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lncRNA: ENSG00000231327 |
Summary for LINC01816 |
Gene summary |
Gene information | Ensembl ID | ENSG00000231327 | Gene symbol | LINC01816 |
Gene name | long intergenic non-protein coding RNA 1816 | |
HGNC | 52621 | |
Entrez ID | 100133985 | |
Gene type | lincRNA | |
Synonyms | LINC01816|02p13.3|AC016700.5 | |
UniProtAcc |
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Structure and expression level for LINC01816 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000231327 | 5.109003e+01 | 1.603855e+00 | 1.962883e-01 | 8.170919e+00 | 3.060000e-16 | 1.610000e-15 | UP | LUSC |
ENSG00000231327 | 3.512798e+01 | 1.435713e+00 | 1.796721e-01 | 7.990738e+00 | 1.340000e-15 | 9.890000e-15 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000231327 | -4.986214e-01 | 6.596073e-07 | KICH | 1.940305e-06 |
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lncRNA-Protein interaction for LINC01816 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000231327 | ENST00000414141 | AC016700.5 | ENSG00000277258 | PCGF2 | 23.62 | 91.5674 | P35227 | TF,Epi | NA |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000231327 | ENST00000414141 | AC016700.5 | ENSG00000180035 | ZNF48 | 15.34 | 93.0427 | Q96MX3 | TF | NA |
ENSG00000231327 | ENST00000414141 | AC016700.5 | ENSG00000177732 | SOX12 | 13.56 | 90.4728 | O15370 | TF | Predict |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000231327 | ENST00000414141 | AC016700.5 | ENSG00000150316 | CWC15 | 17.78 | 92.7429 | Q9P013 | RBP | NA |
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