 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | TSPYL2,KRCC1,VAMP1,RNF141,HELQ,OXNAD1,MFSD8,DNAJC27,SPATA13,MZF1,MCEE,MAPK8IP3,SUGP2,VAMP4,N4BP2L2,TANK,MKNK1,SLF2,L3HYPDH,ANKRD44,DMTF1,UNKL,CD69,ING1,GPCPD1,ISCU,ZFAND5,IRAK4,SLC25A40,VMP1,ZFP14,CENATAC,NPEPL1,WDR5B,ST7L,KLHL28,KCTD13,MSANTD2,TUBGCP6,CCDC14,FAM200A,RSF1,OSER1,AFF4,MYO9A,CLK4,GIMAP7,FAM133B,ZBED5,EIF2B5,INPP5B,SETD2,CD37,TTC14,KNTC1,CREB1,SLC2A11,TAZ,NAA80,CAPN7,TMEM106A,GIT2,CLCN6,ECHDC2,OGT,NOD1,SCML1,ARIH1,IGIP,RAPGEF6,ARID4B,ASH1L,POLG2,CLOCK,NFIA,TUT4,RBM15,FAN1,ANAPC10,BBIP1,FLI1,THOC2,CLK1,ATXN7,MRRF,RABL2A,ARMC10,OFD1,PEAK1,ACYP1,RFX7,TMEM243,HCFC2,VTI1A,SLC35A5,PURA,KDM7A,MIER1,RSRC2,HSH2D,NPAT,NAPB,NAA25,CBX7,MAP3K14,SETD5,ZFP62,GON4L,SAMSN1,DOCK10,C9orf72,ZBED8,CHIC1,ORMDL1,CHD9,BRAF,BACH1,MBD4,AGO3,ORC2,OSBPL3,NFKBIZ,C1orf52,PHC3,CDK11A,POGLUT1,DOK3,LRRC37B,RASGEF1B,SKIL,SUPT20H,CCDC191,ADHFE1,DCUN1D2,ANKRD28,NR2C2,PAN2,TIMM10B,SLC25A16,GIGYF1,CD72,PDK1,SLC25A28,METTL4,TMEM126B,GLS,ATG2B,ZFC3H1,MIOS,MBTD1,DMAC2L,N4BP2L1,SEPSECS,HEXD,ARHGEF7,AP4E1,CCNT1,VCPKMT,TMEM50B,CEP192,EIF4A1,PIK3C2A,RINT1,FAM204A,VPS13A,POLM,TXNIP,ZNF69,DNAJC24,PGGT1B,STXBP5,ATF7IP,PIP4K2A,IKZF3,GCA,MARCHF6,LONRF1,LTN1,HERC4,TMEM168,RAB28,ATM,CEP20,PDCD10,STAMBPL1,FANCL,STK17B,SP140,TTC17,CDK13,LENG8,MED7,SH2B1,FBXL3,FAM98C,UBE2G2,HOOK3,IP6K2,ARIH2,SPICE1,PPWD1,RELCH,MLLT6,RBM27,ATG12,AHI1,INO80D,SAMD8,ICE2,AGK,RORA,CRLF3,CNOT6L,PHF7,DDX55,CASP2,KRIT1,IPMK,FAM111A,USP53,COG5,ACYP2,THOC1,ANKMY1,ZNF25,TRNT1,ACAP2,AKNA,UBR1,NUMA1,DENND6A,UGGT2,ZMYM5,C2CD3,TAMM41,OXR1,RC3H1,CBLB,XPO4,PCID2,ZNF44,DENND11,SMG1,TAF7,FGFR1OP2,LYSMD3,RIMKLB,TRAF1,BCLAF3,DNAJB14,PUS7L,MEIS1,BBS2,IFT80,CTBS,CD47,CEP83,UBN2,METTL23,ERCC6L2,NFKBID,C17orf75,P4HTM,ABHD18,REV3L,SLC5A3,NRBP2,CREBRF,MECP2,TARS3,ZNF41,REEP5,ZC3H8,LATS1,DGKE,TRAPPC6B,DZIP3,RAB2B,ANKRD49,PAXBP1,DNAJC19,ACOT9,TNFRSF13C,EPS15,GANC,COA1,SGTB,TADA2A,FNBP4,GOLT1B,JADE2,BOD1L1,PHF11,RSRP1,TMF1,SSH2,NEK8,ERO1B,MLLT10,MYO5A,GOLGA4,TRAPPC13,UNC50,CLEC2D,ATG14,FOXP1,PWWP2A,NBPF15,MYNN,OTUD4,ZNF720,HEMK1,LINS1,HERC1,QKI,TMEM218,IFT20,ANKRD26,GSAP,SCAF11,DOCK8,PUS10,GPBP1,MRE11,GK5,NDUFAF7,DRAM2,RBM6,TRMT13,ZNF862,TTBK2,ZFAND6,IDUA,CCDC82,ARID4A,SBF2,LYRM7,SMAD4,VCPIP1,RYK,EPM2AIP1,CLIP4,PSME3IP1,WDR27,FBXO30,PER1,UBXN11,HECTD4,EME2,ZEB2,KHDC4,NCK1,CERS5,PNISR,AMT,CEPT1,USP45,CARD8,DMXL2,PIK3CA,SIGLEC10,ZNF10,SRSF7,EVI5,NCOA2,FAM126B,IFFO1,RNF149,HECTD2,BCL6,SESN1,ESCO1,CEP63,CEP120,KLF12,UBE2B,ANGEL2,POC5,ADPGK,MYSM1,FCHO2,ARID2,VPS13B,UIMC1,UVRAG,MALT1,TAF1D,KATNBL1,CEP95,CCDC174,LYSMD2,SPIN3,TBRG1,GABPA,CD79A,MEF2C,KLHDC1,GATAD1,CCNL2,BNIP2,CLK3,RNPC3,C14orf28,ANKRD10,INCA1,UBXN7,LRCH3,GABBR1,CNOT4,SON,DOP1A,BTBD19,N6AMT1,KIAA2026,MSL3,KMT2C,TCEAL1,CCDC50,FBXO22,DENND4A,MC1R,CCDC32,RLIM,KLF6,CCNT2,STAT4,PTCD3,SP100,EEA1,KAT2A,UBE2W,PHTF2,ZNF91,ACBD4,BRWD1,RBMS3,RBM26,CLDND1,NAPEPLD,PURB,MARCHF1,CCNH,RBM25,FBXW7,CEBPZOS,RO60,MLH3,SP4,SETD6,POLI,PTS,LNPEP,PRPF39,ITSN2,RESF1,ERMARD,COMMD10,WDFY3,ENTPD4,ZFAND1,SGSH,SMC5,ZNF106,EPC1,LCOR,PHF1,DDHD1,PABIR2,ZNF717,SBDS,SLC4A7,TMEM128,HEXIM2,CEP44,CENPC,RBM41,HSF4,SERPINB9,NOL9,ARGLU1,NEPRO,CCNL1,RUBCN,TLK1,ANKRA2,C2orf49,POLK,PLEKHA3,VMAC,CELF1,TMEM161B,EPG5,RBM45,PRDM2,YAE1,HLA-DOB,PMS1,FAM160A2,RNFT1,PPM1M,DCUN1D1,WDR36,AAK1,PBX4,TIA1,ZNF83,MOSMO,TMUB2,ATF3,PLCG2,KANSL1,NSUN6,SP110,RFX3,SYNJ1,BMPR2,PIM2,ERCC3,C3orf38,SZT2,DDX5,USP48,GRIPAP1,STX17,CYLD,GIN1,PARP8,HELZ,LIPT1,STK4,NDUFA5,ELF2,LYST,LUC7L,SPOPL,TMEM65,PTBP3,COA5,LUC7L2,GAPVD1,SACM1L,UBE2V1,ARHGAP5,BBS4,EIF1B,SNX13,POU6F1,TRA2A,NSMCE4A,IQSEC1,KMT2A,SLC10A7,REV1,PREX1,XPA,PHOSPHO2,PCBD2,NR2C1,GPR132,CRTC2,APBB3,YPEL5,NRIP2,FAM135A,RUFY2,JMY,TEPSIN,RBM33,PAG1,AVL9,ZDHHC21,AGAP6,RBM19,WRAP73,BET1,FPGT,GABPB2,CPEB2,TRIM66,RBM39,ODF2L,GPATCH8,TATDN3,TNPO1,SLC25A27,PGS1,MSL2,JAZF1,TMEM267,ZCCHC8,ERICH1,TBL1XR1,KAT7,WASHC4,ZXDC,IQCB1,NSRP1,TRIM39,FNDC3A,PIGL,RIC3,ARHGAP30,NEK3,KCTD6,CSAD,RABGAP1L,RINL,ATRX,FEZ2,TRANK1,ATAD3B,MAP3K2,RBM28,DCAF8,IKZF5,C2CD5,ABCA5,PHYKPL,SF3B1,POFUT2,NHLRC2,FRA10AC1,RUFY3,OGA,NUP42,RECQL5,PAN3,CEP350,MED28,FOXO1,NIPSNAP3B,PTCD2,KMT2E,CLASP2,SUPT7L,MORC3,MINDY2,RICTOR,TM2D3,ARL6,CENPT,CYTH1,PEX1,CHORDC1,S100PBP,RBM4,CALCOCO1,DNAJB9,DPP8,USP24,TOGARAM1,IMMP2L,FAM76B,POGZ,CXCR4,YAF2,TRIM23,AKAP10,RBMX,RBM4B,DTWD1,RNF217,CYTIP,EXOG,WDSUB1,MAP3K12,TEFM,ARRDC3,FUBP1,NF1,SLC38A6,PRIMPOL,THAP9,SCAPER,EZH1,MRNIP,THAP6,ELMOD3,DDX17,E2F5,GSTM2,MAP3K13,SENP7,RSBN1L,MTRF1,RAD52,CEP43,DYRK1A,ASXL2,CTDSPL2,CEP290,SDR39U1,TRPM7,PXK,GNG2,PGGHG,PNPLA8,WSB1,GPALPP1,CNBP,MKLN1,RHEB,PHIP,C12orf76,POLL,FAM228B,CBLN3,TIGD1,KLC1,GPS2,TRIM52,DUS4L,USF3,SPIN2B,CRYZL1,CLASRP,CCDC93,CWC25,TTC32,MTX3,TM2D1,ZMAT1,GOLGA8B,CSGALNACT2,HP1BP3,TSC22D3,SS18,ALPK1,TUT7,STRADA,VPS13C,ZFX,CREM,SGPP1,GOLGA8A,CYP2R1,PAM16,PPHLN1,MPEG1,FKTN,POC1B,SETD4,RBM48,PIKFYVE,AARSD1,SEPTIN7,RBM5,CPEB3,DHX36,NKTR,CEP162,YPEL3,ZFP28,ZCCHC7,TTLL3,CRBN,TUBE1,SLC25A45,ZNF84,PARP6,DPH6,NMRK1,SLAMF6,TRA2B,FRYL,C2CD2,PCMTD1,PIAS2,JMJD1C,TSC1,DENND4B,NSUN3,SPG11,NGLY1,MAN2C1,USPL1,USP20,WHAMM,LIN7C,TET2,TRAPPC2,KBTBD2,ATF2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | PIAS4,SH3GL1 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000231721 | ENST00000429901 | exon_skip_74009 | chr11:64773429-64773505 | -15.32 | -0.2321 | SF1 | ENST00000377390 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_370518 | chr22:50247691-50247776 | -15.12 | -0.2016 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_374551 | chr3:50100531-50100605 | -10.94 | -0.6837 | RBM5 | ENST00000347869 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_382458 | chr3:38131595-38131638 | -9.80 | -0.2579 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_509943 | chrX:47175018-47175092 | -12.47 | -0.2969 | RBM10 | ENST00000377604 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_41813 | chr10:68337857-68337996 | -18.29 | -0.1475 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_52712 | chr10:97476834-97476963 | -21.12 | -0.1974 | MMS19 | ENST00000370782,ENST00000438925 | In-frame | | ENSG00000231721 | ENST00000429901 | exon_skip_103007 | chr13:37025319-37025437 | -12.02 | -0.1045 | SUPT20H | ENST00000350612 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_290158 | chr17:42953723-42953778 | -17.02 | -0.4151 | AARSD1 | ENST00000427569 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_377198 | chr3:123130479-123130616 | -19.20 | -0.1500 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_378467 | chr3:143023974-143024018 | -7.31 | -0.7310 | U2SURP | ENST00000473835 | Frame-shift | | ENSG00000231721 | ENST00000429901 | exon_skip_52671 | chr10:97461495-97461622 | -17.95 | -0.1910 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name | | LncEditing_193204 | ENSG00000231721.5 | chr7 | 130944866 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193209 | ENSG00000231721.5 | chr7 | 130944867 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193214 | ENSG00000231721.5 | chr7 | 130945135 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193219 | ENSG00000231721.5 | chr7 | 130945233 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193224 | ENSG00000231721.5 | chr7 | 130945272 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193234 | ENSG00000231721.5 | chr7 | 130945280 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193239 | ENSG00000231721.5 | chr7 | 130945435 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193249 | ENSG00000231721.5 | chr7 | 130945478 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193519 | ENSG00000231721.5 | chr7 | 130957836 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193555 | ENSG00000231721.5 | chr7 | 130957858 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193567 | ENSG00000231721.5 | chr7 | 130957862 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_193723 | ENSG00000231721.5 | chr7 | 130957978 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_196001 | ENSG00000231721.5 | chr7 | 131041262 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_196372 | ENSG00000231721.5 | chr7 | 131044673 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_196714 | ENSG00000231721.5 | chr7 | 131055085 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_196720 | ENSG00000231721.5 | chr7 | 131055090 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_197684 | ENSG00000231721.5 | chr7 | 131091894 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 | | LncEditing_197874 | ENSG00000231721.5 | chr7 | 131100073 | - | antisense | LINC-PINT | ENST00000451786.4 | antisense | LINC-PINT-001 |
| Edited-associated DElncRNAs in cancer. |
 |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change | | ENSG00000231721 | LncEditing_193204 | SARC | chr7_130944866_- | 2.153221e+00 | 9.441365e-01 | 8.407395e-01 | 7.386656e+00 | 1.505676e-13 | 4.085253e-13 | UP | | ENSG00000231721 | LncEditing_193209 | SARC | chr7_130944867_- | 1.753710e+00 | 7.843926e-01 | 8.615027e-01 | 1.033770e+01 | 4.758173e-25 | 1.097354e-23 | UP | | ENSG00000231721 | LncEditing_193219 | SARC | chr7_130945233_- | 2.128109e+00 | 9.375479e-01 | 8.455890e-01 | 7.409476e+00 | 1.267998e-13 | 3.517980e-13 | UP | | ENSG00000231721 | LncEditing_193249 | SARC | chr7_130945478_- | 1.876111e+00 | 8.414612e-01 | 8.644710e-01 | 9.538642e+00 | 1.447151e-21 | 2.053841e-20 | UP | | ENSG00000231721 | LncEditing_193204 | KIRC | chr7_130944866_- | 2.545575e+00 | 2.081415e+00 | 3.443205e+00 | 8.975775e+00 | 2.813630e-19 | 6.393049e-19 | UP | | ENSG00000231721 | LncEditing_193209 | KIRC | chr7_130944867_- | 2.534761e+00 | 1.599851e+00 | 1.506225e+00 | 1.250918e+01 | 6.650591e-36 | 5.371075e-35 | UP | | ENSG00000231721 | LncEditing_193214 | KIRC | chr7_130945135_- | 3.337831e+00 | 2.095866e+00 | 1.489504e+00 | 8.313591e+00 | 9.284866e-17 | 1.905706e-16 | UP | | ENSG00000231721 | LncEditing_193219 | KIRC | chr7_130945233_- | 3.146828e+00 | 1.472054e+00 | 9.123529e-01 | 1.433502e+01 | 1.322178e-46 | 2.338996e-45 | UP | | ENSG00000231721 | LncEditing_193234 | KIRC | chr7_130945280_- | 3.162603e+00 | 2.093628e+00 | 1.680369e+00 | 8.823052e+00 | 1.113812e-18 | 2.485172e-18 | UP | | ENSG00000231721 | LncEditing_193209 | DLBC | chr7_130944867_- | 3.259003e+00 | 2.299502e+00 | 1.987638e+00 | 2.919963e+00 | 3.500727e-03 | 7.568239e-03 | UP | | ENSG00000231721 | LncEditing_193219 | DLBC | chr7_130945233_- | 3.498695e+00 | 2.539461e+00 | 2.163122e+00 | 2.546804e+00 | 1.087146e-02 | 1.571860e-02 | UP | | ENSG00000231721 | LncEditing_193249 | DLBC | chr7_130945478_- | 3.400892e+00 | 2.228710e+00 | 1.640139e+00 | 2.858304e+00 | 4.259120e-03 | 8.632323e-03 | UP | | ENSG00000231721 | LncEditing_193204 | GBM | chr7_130944866_- | 3.244029e+00 | 2.336068e+00 | 2.111022e+00 | 3.119658e+00 | 1.810611e-03 | 2.166841e-03 | UP | | ENSG00000231721 | LncEditing_193214 | GBM | chr7_130945135_- | 3.780269e+00 | 2.925798e+00 | 2.705199e+00 | 3.427229e+00 | 6.097744e-04 | 7.768622e-04 | UP | | ENSG00000231721 | LncEditing_193219 | GBM | chr7_130945233_- | 3.852016e+00 | 2.364554e+00 | 1.420363e+00 | 6.633656e+00 | 3.274733e-11 | 1.676746e-10 | UP | | ENSG00000231721 | LncEditing_193224 | GBM | chr7_130945272_- | 4.600042e+00 | 2.775127e+00 | 1.371566e+00 | 5.666076e+00 | 1.461048e-08 | 3.888118e-08 | UP | | ENSG00000231721 | LncEditing_193234 | GBM | chr7_130945280_- | 4.037021e+00 | 2.760151e+00 | 1.823008e+00 | 5.212977e+00 | 1.858335e-07 | 4.073321e-07 | UP | | ENSG00000231721 | LncEditing_193239 | GBM | chr7_130945435_- | 4.427555e+00 | 2.864796e+00 | 1.592160e+00 | 4.273087e+00 | 1.927852e-05 | 3.058103e-05 | UP | | ENSG00000231721 | LncEditing_193249 | GBM | chr7_130945478_- | 3.618068e+00 | 2.167918e+00 | 1.353346e+00 | 6.362588e+00 | 1.983827e-10 | 8.358938e-10 | UP | | ENSG00000231721 | LncEditing_193204 | MESO | chr7_130944866_- | 2.614138e+00 | 1.253619e+00 | 9.431863e-01 | 4.699806e+00 | 2.604085e-06 | 1.420825e-05 | UP | | ENSG00000231721 | LncEditing_193209 | MESO | chr7_130944867_- | 2.247371e+00 | 1.003923e+00 | 8.601486e-01 | 5.586647e+00 | 2.314956e-08 | 4.499696e-07 | UP | | ENSG00000231721 | LncEditing_193214 | MESO | chr7_130945135_- | 3.082147e+00 | 1.468471e+00 | 9.349106e-01 | 3.478113e+00 | 5.049567e-04 | 8.773270e-04 | UP | | ENSG00000231721 | LncEditing_193234 | MESO | chr7_130945280_- | 3.436756e+00 | 1.485510e+00 | 8.263854e-01 | 3.475713e+00 | 5.094972e-04 | 8.802980e-04 | UP | | ENSG00000231721 | LncEditing_193249 | MESO | chr7_130945478_- | 2.231542e+00 | 9.913661e-01 | 8.542983e-01 | 5.646177e+00 | 1.640553e-08 | 3.644372e-07 | UP | | ENSG00000231721 | LncEditing_193204 | BLCA | chr7_130944866_- | 2.150886e+00 | 1.004147e+00 | 9.099509e-01 | 9.388036e+00 | 6.112934e-21 | 2.754952e-20 | UP | | ENSG00000231721 | LncEditing_193204 | LGG | chr7_130944866_- | 3.585081e+00 | 2.880378e+00 | 3.167085e+00 | 5.109259e+00 | 3.234240e-07 | 4.114187e-07 | UP | | ENSG00000231721 | LncEditing_193214 | LGG | chr7_130945135_- | 4.705813e+00 | 3.167107e+00 | 1.750460e+00 | 7.435218e+00 | 1.043955e-13 | 1.924366e-13 | UP | | ENSG00000231721 | LncEditing_193219 | LGG | chr7_130945233_- | 4.065198e+00 | 2.971924e+00 | 2.212739e+00 | 7.543049e+00 | 4.591080e-14 | 8.713179e-14 | UP | | ENSG00000231721 | LncEditing_193249 | LGG | chr7_130945478_- | 3.787051e+00 | 2.631902e+00 | 1.904873e+00 | 9.731697e+00 | 2.208762e-22 | 7.875685e-22 | UP | | ENSG00000231721 | LncEditing_193204 | ACC | chr7_130944866_- | 2.952051e+00 | 1.815987e+00 | 1.426608e+00 | 3.209704e+00 | 1.328719e-03 | 2.267680e-03 | UP | | ENSG00000231721 | LncEditing_193209 | ACC | chr7_130944867_- | 2.553431e+00 | 1.722977e+00 | 1.762010e+00 | 3.566652e+00 | 3.615708e-04 | 8.048092e-04 | UP | | ENSG00000231721 | LncEditing_193214 | ACC | chr7_130945135_- | 3.567084e+00 | 1.842693e+00 | 1.049396e+00 | 3.136381e+00 | 1.710470e-03 | 2.736752e-03 | UP | | ENSG00000231721 | LncEditing_193219 | ACC | chr7_130945233_- | 3.375447e+00 | 1.525578e+00 | 8.728114e-01 | 5.371151e+00 | 7.823574e-08 | 1.335223e-06 | UP | | ENSG00000231721 | LncEditing_193204 | LUSC | chr7_130944866_- | 2.162866e+00 | 1.108741e+00 | 1.037322e+00 | 9.859603e+00 | 6.229533e-23 | 2.163590e-22 | UP | | ENSG00000231721 | LncEditing_193209 | LUSC | chr7_130944867_- | 1.886827e+00 | 8.582890e-01 | 8.799514e-01 | 1.358385e+01 | 4.993153e-42 | 1.612789e-40 | UP | | ENSG00000231721 | LncEditing_193219 | LUSC | chr7_130945233_- | 2.162931e+00 | 9.251069e-01 | 8.161295e-01 | 1.346617e+01 | 2.473580e-41 | 7.263330e-40 | UP | | ENSG00000231721 | LncEditing_193249 | LUSC | chr7_130945478_- | 1.887964e+00 | 8.455231e-01 | 8.628760e-01 | 1.315524e+01 | 1.587722e-39 | 3.418895e-38 | UP | | ENSG00000231721 | LncEditing_193219 | KICH | chr7_130945233_- | 3.697930e+00 | 2.506325e+00 | 1.782073e+00 | 4.184573e+00 | 2.857029e-05 | 1.116110e-04 | UP | | ENSG00000231721 | LncEditing_193249 | KICH | chr7_130945478_- | 3.436186e+00 | 1.672413e+00 | 9.625780e-01 | 4.659640e+00 | 3.167623e-06 | 2.101693e-05 | UP | | ENSG00000231721 | LncEditing_193204 | SKCM | chr7_130944866_- | 2.422371e+00 | 1.317111e+00 | 1.137601e+00 | 9.938229e+00 | 2.838295e-23 | 7.229619e-23 | UP | | ENSG00000231721 | LncEditing_193204 | LAML | chr7_130944866_- | 6.996326e+00 | 5.005656e+00 | 2.070228e+00 | 3.145889e+00 | 1.655829e-03 | 2.076091e-03 | UP | | ENSG00000231721 | LncEditing_193209 | LAML | chr7_130944867_- | 6.831459e+00 | 3.753930e+00 | 1.157686e+00 | 6.073675e+00 | 1.250156e-09 | 5.573798e-09 | UP | | ENSG00000231721 | LncEditing_193219 | LAML | chr7_130945233_- | 7.880735e+00 | 4.377762e+00 | 1.179055e+00 | 5.280185e+00 | 1.290538e-07 | 3.605914e-07 | UP | | ENSG00000231721 | LncEditing_193249 | LAML | chr7_130945478_- | 6.200288e+00 | 3.585468e+00 | 1.265544e+00 | 4.896745e+00 | 9.743710e-07 | 2.266193e-06 | UP | | ENSG00000231721 | LncEditing_196720 | LAML | chr7_131055090_- | 9.523567e+00 | 4.635013e+00 | 9.625300e-01 | 4.336559e+00 | 1.447305e-05 | 2.644115e-05 | UP | | ENSG00000231721 | LncEditing_197684 | LAML | chr7_131091894_- | 8.589780e+00 | 4.834902e+00 | 1.206077e+00 | 3.721189e+00 | 1.982867e-04 | 2.946861e-04 | UP | | ENSG00000231721 | LncEditing_197874 | LAML | chr7_131100073_- | 9.045363e+00 | 4.867483e+00 | 1.118565e+00 | 4.298647e+00 | 1.718438e-05 | 3.098206e-05 | UP | | ENSG00000231721 | LncEditing_193204 | PCPG | chr7_130944866_- | 2.877564e+00 | 1.644944e+00 | 1.239450e+00 | 5.606506e+00 | 2.064513e-08 | 6.431753e-08 | UP | | ENSG00000231721 | LncEditing_193209 | PCPG | chr7_130944867_- | 2.827671e+00 | 1.505811e+00 | 1.100020e+00 | 5.445265e+00 | 5.172819e-08 | 1.470170e-07 | UP | | ENSG00000231721 | LncEditing_193214 | PCPG | chr7_130945135_- | 4.027790e+00 | 2.114693e+00 | 1.075801e+00 | 7.411548e+00 | 1.248340e-13 | 1.479740e-12 | UP | | ENSG00000231721 | LncEditing_193219 | PCPG | chr7_130945233_- | 3.668641e+00 | 2.034906e+00 | 1.176078e+00 | 7.543264e+00 | 4.583526e-14 | 5.862089e-13 | UP | | ENSG00000231721 | LncEditing_193224 | PCPG | chr7_130945272_- | 5.053349e+00 | 2.291451e+00 | 8.764405e-01 | 5.335165e+00 | 9.545749e-08 | 2.577352e-07 | UP | | ENSG00000231721 | LncEditing_193234 | PCPG | chr7_130945280_- | 4.196253e+00 | 2.155878e+00 | 1.040771e+00 | 7.086911e+00 | 1.371380e-12 | 1.332982e-11 | UP | | ENSG00000231721 | LncEditing_193249 | PCPG | chr7_130945478_- | 3.257821e+00 | 2.004353e+00 | 1.427000e+00 | 6.201663e+00 | 5.586963e-10 | 2.662023e-09 | UP | | ENSG00000231721 | LncEditing_193204 | KIRP | chr7_130944866_- | 2.576238e+00 | 1.565937e+00 | 1.392293e+00 | 3.770797e+00 | 1.627269e-04 | 2.046622e-04 | UP | | ENSG00000231721 | LncEditing_193209 | KIRP | chr7_130944867_- | 2.252308e+00 | 1.338981e+00 | 1.332855e+00 | 7.572068e+00 | 3.673300e-14 | 1.298671e-13 | UP | | ENSG00000231721 | LncEditing_193219 | KIRP | chr7_130945233_- | 2.697174e+00 | 1.434968e+00 | 1.098381e+00 | 7.020808e+00 | 2.205895e-12 | 6.473509e-12 | UP | | ENSG00000231721 | LncEditing_193249 | KIRP | chr7_130945478_- | 2.360124e+00 | 1.174344e+00 | 9.930418e-01 | 1.016694e+01 | 2.785310e-24 | 7.356494e-23 | UP | | ENSG00000231721 | LncEditing_193209 | THCA | chr7_130944867_- | 2.856690e+00 | 2.343743e+00 | 3.502255e+00 | 5.418436e+00 | 6.012262e-08 | 9.591362e-08 | UP | | ENSG00000231721 | LncEditing_193219 | THCA | chr7_130945233_- | 3.044453e+00 | 2.265138e+00 | 2.344204e+00 | 7.977474e+00 | 1.493588e-15 | 3.985076e-15 | UP | | ENSG00000231721 | LncEditing_193234 | THCA | chr7_130945280_- | 3.284209e+00 | 2.702213e+00 | 3.553605e+00 | 4.937875e+00 | 7.897844e-07 | 1.191502e-06 | UP | | ENSG00000231721 | LncEditing_193249 | THCA | chr7_130945478_- | 2.952727e+00 | 2.003229e+00 | 1.786605e+00 | 7.804065e+00 | 5.994413e-15 | 1.494933e-14 | UP | | ENSG00000231721 | LncEditing_193204 | CHOL | chr7_130944866_- | 2.114050e+00 | 1.623434e+00 | 2.624941e+00 | 2.288964e+00 | 2.208144e-02 | 2.721038e-02 | UP | | ENSG00000231721 | LncEditing_193209 | CHOL | chr7_130944867_- | 2.282508e+00 | 1.125930e+00 | 9.808707e-01 | 4.026968e+00 | 5.650065e-05 | 1.165551e-03 | UP | | ENSG00000231721 | LncEditing_193219 | CHOL | chr7_130945233_- | 2.251017e+00 | 1.237580e+00 | 1.158674e+00 | 3.438259e+00 | 5.854685e-04 | 3.315462e-03 | UP | | ENSG00000231721 | LncEditing_193249 | CHOL | chr7_130945478_- | 2.518294e+00 | 1.226446e+00 | 9.634255e-01 | 4.170480e+00 | 3.039584e-05 | 1.094250e-03 | UP | | ENSG00000231721 | LncEditing_193204 | THYM | chr7_130944866_- | 2.325958e+00 | 1.301916e+00 | 1.194474e+00 | 4.726713e+00 | 2.281839e-06 | 5.752358e-06 | UP | | ENSG00000231721 | LncEditing_193209 | THYM | chr7_130944867_- | 2.165570e+00 | 1.029007e+00 | 9.315381e-01 | 7.270107e+00 | 3.592041e-13 | 8.464723e-12 | UP | | ENSG00000231721 | LncEditing_193219 | THYM | chr7_130945233_- | 2.571927e+00 | 1.089710e+00 | 8.071644e-01 | 7.599250e+00 | 2.978511e-14 | 1.025984e-12 | UP | | ENSG00000231721 | LncEditing_193249 | THYM | chr7_130945478_- | 2.141126e+00 | 1.031415e+00 | 9.489966e-01 | 6.918698e+00 | 4.558134e-12 | 7.969383e-11 | UP | | ENSG00000231721 | LncEditing_193204 | OV | chr7_130944866_- | 2.289417e+00 | 1.719910e+00 | 2.423378e+00 | 4.466393e+00 | 7.954959e-06 | 9.785398e-06 | UP | | ENSG00000231721 | LncEditing_193209 | OV | chr7_130944867_- | 2.164353e+00 | 1.227733e+00 | 1.222585e+00 | 6.957862e+00 | 3.454758e-12 | 7.277548e-12 | UP | | ENSG00000231721 | LncEditing_193214 | OV | chr7_130945135_- | 3.082124e+00 | 1.834062e+00 | 1.335323e+00 | 5.176383e+00 | 2.262284e-07 | 3.081733e-07 | UP | | ENSG00000231721 | LncEditing_193219 | OV | chr7_130945233_- | 2.705421e+00 | 1.340535e+00 | 9.871242e-01 | 1.036855e+01 | 3.447072e-25 | 2.566464e-24 | UP | | ENSG00000231721 | LncEditing_193224 | OV | chr7_130945272_- | 3.188505e+00 | 1.844480e+00 | 1.266358e+00 | 5.702104e+00 | 1.183375e-08 | 1.782331e-08 | UP | | ENSG00000231721 | LncEditing_193234 | OV | chr7_130945280_- | 2.865393e+00 | 1.808235e+00 | 1.505682e+00 | 6.560781e+00 | 5.352686e-11 | 9.993492e-11 | UP | | ENSG00000231721 | LncEditing_193249 | OV | chr7_130945478_- | 2.635457e+00 | 1.219205e+00 | 8.991893e-01 | 1.158971e+01 | 4.646798e-31 | 6.782113e-30 | UP | | ENSG00000231721 | LncEditing_196001 | OV | chr7_131041262_- | 3.492994e+00 | 1.801521e+00 | 1.046847e+00 | 5.288681e+00 | 1.232014e-07 | 1.712527e-07 | UP | | ENSG00000231721 | LncEditing_196720 | OV | chr7_131055090_- | 2.952266e+00 | 1.777061e+00 | 1.365506e+00 | 5.038411e+00 | 4.694131e-07 | 6.269068e-07 | UP | | ENSG00000231721 | LncEditing_193209 | READ | chr7_130944867_- | 2.215495e+00 | 1.040906e+00 | 9.176079e-01 | 6.635711e+00 | 3.229410e-11 | 2.221834e-10 | UP | | ENSG00000231721 | LncEditing_193249 | READ | chr7_130945478_- | 2.289786e+00 | 1.036004e+00 | 8.739865e-01 | 6.734579e+00 | 1.644051e-11 | 1.346556e-10 | UP | | ENSG00000231721 | LncEditing_193204 | LUAD | chr7_130944866_- | 3.629023e+00 | 2.653369e+00 | 2.213586e+00 | 9.904289e+00 | 3.987967e-23 | 1.613822e-22 | UP | | ENSG00000231721 | LncEditing_193214 | LUAD | chr7_130945135_- | 4.217657e+00 | 2.886510e+00 | 1.827767e+00 | 7.255494e+00 | 4.001972e-13 | 6.822260e-13 | UP | | ENSG00000231721 | LncEditing_193234 | LUAD | chr7_130945280_- | 5.050550e+00 | 2.634170e+00 | 1.064858e+00 | 9.000893e+00 | 2.238890e-19 | 6.214355e-19 | UP | | ENSG00000231721 | LncEditing_193204 | STAD | chr7_130944866_- | 1.509076e+00 | 1.104927e+00 | 2.223637e+00 | 6.462609e+00 | 1.029128e-10 | 1.711628e-10 | UP | | ENSG00000231721 | LncEditing_193209 | STAD | chr7_130944867_- | 1.429122e+00 | 8.639449e-01 | 1.377186e+00 | 8.566322e+00 | 1.068426e-17 | 3.533455e-17 | UP | | ENSG00000231721 | LncEditing_193219 | STAD | chr7_130945233_- | 1.591908e+00 | 1.094356e+00 | 1.849543e+00 | 7.778434e+00 | 7.342776e-15 | 1.749560e-14 | UP | | ENSG00000231721 | LncEditing_193234 | STAD | chr7_130945280_- | 1.691844e+00 | 1.189300e+00 | 1.966631e+00 | 4.682260e+00 | 2.837288e-06 | 3.490547e-06 | UP | | ENSG00000231721 | LncEditing_193249 | STAD | chr7_130945478_- | 1.828805e+00 | 1.042876e+00 | 1.234060e+00 | 9.923384e+00 | 3.293956e-23 | 2.335121e-22 | UP | | ENSG00000231721 | LncEditing_193555 | STAD | chr7_130957858_- | 1.494626e+00 | 1.181456e+00 | 2.947948e+00 | 3.787551e+00 | 1.521396e-04 | 1.706061e-04 | UP | | ENSG00000231721 | LncEditing_193567 | STAD | chr7_130957862_- | 1.609388e+00 | 1.176733e+00 | 2.213734e+00 | 3.466369e+00 | 5.275397e-04 | 5.753517e-04 | UP | | ENSG00000231721 | LncEditing_196714 | STAD | chr7_131055085_- | 1.635226e+00 | 1.157890e+00 | 2.008066e+00 | 4.246244e+00 | 2.173837e-05 | 2.557875e-05 | UP | | ENSG00000231721 | LncEditing_196720 | STAD | chr7_131055090_- | 1.465252e+00 | 1.027779e+00 | 1.954577e+00 | 6.500115e+00 | 8.025863e-11 | 1.344215e-10 | UP | | ENSG00000231721 | LncEditing_193204 | PRAD | chr7_130944866_- | 2.671100e+00 | 1.945616e+00 | 2.187193e+00 | 5.965256e+00 | 2.442512e-09 | 4.258185e-09 | UP | | ENSG00000231721 | LncEditing_193209 | PRAD | chr7_130944867_- | 2.452546e+00 | 1.552964e+00 | 1.516862e+00 | 1.136752e+01 | 6.069054e-30 | 4.981682e-29 | UP | | ENSG00000231721 | LncEditing_193219 | PRAD | chr7_130945233_- | 2.791498e+00 | 1.645206e+00 | 1.311009e+00 | 1.169829e+01 | 1.300410e-31 | 1.200848e-30 | UP | | ENSG00000231721 | LncEditing_193249 | PRAD | chr7_130945478_- | 2.448209e+00 | 1.494586e+00 | 1.404532e+00 | 1.001927e+01 | 1.254310e-23 | 6.229388e-23 | UP | | ENSG00000231721 | LncEditing_193204 | BRCA | chr7_130944866_- | 1.690966e+00 | 9.166643e-01 | 1.132013e+00 | 1.499908e+01 | 7.443890e-51 | 3.260065e-50 | UP | | ENSG00000231721 | LncEditing_193209 | BRCA | chr7_130944867_- | 1.629707e+00 | 6.894101e-01 | 8.056858e-01 | 2.046699e+01 | 4.240168e-93 | 1.541301e-91 | UP | | ENSG00000231721 | LncEditing_193219 | BRCA | chr7_130945233_- | 1.898575e+00 | 8.664114e-01 | 8.835539e-01 | 1.697900e+01 | 1.174642e-64 | 9.704142e-64 | UP | | ENSG00000231721 | LncEditing_193249 | BRCA | chr7_130945478_- | 1.845939e+00 | 7.979325e-01 | 8.264353e-01 | 1.781462e+01 | 5.442554e-71 | 6.087287e-70 | UP | | ENSG00000231721 | LncEditing_193204 | PAAD | chr7_130944866_- | 2.345072e+00 | 1.408784e+00 | 1.360208e+00 | 5.773747e+00 | 7.752798e-09 | 2.604940e-08 | UP | | ENSG00000231721 | LncEditing_193209 | PAAD | chr7_130944867_- | 2.113144e+00 | 1.096692e+00 | 1.056822e+00 | 7.972947e+00 | 1.549342e-15 | 3.718421e-14 | UP | | ENSG00000231721 | LncEditing_193214 | PAAD | chr7_130945135_- | 3.066024e+00 | 1.529179e+00 | 9.964017e-01 | 4.976556e+00 | 6.472570e-07 | 1.359240e-06 | UP | | ENSG00000231721 | LncEditing_193219 | PAAD | chr7_130945233_- | 2.372517e+00 | 1.295632e+00 | 1.145787e+00 | 7.688816e+00 | 1.485033e-14 | 2.772061e-13 | UP | | ENSG00000231721 | LncEditing_193249 | PAAD | chr7_130945478_- | 2.190592e+00 | 1.167166e+00 | 1.100945e+00 | 8.001824e+00 | 1.225892e-15 | 3.460765e-14 | UP | | ENSG00000231721 | LncEditing_193204 | ESCA | chr7_130944866_- | 1.566241e+00 | 1.037721e+00 | 1.683818e+00 | 4.208625e+00 | 2.569299e-05 | 3.436662e-05 | UP | | ENSG00000231721 | LncEditing_193214 | ESCA | chr7_130945135_- | 1.562510e+00 | 1.177283e+00 | 2.448551e+00 | 2.978788e+00 | 2.893905e-03 | 3.194115e-03 | UP | | ENSG00000231721 | LncEditing_193219 | ESCA | chr7_130945233_- | 1.618423e+00 | 7.475212e-01 | 8.973419e-01 | 8.251578e+00 | 1.563170e-16 | 1.668829e-15 | UP | | ENSG00000231721 | LncEditing_193234 | ESCA | chr7_130945280_- | 1.862575e+00 | 1.024669e+00 | 1.159904e+00 | 5.221698e+00 | 1.772902e-07 | 3.167947e-07 | UP | | ENSG00000231721 | LncEditing_193249 | ESCA | chr7_130945478_- | 1.701763e+00 | 7.359280e-01 | 8.268604e-01 | 8.842695e+00 | 9.343666e-19 | 1.632027e-17 | UP | | ENSG00000231721 | LncEditing_193519 | ESCA | chr7_130957836_- | 1.722452e+00 | 1.152258e+00 | 1.724141e+00 | 2.607215e+00 | 9.128212e-03 | 9.648377e-03 | UP | | ENSG00000231721 | LncEditing_193555 | ESCA | chr7_130957858_- | 1.705768e+00 | 1.088013e+00 | 1.541481e+00 | 3.465052e+00 | 5.301283e-04 | 6.200608e-04 | UP | | ENSG00000231721 | LncEditing_193567 | ESCA | chr7_130957862_- | 1.636384e+00 | 1.126591e+00 | 1.856847e+00 | 3.127554e+00 | 1.762675e-03 | 1.973593e-03 | UP | | ENSG00000231721 | LncEditing_193723 | ESCA | chr7_130957978_- | 1.788478e+00 | 1.121441e+00 | 1.485050e+00 | 4.349876e+00 | 1.362144e-05 | 1.885769e-05 | UP | | ENSG00000231721 | LncEditing_196372 | ESCA | chr7_131044673_- | 1.592017e+00 | 1.192321e+00 | 2.397604e+00 | 2.824589e+00 | 4.734137e-03 | 5.122742e-03 | UP | | ENSG00000231721 | LncEditing_196714 | ESCA | chr7_131055085_- | 1.635576e+00 | 1.118674e+00 | 1.824784e+00 | 3.022203e+00 | 2.509424e-03 | 2.781467e-03 | UP | | ENSG00000231721 | LncEditing_196720 | ESCA | chr7_131055090_- | 1.532250e+00 | 9.262499e-01 | 1.377072e+00 | 4.753063e+00 | 2.003579e-06 | 3.122306e-06 | UP |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value | | ENSG00000231721 | LncEditing_193234 | -5.273588e-01 | 3.228096e-06 | 9.592056e-06 | | ENSG00000231721 | LncEditing_193219 | -6.003435e-01 | 4.527294e-04 | 1.027340e-02 | | ENSG00000231721 | LncEditing_193219 | 4.038388e-01 | 4.786766e-04 | 2.414847e-03 | | ENSG00000231721 | LncEditing_193204 | -3.631771e-01 | 2.725167e-03 | 1.635100e-02 | | ENSG00000231721 | LncEditing_193234 | -3.483275e-01 | 2.049728e-02 | 2.254062e-02 | | ENSG00000231721 | LncEditing_193204 | -4.072562e-01 | 1.124291e-03 | 6.374493e-03 | | ENSG00000231721 | LncEditing_193214 | -6.032283e-01 | 1.412472e-03 | 6.760988e-03 | | ENSG00000231721 | LncEditing_193234 | -3.239472e-01 | 3.880845e-02 | 4.268115e-02 | | ENSG00000231721 | LncEditing_196714 | -3.890918e-01 | 1.730493e-02 | 2.672895e-02 | | ENSG00000231721 | LncEditing_193214 | -6.971056e-01 | 8.090541e-03 | 1.941730e-02 | | ENSG00000231721 | LncEditing_193214 | -5.071442e-01 | 1.599561e-02 | 2.253926e-02 | | ENSG00000231721 | LncEditing_193204 | -3.139919e-01 | 2.303651e-03 | 2.915240e-03 | | ENSG00000231721 | LncEditing_193249 | 3.137342e-01 | 1.656409e-03 | 9.063370e-03 | | ENSG00000231721 | LncEditing_193204 | -4.944972e-01 | 5.473746e-03 | 8.484307e-03 | | ENSG00000231721 | LncEditing_193219 | -4.175105e-01 | 1.683240e-03 | 3.485335e-03 | | ENSG00000231721 | LncEditing_193209 | 4.451227e-01 | 1.761673e-02 | 4.535387e-02 |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000231721 | ENSG00000047634 | SCML1 | ACC,COAD,ESCA,KIRC,KIRP,PAAD,SKCM,THCA | COAD | | | ENSG00000231721 | ENSG00000103037 | SETD6 | ACC,COAD,DLBC,KIRC,KIRP,THCA | COAD | | | ENSG00000231721 | ENSG00000152520 | PAN3 | ACC,BLCA,BRCA,CHOL,COAD,KIRC,KIRP,PAAD,THCA | COAD | | | ENSG00000231721 | ENSG00000170632 | ARMC10 | ACC,COAD,GBM,KICH,READ | COAD | | | ENSG00000231721 | ENSG00000204271 | SPIN3 | ACC,BRCA,CHOL,COAD,KICH,KIRC,KIRP,PAAD,READ,SKCM,THCA,THYM | COAD | | | ENSG00000231721 | ENSG00000102595 | UGGT2 | BLCA,BRCA,COAD,KIRC,KIRP,THYM | COAD | | | ENSG00000231721 | ENSG00000111300 | NAA25 | BLCA,BRCA,CHOL,COAD,KIRC,THYM | COAD | | | ENSG00000231721 | ENSG00000125772 | GPCPD1 | BLCA,BRCA,CHOL,COAD,DLBC,KICH,KIRC,KIRP,PAAD,THYM | COAD | | | ENSG00000231721 | ENSG00000132953 | XPO4 | BLCA,BRCA,CHOL,COAD,KIRC,THYM | COAD | | | ENSG00000231721 | ENSG00000166012 | TAF1D | BLCA,BRCA,CHOL,COAD,ESCA,KIRP,PAAD,SKCM | COAD | | | ENSG00000231721 | ENSG00000184445 | KNTC1 | BLCA,CHOL,COAD,KIRC,PAAD | COAD | | | ENSG00000231721 | ENSG00000184465 | WDR27 | BLCA,BRCA,CHOL,COAD,DLBC,KIRC,KIRP,PAAD,THCA | COAD | | | ENSG00000231721 | ENSG00000070882 | OSBPL3 | BRCA,COAD,DLBC,KICH,KIRC,KIRP,THYM | COAD | | | ENSG00000231721 | ENSG00000105865 | DUS4L | BRCA,CHOL,COAD,GBM,KIRC,KIRP,SKCM | COAD | | | ENSG00000231721 | ENSG00000175265 | GOLGA8A | BRCA,CHOL,COAD,KIRP,PAAD,THCA | COAD | | | ENSG00000231721 | ENSG00000215252 | GOLGA8B | BRCA,CHOL,COAD,DLBC,KIRP,PAAD,SKCM,THCA | COAD | | | ENSG00000231721 | ENSG00000222009 | BTBD19 | BRCA,COAD,DLBC,ESCA,KIRP,STAD,THCA,THYM | COAD | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000231721.5 | ENST00000423414.4 | 86 | 534 | 794 | | ENSG00000231721.5 | ENST00000433079.4 | 72 | 468 | 250 | | ENSG00000231721.5 | ENST00000451786.4 | 138 | 116 | 532 | | ENSG00000231721.5 | ENST00000443623.4 | 121 | 141 | 506 | | ENSG00000231721.5 | ENST00000435523.4 | 78 | 233 | 0 | | ENSG00000231721.5 | ENST00000431189.1 | 72 | 453 | 235 | | ENSG00000231721.5 | ENST00000416999.1 | 68 | 747 | 541 | | ENSG00000231721.5 | ENST00000429901.1 | 52 | 364 | 206 |
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