156030	ENST00000286523	-0.1009	1	-	COAD
ENSG00000232442	ENST00000449500	MIDEAS	ENSG00000156030	ENST00000423556	-0.2406	108	-	COAD
ENSG00000232442	ENST00000449500	ZFYVE9	ENSG00000157077	ENST00000357206	-0.1471	1	-	KIRP,LUAD
ENSG00000232442	ENST00000449500	ANTXR2	ENSG00000163297	ENST00000404191	-0.2409	310	-	COAD,READ
ENSG00000232442	ENST00000449500	ANTXR2	ENSG00000163297	ENST00000346652	-0.1835	153	-	COAD,READ
ENSG00000232442	ENST00000449500	SMIM14	ENSG00000163683	ENST00000295958	-0.1035	1	-	COAD,READ
ENSG00000232442	ENST00000449500	SNRK	ENSG00000163788	ENST00000437827	-0.1955	1	-	LUAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000532063	-0.1088	111	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000299421	-0.1124	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000537806	-0.1447	21	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000420936	-0.1447	23	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000528995	-0.1124	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000396751	-0.1124	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	ILK	ENSG00000166333	ENST00000526318	-0.1160	111	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	HPSE	ENSG00000173083	ENST00000512196	-0.8163	205	-	READ
ENSG00000232442	ENST00000449500	TCP11L1	ENSG00000176148	ENST00000531632	-0.1693	28	-	COAD,READ
ENSG00000232442	ENST00000449500	CHP1	ENSG00000187446	ENST00000334660	-0.1231	1	-	COAD,READ
ENSG00000232442	ENST00000449500	CHP1	ENSG00000187446	ENST00000560784	-0.1085	40	-	COAD,READ
ENSG00000232442	ENST00000449500	CHP1	ENSG00000187446	ENST00000560397	-0.6900	705	-	COAD,READ
ENSG00000232442	ENST00000449500	CHP1	ENSG00000187446	ENST00000560965	-0.4710	466	-	COAD,READ
ENSG00000232442	ENST00000411579	IQGAP2	ENSG00000145703	ENST00000513534	-0.1598	161	-	KIRP,COAD,READ
ENSG00000232442	ENST00000411579	ATP5F1A	ENSG00000152234	ENST00000398752	-0.1436	1	-	READ
ENSG00000232442	ENST00000411579	ATP5F1A	ENSG00000152234	ENST00000592364	-0.1011	1	-	READ
ENSG00000232442	ENST00000411579	TRAPPC8	ENSG00000153339	ENST00000582539	-0.1157	64	-	READ
ENSG00000232442	ENST00000411579	MIDEAS	ENSG00000156030	ENST00000394071	-0.1399	1	-	COAD
ENSG00000232442	ENST00000411579	MIDEAS	ENSG00000156030	ENST00000286523	-0.1399	1	-	COAD
ENSG00000232442	ENST00000411579	MIDEAS	ENSG00000156030	ENST00000423556	-0.1849	22	-	COAD
ENSG00000232442	ENST00000411579	ZFYVE9	ENSG00000157077	ENST00000357206	-0.1077	1	-	KIRP,LUAD
ENSG00000232442	ENST00000411579	ANTXR2	ENSG00000163297	ENST00000404191	-0.1882	97	-	COAD,READ
ENSG00000232442	ENST00000411579	ANTXR2	ENSG00000163297	ENST00000346652	-0.7144	19	-	COAD,READ
ENSG00000232442	ENST00000411579	SMIM14	ENSG00000163683	ENST00000295958	-0.1109	1	-	COAD,READ
ENSG00000232442	ENST00000411579	SNRK	ENSG00000163788	ENST00000437827	-0.1098	75	-	LUAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000532063	-0.2260	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000299421	-0.2260	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000537806	-0.1304	9	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000420936	-0.1304	11	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000528995	-0.1242	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000396751	-0.2260	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	ILK	ENSG00000166333	ENST00000526318	-0.2260	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	HPSE	ENSG00000173083	ENST00000311412	-0.1119	1	-	READ
ENSG00000232442	ENST00000411579	HPSE	ENSG00000173083	ENST00000405413	-0.1119	1	-	READ
ENSG00000232442	ENST00000411579	HPSE	ENSG00000173083	ENST00000512196	-0.6017	196	-	READ
ENSG00000232442	ENST00000411579	TCP11L1	ENSG00000176148	ENST00000528107	-0.1017	1	-	COAD,READ
ENSG00000232442	ENST00000411579	TCP11L1	ENSG00000176148	ENST00000531632	-0.1079	37	-	COAD,READ
ENSG00000232442	ENST00000411579	CHP1	ENSG00000187446	ENST00000334660	-0.1769	1	-	COAD,READ
ENSG00000232442	ENST00000411579	CHP1	ENSG00000187446	ENST00000560397	-0.6783	548	-	COAD,READ
ENSG00000232442	ENST00000411579	CHP1	ENSG00000187446	ENST00000560965	-0.4710	364	-	COAD,READ
ENSG00000232442	ENST00000449500	DNAJC11	ENSG00000007923	ENST00000451196	-0.1166	74	-	KIRP
ENSG00000232442	ENST00000449500	DNAJC11	ENSG00000007923	ENST00000294401	-0.1061	1	-	KIRP
ENSG00000232442	ENST00000449500	MYLK	ENSG00000065534	ENST00000346322	-0.1797	604	-	KIRP,PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	MYLK	ENSG00000065534	ENST00000583087	-0.2979	419	-	KIRP,PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	SMARCA2	ENSG00000080503	ENST00000382186	-0.3710	190	-	KIRP
ENSG00000232442	ENST00000411579	MYLK	ENSG00000065534	ENST00000346322	-0.1797	502	-	KIRP,PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	MYLK	ENSG00000065534	ENST00000583087	-0.2979	317	-	KIRP,PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	SMARCA2	ENSG00000080503	ENST00000382186	-0.3227	4	-	KIRP
ENSG00000232442	ENST00000449500	HMGCR	ENSG00000113161	ENST00000509085	-0.1043	182	-	KIRP
ENSG00000232442	ENST00000449500	HMGCR	ENSG00000113161	ENST00000511986	-0.1064	183	-	KIRP
ENSG00000232442	ENST00000411579	HMGCR	ENSG00000113161	ENST00000509085	-0.1088	64	-	KIRP
ENSG00000232442	ENST00000411579	HMGCR	ENSG00000113161	ENST00000511986	-0.1088	64	-	KIRP
ENSG00000232442	ENST00000449500	PKD2	ENSG00000118762	ENST00000508588	-0.1239	40	-	READ
ENSG00000232442	ENST00000449500	PKD2	ENSG00000118762	ENST00000502363	-0.5900	378	-	READ
ENSG00000232442	ENST00000449500	ITPR2	ENSG00000123104	ENST00000242737	-0.3237	614	-	KIRP
ENSG00000232442	ENST00000411579	PKD2	ENSG00000118762	ENST00000508588	-0.1051	13	-	READ
ENSG00000232442	ENST00000411579	PKD2	ENSG00000118762	ENST00000502363	-0.5900	276	-	READ
ENSG00000232442	ENST00000411579	ITPR2	ENSG00000123104	ENST00000242737	-0.3237	512	-	KIRP
ENSG00000232442	ENST00000449500	TACC1	ENSG00000147526	ENST00000520340	-0.1803	153	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000449500	TACC1	ENSG00000147526	ENST00000518415	-0.1183	44	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000449500	TACC1	ENSG00000147526	ENST00000520973	-0.1042	6	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000449500	TACC1	ENSG00000147526	ENST00000521866	-0.1183	34	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000411579	TACC1	ENSG00000147526	ENST00000520340	-0.1193	241	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000411579	TACC1	ENSG00000147526	ENST00000518415	-0.1183	21	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000411579	TACC1	ENSG00000147526	ENST00000520973	-0.1081	1	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000411579	TACC1	ENSG00000147526	ENST00000521866	-0.1183	11	-	KIRP,PRAD,LUAD,READ
ENSG00000232442	ENST00000449500	AFF1	ENSG00000172493	ENST00000544085	-0.7420	519	-	READ
ENSG00000232442	ENST00000449500	F2R	ENSG00000181104	ENST00000505600	-0.5800	237	-	KIRP
ENSG00000232442	ENST00000411579	AFF1	ENSG00000172493	ENST00000544085	-0.7420	417	-	READ
ENSG00000232442	ENST00000411579	ANO6	ENSG00000177119	ENST00000425752	-0.1661	411	-	PRAD
ENSG00000232442	ENST00000411579	F2R	ENSG00000181104	ENST00000505600	-0.5800	135	-	KIRP
ENSG00000232442	ENST00000411579	GAB1	ENSG00000109458	ENST00000511836	-0.1241	1	-	LUAD,COAD,READ
ENSG00000232442	ENST00000449500	HACD3	ENSG00000074696	ENST00000565299	-0.1452	85	-	KIRP
ENSG00000232442	ENST00000449500	GPRC5B	ENSG00000167191	ENST00000569847	-0.1740	79	-	KIRP,PRAD
ENSG00000232442	ENST00000411579	GPRC5B	ENSG00000167191	ENST00000569847	-0.1740	56	-	KIRP,PRAD
ENSG00000232442	ENST00000449500	NPTN	ENSG00000156642	ENST00000562924	-0.1158	221	-	READ
ENSG00000232442	ENST00000449500	PINK1	ENSG00000158828	ENST00000321556	-0.1025	1	-	KIRP,COAD,READ
ENSG00000232442	ENST00000449500	DDR2	ENSG00000162733	ENST00000367921	-0.1250	297	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	DDR2	ENSG00000162733	ENST00000458105	-0.3373	373	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	DDR2	ENSG00000162733	ENST00000433757	-0.1140	262	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000449500	FYCO1	ENSG00000163820	ENST00000438446	-0.3725	1	-	READ
ENSG00000232442	ENST00000449500	TLR3	ENSG00000164342	ENST00000296795	-0.1024	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	TLR3	ENSG00000164342	ENST00000504367	-0.3425	780	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SNX18	ENSG00000178996	ENST00000326277	-0.1191	247	-	KIRP
ENSG00000232442	ENST00000449500	NCOA4	ENSG00000266412	ENST00000579039	-0.1097	115	-	COAD,READ
ENSG00000232442	ENST00000411579	NPTN	ENSG00000156642	ENST00000562924	-0.1116	119	-	READ
ENSG00000232442	ENST00000411579	PINK1	ENSG00000158828	ENST00000321556	-0.1357	1	-	KIRP,COAD,READ
ENSG00000232442	ENST00000411579	DDR2	ENSG00000162733	ENST00000367921	-0.1250	195	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	DDR2	ENSG00000162733	ENST00000458105	-0.1831	124	-	PRAD,LUAD,COAD,READ
ENSG00000232442	ENST00000411579	FYCO1	ENSG00000163820	ENST00000438446	-0.1451	119	-	READ
ENSG00000232442	ENST00000411579	TLR3	ENSG00000164342	ENST00000296795	-0.1433	1	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	TLR3	ENSG00000164342	ENST00000504367	-0.6550	551	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SNX18	ENSG00000178996	ENST00000326277	-0.1191	145	-	KIRP
ENSG00000232442	ENST00000449500	KIF13B	ENSG00000197892	ENST00000523130	-1.0125	167	-	COAD,READ
ENSG00000232442	ENST00000449500	USP46	ENSG00000109189	ENST00000508499	-0.6140	353	-	KIRP
ENSG00000232442	ENST00000449500	USP46	ENSG00000109189	ENST00000512656	-0.2002	34	-	KIRP
ENSG00000232442	ENST00000449500	WLS	ENSG00000116729	ENST00000354777	-0.1135	1	-	KIRP,READ
ENSG00000232442	ENST00000449500	WLS	ENSG00000116729	ENST00000527864	-0.1276	82	-	KIRP,READ
ENSG00000232442	ENST00000449500	WLS	ENSG00000116729	ENST00000370971	-0.1998	383	-	KIRP,READ
ENSG00000232442	ENST00000411579	KIF13B	ENSG00000197892	ENST00000523130	-0.7860	116	-	COAD,READ
ENSG00000232442	ENST00000411579	USP46	ENSG00000109189	ENST00000514536	-0.1114	1	-	KIRP
ENSG00000232442	ENST00000411579	USP46	ENSG00000109189	ENST00000508499	-0.3096	94	-	KIRP
ENSG00000232442	ENST00000411579	USP46	ENSG00000109189	ENST00000512656	-0.2002	11	-	KIRP
ENSG00000232442	ENST00000411579	WLS	ENSG00000116729	ENST00000354777	-0.1135	1	-	KIRP,READ
ENSG00000232442	ENST00000411579	WLS	ENSG00000116729	ENST00000527864	-0.1384	39	-	KIRP,READ
ENSG00000232442	ENST00000411579	WLS	ENSG00000116729	ENST00000370971	-0.1998	281	-	KIRP,READ
ENSG00000232442	ENST00000449500	NEO1	ENSG00000067141	ENST00000560262	-0.4469	167	-	COAD,READ
ENSG00000232442	ENST00000449500	NEO1	ENSG00000067141	ENST00000558964	-0.4469	167	-	COAD,READ
ENSG00000232442	ENST00000411579	NEO1	ENSG00000067141	ENST00000560262	-0.3907	2	-	COAD,READ
ENSG00000232442	ENST00000411579	NEO1	ENSG00000067141	ENST00000558964	-0.3907	2	-	COAD,READ
ENSG00000232442	ENST00000449500	LARGE1	ENSG00000133424	ENST00000609799	-0.8889	203	-	PRAD,COAD,READ
ENSG00000232442	ENST00000449500	SUCLG2	ENSG00000172340	ENST00000493112	-0.1114	102	-	COAD,READ
ENSG00000232442	ENST00000449500	CDK14	ENSG00000058091	ENST00000431029	-0.1032	33	-	READ
ENSG00000232442	ENST00000411579	LARGE1	ENSG00000133424	ENST00000609799	-0.5838	229	-	PRAD,COAD,READ
ENSG00000232442	ENST00000411579	SUCLG2	ENSG00000172340	ENST00000493112	-0.1844	1	-	COAD,READ
ENSG00000232442	ENST00000449500	SOS2	ENSG00000100485	ENST00000543680	-0.1793	200	-	COAD,READ
ENSG00000232442	ENST00000449500	SOS2	ENSG00000100485	ENST00000556452	-0.1710	99	-	COAD,READ
ENSG00000232442	ENST00000411579	SOS2	ENSG00000100485	ENST00000543680	-1.2075	28	-	COAD,READ
ENSG00000232442	ENST00000411579	SOS2	ENSG00000100485	ENST00000556452	-0.1219	190	-	COAD,READ
ENSG00000232442	ENST00000449500	SEC23A	ENSG00000100934	ENST00000557280	-0.2040	224	-	PRAD
ENSG00000232442	ENST00000449500	SEC23A	ENSG00000100934	ENST00000553970	-0.2040	224	-	PRAD
ENSG00000232442	ENST00000449500	PPP2CB	ENSG00000104695	ENST00000523023	-0.1276	540	-	READ
ENSG00000232442	ENST00000449500	PPP2CB	ENSG00000104695	ENST00000520334	-0.1072	353	-	READ
ENSG00000232442	ENST00000449500	KLHL5	ENSG00000109790	ENST00000515612	-0.3119	38	-	PRAD,READ
ENSG00000232442	ENST00000449500	LPCAT3	ENSG00000111684	ENST00000535479	-0.1529	287	-	LUAD,COAD
ENSG00000232442	ENST00000449500	LPCAT3	ENSG00000111684	ENST00000261407	-0.1529	287	-	LUAD,COAD
ENSG00000232442	ENST00000449500	VPS4B	ENSG00000119541	ENST00000591519	-0.2948	576	-	COAD,READ
ENSG00000232442	ENST00000411579	SEC23A	ENSG00000100934	ENST00000557280	-0.1356	122	-	PRAD
ENSG00000232442	ENST00000411579	SEC23A	ENSG00000100934	ENST00000553970	-0.1356	122	-	PRAD
ENSG00000232442	ENST00000411579	PPP2CB	ENSG00000104695	ENST00000523023	-0.2231	438	-	READ
ENSG00000232442	ENST00000411579	PPP2CB	ENSG00000104695	ENST00000520334	-0.1072	251	-	READ
ENSG00000232442	ENST00000411579	KLHL5	ENSG00000109790	ENST00000515612	-0.3119	15	-	PRAD,READ
ENSG00000232442	ENST00000411579	LPCAT3	ENSG00000111684	ENST00000535479	-0.1966	185	-	LUAD,COAD
ENSG00000232442	ENST00000411579	LPCAT3	ENSG00000111684	ENST00000261407	-0.1966	185	-	LUAD,COAD
ENSG00000232442	ENST00000411579	VPS4B	ENSG00000119541	ENST00000591519	-0.2948	474	-	COAD,READ

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000232442.1	ENST00000449500.1	64	264	70
ENSG00000232442.1	ENST00000411579.1	107	4	327

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential