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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000228288

Summary for PCAT6

check button Gene summary

Gene informationEnsembl ID

ENSG00000228288

Gene symbol

PCAT6

Gene nameprostate cancer associated transcript 6
HGNC

43714

Entrez ID

100506696

Gene typeantisense
Synonyms01q32.1|PCAT6
UniProtAcc

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Structure and expression level for PCAT6

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002282888.624668e+011.463033e+003.508751e-014.169669e+003.050000e-051.494470e-04UPCHOL
ENSG000002282883.465993e+021.847210e+002.659116e-016.946704e+003.740000e-121.040000e-10UPBLCA
ENSG000002282882.405855e+021.420033e+001.689103e-018.407022e+004.210000e-177.480000e-16UPKIRP
ENSG000002282882.437972e+021.913609e+001.770644e-011.080742e+013.170000e-278.750000e-26UPUCEC
ENSG000002282883.285136e+023.115444e+001.494014e-012.085284e+011.440000e-961.460000e-94UPLUSC
ENSG000002282883.577333e+021.670754e+001.102158e-011.515894e+016.610000e-521.500000e-50UPBRCA
ENSG000002282882.047632e+022.708702e+001.542256e-011.756324e+014.710000e-696.150000e-67UPLUAD
ENSG000002282886.814224e+011.069930e+001.528453e-017.000081e+002.560000e-121.790000e-11UPCOAD
ENSG000002282887.780545e+011.610852e+001.838199e-018.763213e+001.900000e-183.090000e-17UPLIHC
ENSG000002282888.977698e+011.566242e+002.753963e-015.687231e+001.290000e-082.590000e-07UPREAD

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002282885.730312e-013.889722e-05CHOL1.565194e-04
ENSG000002282883.037563e-012.644740e-12COAD2.176243e-10
ENSG000002282883.566615e-011.921361e-13LIHC1.501909e-12
ENSG000002282883.000745e-011.169459e-13LUAD1.210136e-12
ENSG000002282883.653898e-017.592093e-19PRAD1.433738e-17
ENSG000002282883.363021e-015.486430e-17UCEC1.000571e-15

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lncRNA-Protein interaction for PCAT6

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

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lncRNA-DNA interaction for PCAT6

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for PCAT6

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
PREPL,IDH3A,METTL14,FNIP1,SCAPER,APOL3,AP5M1,ACSL4,TBC1D5,RDX,PPP1R12A,TRIM14,VTI1B,KIAA1109,MEF2C,ITPR2,C11orf58,FCHO2,SMG1,MAT2B,PSMC1,ZFYVE26,SACM1L,MAN1A2,TMTC1,CELF2,ATP11B,SYNE2,MIER1,WWP1,CEP120,CPEB4,STRN,SLFN5,EPS8,JADE2,SP100,TMEM33,GIMAP6,KIDINS220,CYLD,SELENOP,IVD,ACOX1,RAP1A,CLASP2,FBXO11,ATG5,APPBP2,ETFDH,GIT2,MKLN1,ITSN2,RNF38,G3BP2,KLF13,MYCBP2,POC1B,FOXN3,ATP5F1B,ADGRE5,OSBPL8,NCOA4,MTRR,AZI2,VAMP7,TRAPPC13,TBC1D9,FASTKD2,HBP1,EIF4G2,SPATA13,PRKAR1A,SLC25A40,PPP1CC,TEP1,TLR1,RB1,GOLM2,ZZEF1,FAM13B,ATP6V0A2,ATF1,FYCO1,HMGCR,CUL3,ASB8,WDR11,UHRF1BP1L,NAF1,CYP4V2,DUSP3,RELL1,MBNL1,RCHY1,SLAIN2,ACSL1,GTF2H1,TASOR,FNDC3A,SEC24B,FOXN2,RABL3,ZFP1,ACAP2,TRAPPC8,MON2,USP33,N4BP2L1,TP53BP1,G3BP1,VPS13D,FERMT2,TRMO,TWF1,UBE3C,C9orf64,DDX3X,IPO5,ASXL2,FRYL,PIKFYVE,TLR4,ASH1L,SFXN1,SLC35A5,MAP3K3,GNPTAB,DNAJC13,MED13,WDR7,KDSR,TMEM131,GNE,ADH5,ADNP2,KIAA0232,NUP98,GLE1,DDX60,TRIM23,TRIP12,ME2,CHD9,PLCL2,MPHOSPH8,MORC3,CSNK1A1,ZEB1,GOSR1,CFLAR,ELF1,MOSPD2,VRK2,GCC2,CAST,DOCK10,TMBIM6,CTDSP2,SDAD1,SCAF11,CNOT1,ARL6IP5,MBP,LPIN2,SLC11A2,FCF1,DNAJC16,SECISBP2L,SEPTIN10,CHD8,TAOK3,RAB3GAP1,KAT5,UBE4A,ERBIN,EDNRB,AGGF1,IPO11,KATNAL1,FKTN,MACF1,NBR1,LIMA1,NUMB,KTN1,C5orf24,FBXO38,ILK,SDHD,CCPG1,SNRK,UBE2D3,IREB2,NEK9,CLIP1,RAD50,API5,IQGAP2,NCOA2,PTPRB,UBE3B,RC3H2,ISCA1,MAPK1,TLR3,MIER3,MTO1,TNS1,WNK1,RAB27A,CHURC1,TMLHE,KLHL5,EPS15,PPARA,GFM2,MGAT4A,GALC,KIF2A,OGDH,REST,SOS2,SLC30A5,PCYT1A,POLK,ELK3,PLEKHF2,IL6ST,BLOC1S6,ABCE1,PICALM,FAM114A2,SNX18,ITFG1,IPO7,HDHD2,SPG11,FAM172A,GLYR1,IBTK,VPS26C,QKI,HIPK1,TACC1,NRBF2,APC,CLOCK,PTPN11,MANEA,CLTC,RNF14,AP1AR,ATRN,CREBRF,KRIT1,ATP2A2,PTPRG,HSPA8,M6PR,SNX29,APAF1,BBX,PCNX1,CDC42SE2,LYRM7,SMARCA2,SLMAP,CLCN3,TM6SF1,CIPC,STARD8,MAN2A1,FBXW11,UFSP2,STK24,NCKAP1L,ARHGAP5,CLCC1,HELQ,MPDZ,MFSD14A,HADHB,FAN1,ARFGEF2,ARID4A,ZFYVE1,PCM1,KIF13B,VEZT,ZNF106,CERT1,SWAP70,MED13L,WIPF1,OPA1,COG6,SIK3,SYNJ1,PIGN,SBF2,TNPO1,HNMT,SPTLC1,BIRC6,ACADM,PPM1A,ANO6,ARL2BP,TMEM184C,RAD17,BDP1,SYNRG,TCP11L2,SLC30A7,EIF2AK4,CALCOCO2,ACAT1,ABHD18,AHNAK,NDUFS1,NSD1,ACTR6
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000228288ENST00000425295exon_skip_98463chr12:124374412-124374463-12.01-0.2929NCOR2ENST00000405201In-frame
ENSG00000228288ENST00000425295exon_skip_48716chr10:34372497-34372536-8.77-0.3373PARD3ENST00000374789In-frame
ENSG00000228288ENST00000425295exon_skip_95500chr12:96003837-96003920-8.91-0.1485LTA4HENST00000228740Frame-shift
ENSG00000228288ENST00000425295exon_skip_324294chr2:27774423-27774530-13.17-0.1401MRPL33ENST00000296102Frame-shift
ENSG00000228288ENST00000425295exon_skip_462160chr6:127316449-127316502-7.71-0.3505ECHDC1ENST00000531967Frame-shift
ENSG00000228288ENST00000425295exon_skip_466113chr7:48099669-48099787-12.11-0.1176UPP1ENST00000331803,ENST00000395564Frame-shift
ENSG00000228288ENST00000425295exon_skip_153096chr17:44074968-44075087-16.61-0.1420G6PC3ENST00000269097Frame-shift
ENSG00000228288ENST00000425295exon_skip_5818chr1:45568484-45568684-20.08-0.1240AKR1A1ENST00000351829,ENST00000372070Frame-shift
ENSG00000228288ENST00000425295exon_skip_11029chr1:154989559-154989707-21.25-0.1486FLAD1ENST00000292180Frame-shift
ENSG00000228288ENST00000425295exon_skip_446758chr5:178212972-178213103-14.72-0.1457PHYKPLENST00000308158Frame-shift
ENSG00000228288ENST00000425295exon_skip_153767chr17:48057031-48057121-14.71-0.1672NFE2L1ENST00000362042In-frame

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for PCAT6

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000228288ENST00000553157FAM13BENSG00000031003ENST00000425075-0.1656127-BLCA,LUSC,READ
ENSG00000228288ENST00000553157FAM13BENSG00000031003ENST00000420893-0.1028324-BLCA,LUSC,READ
ENSG00000228288ENST00000553157CFLARENSG00000003402ENST00000443227-0.1217175-LUSC
ENSG00000228288ENST00000553157CFLARENSG00000003402ENST00000341582-0.100123-LUSC
ENSG00000228288ENST00000553157CFLARENSG00000003402ENST00000395148-0.11061-LUSC
ENSG00000228288ENST00000553157CFLARENSG00000003402ENST00000423241-0.14331-LUSC
ENSG00000228288ENST00000553157CFLARENSG00000003402ENST00000479953-0.110342-LUSC
ENSG00000228288ENST00000553157RAB27AENSG00000069974ENST00000564609-0.1059340-CHOL,BLCA,LUSC,COAD,READ
ENSG00000228288ENST00000553157RAB27AENSG00000069974ENST00000569493-0.1059340-CHOL,BLCA,LUSC,COAD,READ
ENSG00000228288ENST00000553157KATNAL1ENSG00000102781ENST00000380617-0.1768245-BLCA,UCEC
ENSG00000228288ENST00000553157ZNF106ENSG00000103994ENST00000569648-0.176426-BLCA,LUSC,BRCA,LUAD
ENSG00000228288ENST00000417262FAM13BENSG00000031003ENST00000425075-0.1656119-BLCA,LUSC,READ
ENSG00000228288ENST00000417262CFLARENSG00000003402ENST00000443227-0.1217167-LUSC
ENSG00000228288ENST00000417262CFLARENSG00000003402ENST00000341582-0.100115-LUSC
ENSG00000228288ENST00000417262CFLARENSG00000003402ENST00000423241-0.165415-LUSC
ENSG00000228288ENST00000417262CFLARENSG00000003402ENST00000479953-0.1455487-LUSC
ENSG00000228288ENST00000417262RAB27AENSG00000069974ENST00000569493-0.1002130-CHOL,BLCA,LUSC,COAD,READ
ENSG00000228288ENST00000417262KATNAL1ENSG00000102781ENST00000380617-0.1768237-BLCA,UCEC
ENSG00000228288ENST00000417262ZNF106ENSG00000103994ENST00000569648-0.176418-BLCA,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295FAM13BENSG00000031003ENST00000425075-0.1656119-BLCA,LUSC,READ
ENSG00000228288ENST00000425295CFLARENSG00000003402ENST00000443227-0.1217167-LUSC
ENSG00000228288ENST00000425295CFLARENSG00000003402ENST00000341582-0.100115-LUSC
ENSG00000228288ENST00000425295CFLARENSG00000003402ENST00000395148-0.10741-LUSC
ENSG00000228288ENST00000425295CFLARENSG00000003402ENST00000423241-0.1628344-LUSC
ENSG00000228288ENST00000425295CFLARENSG00000003402ENST00000479953-0.110334-LUSC
ENSG00000228288ENST00000425295RAB27AENSG00000069974ENST00000569493-0.1002130-CHOL,BLCA,LUSC,COAD,READ
ENSG00000228288ENST00000425295KATNAL1ENSG00000102781ENST00000380617-0.1768237-BLCA,UCEC
ENSG00000228288ENST00000425295ZNF106ENSG00000103994ENST00000569648-0.176418-BLCA,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157HNMTENSG00000150540ENST00000280096-0.11591-CHOL,UCEC,LUSC
ENSG00000228288ENST00000553157EPS8ENSG00000151491ENST00000540613-0.1310196-UCEC,BRCA
ENSG00000228288ENST00000553157EPS8ENSG00000151491ENST00000542903-0.1536184-UCEC,BRCA
ENSG00000228288ENST00000553157MIER3ENSG00000155545ENST00000451637-0.12491-COAD,READ
ENSG00000228288ENST00000553157FCHO2ENSG00000157107ENST00000512348-0.11631-LUSC,READ
ENSG00000228288ENST00000553157FCHO2ENSG00000157107ENST00000287761-0.22181-LUSC,READ
ENSG00000228288ENST00000553157MORC3ENSG00000159256ENST00000549948-0.13831-UCEC
ENSG00000228288ENST00000553157MORC3ENSG00000159256ENST00000552581-0.11511-UCEC
ENSG00000228288ENST00000553157SNRKENSG00000163788ENST00000437827-0.1202336-CHOL,BLCA,UCEC,LUSC,LUAD,READ
ENSG00000228288ENST00000553157TLR3ENSG00000164342ENST00000504367-0.3086438-LUSC,BRCA,COAD,LIHC,READ
ENSG00000228288ENST00000553157TCP11L2ENSG00000166046ENST00000549906-0.15701-LUSC,BRCA
ENSG00000228288ENST00000417262HNMTENSG00000150540ENST00000280096-0.11381-CHOL,UCEC,LUSC
ENSG00000228288ENST00000417262EPS8ENSG00000151491ENST00000540613-0.1310188-UCEC,BRCA
ENSG00000228288ENST00000417262EPS8ENSG00000151491ENST00000542903-0.7771583-UCEC,BRCA
ENSG00000228288ENST00000417262MIER3ENSG00000155545ENST00000451637-0.12491-COAD,READ
ENSG00000228288ENST00000417262FCHO2ENSG00000157107ENST00000512348-0.11631-LUSC,READ
ENSG00000228288ENST00000417262FCHO2ENSG00000157107ENST00000287761-0.22181-LUSC,READ
ENSG00000228288ENST00000417262MORC3ENSG00000159256ENST00000549948-0.13831-UCEC
ENSG00000228288ENST00000417262MORC3ENSG00000159256ENST00000551788-0.11341-UCEC
ENSG00000228288ENST00000417262MORC3ENSG00000159256ENST00000552581-0.11511-UCEC
ENSG00000228288ENST00000417262TLR3ENSG00000164342ENST00000504367-0.1483730-LUSC,BRCA,COAD,LIHC,READ
ENSG00000228288ENST00000417262CREBRFENSG00000164463ENST00000520420-0.1035410-BLCA,UCEC,LUSC,READ
ENSG00000228288ENST00000417262TCP11L2ENSG00000166046ENST00000549906-0.15701-LUSC,BRCA
ENSG00000228288ENST00000425295HNMTENSG00000150540ENST00000280096-0.11381-CHOL,UCEC,LUSC
ENSG00000228288ENST00000425295EPS8ENSG00000151491ENST00000540613-0.1310188-UCEC,BRCA
ENSG00000228288ENST00000425295EPS8ENSG00000151491ENST00000542903-0.7771469-UCEC,BRCA
ENSG00000228288ENST00000425295MIER3ENSG00000155545ENST00000451637-0.12491-COAD,READ
ENSG00000228288ENST00000425295FCHO2ENSG00000157107ENST00000512348-0.11631-LUSC,READ
ENSG00000228288ENST00000425295FCHO2ENSG00000157107ENST00000287761-0.22181-LUSC,READ
ENSG00000228288ENST00000425295MORC3ENSG00000159256ENST00000549948-0.13831-UCEC
ENSG00000228288ENST00000425295MORC3ENSG00000159256ENST00000551788-0.11341-UCEC
ENSG00000228288ENST00000425295MORC3ENSG00000159256ENST00000552581-0.11511-UCEC
ENSG00000228288ENST00000425295TLR3ENSG00000164342ENST00000504367-0.1483616-LUSC,BRCA,COAD,LIHC,READ
ENSG00000228288ENST00000425295TCP11L2ENSG00000166046ENST00000549906-0.15701-LUSC,BRCA
ENSG00000228288ENST00000553157CEP120ENSG00000168944ENST00000515110-0.6614310-UCEC
ENSG00000228288ENST00000553157FEM1BENSG00000169018ENST00000566008-0.129099-UCEC
ENSG00000228288ENST00000553157ANO6ENSG00000177119ENST00000550630-0.10371-UCEC,LUSC,BRCA
ENSG00000228288ENST00000553157SEPTIN10ENSG00000186522ENST00000437928-0.126787-BLCA,UCEC
ENSG00000228288ENST00000553157SEPTIN10ENSG00000186522ENST00000415095-0.10471-BLCA,UCEC
ENSG00000228288ENST00000553157SEPTIN10ENSG00000186522ENST00000425498-0.10401-BLCA,UCEC
ENSG00000228288ENST00000553157LYRM7ENSG00000186687ENST00000507584-0.1030408-KIRP
ENSG00000228288ENST00000553157SACM1LENSG00000211456ENST00000418611-0.17918-CHOL,LUSC
ENSG00000228288ENST00000553157NCOA4ENSG00000266412ENST00000583565-0.10591-CHOL,COAD,READ
ENSG00000228288ENST00000553157NCOA4ENSG00000266412ENST00000580070-0.10591-CHOL,COAD,READ
ENSG00000228288ENST00000553157NCOA4ENSG00000266412ENST00000578454-0.10431-CHOL,COAD,READ
ENSG00000228288ENST00000553157NCOA4ENSG00000266412ENST00000579039-0.105913-CHOL,COAD,READ
ENSG00000228288ENST00000553157APOL3ENSG00000128284ENST00000424878-0.13733-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157APOL3ENSG00000128284ENST00000472303-0.102828-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157APOL3ENSG00000128284ENST00000531095-0.24651-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157IL6STENSG00000134352ENST00000502326-3.3500509-CHOL,BLCA,UCEC,LUSC,COAD,LIHC,READ
ENSG00000228288ENST00000417262CEP120ENSG00000168944ENST00000515110-0.6614302-UCEC
ENSG00000228288ENST00000417262FEM1BENSG00000169018ENST00000566008-0.129091-UCEC
ENSG00000228288ENST00000417262ANO6ENSG00000177119ENST00000425752-0.12501-UCEC,LUSC,BRCA
ENSG00000228288ENST00000417262SEPTIN10ENSG00000186522ENST00000415095-0.10471-BLCA,UCEC
ENSG00000228288ENST00000417262SEPTIN10ENSG00000186522ENST00000425498-0.10401-BLCA,UCEC
ENSG00000228288ENST00000417262LYRM7ENSG00000186687ENST00000507584-0.14371-KIRP
ENSG00000228288ENST00000417262MIER1ENSG00000198160ENST00000371016-0.13081-COAD,READ
ENSG00000228288ENST00000417262MIER1ENSG00000198160ENST00000371014-0.13081-COAD,READ
ENSG00000228288ENST00000417262MIER1ENSG00000198160ENST00000401042-0.13081-COAD,READ
ENSG00000228288ENST00000417262SACM1LENSG00000211456ENST00000418611-0.17911-CHOL,LUSC
ENSG00000228288ENST00000417262NCOA4ENSG00000266412ENST00000579039-0.10595-CHOL,COAD,READ
ENSG00000228288ENST00000417262APOL3ENSG00000128284ENST00000424878-0.1330255-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262APOL3ENSG00000128284ENST00000472303-0.1512425-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262APOL3ENSG00000128284ENST00000531095-0.24651-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262IL6STENSG00000134352ENST00000502326-0.147282-CHOL,BLCA,UCEC,LUSC,COAD,LIHC,READ
ENSG00000228288ENST00000425295CEP120ENSG00000168944ENST00000515110-0.6614302-UCEC
ENSG00000228288ENST00000425295FEM1BENSG00000169018ENST00000566008-0.129091-UCEC
ENSG00000228288ENST00000425295ANO6ENSG00000177119ENST00000425752-0.12501-UCEC,LUSC,BRCA
ENSG00000228288ENST00000425295ANO6ENSG00000177119ENST00000550630-0.10541-UCEC,LUSC,BRCA
ENSG00000228288ENST00000425295SEPTIN10ENSG00000186522ENST00000437928-0.126779-BLCA,UCEC
ENSG00000228288ENST00000425295SEPTIN10ENSG00000186522ENST00000415095-0.10471-BLCA,UCEC
ENSG00000228288ENST00000425295SEPTIN10ENSG00000186522ENST00000425498-0.10401-BLCA,UCEC
ENSG00000228288ENST00000425295LYRM7ENSG00000186687ENST00000507584-0.14371-KIRP
ENSG00000228288ENST00000425295SACM1LENSG00000211456ENST00000418611-0.17911-CHOL,LUSC
ENSG00000228288ENST00000425295NCOA4ENSG00000266412ENST00000579039-0.10595-CHOL,COAD,READ
ENSG00000228288ENST00000425295APOL3ENSG00000128284ENST00000424878-0.1161123-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295APOL3ENSG00000128284ENST00000472303-0.102820-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295APOL3ENSG00000128284ENST00000531095-0.24651-CHOL,KIRP,UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295IL6STENSG00000134352ENST00000502326-0.147282-CHOL,BLCA,UCEC,LUSC,COAD,LIHC,READ
ENSG00000228288ENST00000553157FERMT2ENSG00000073712ENST00000399304-0.101728-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000553157FERMT2ENSG00000073712ENST00000557562-0.20171-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000553157ACAT1ENSG00000075239ENST00000528370-0.1206332-CHOL,BLCA,COAD,LIHC,READ
ENSG00000228288ENST00000553157MPDZENSG00000107186ENST00000536827-0.163733-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000553157MPDZENSG00000107186ENST00000447879-0.163733-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000553157MPDZENSG00000107186ENST00000546205-0.413284-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000553157ACADMENSG00000117054ENST00000420607-0.149780-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000553157ACADMENSG00000117054ENST00000528016-0.12841-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000553157ITPR2ENSG00000123104ENST00000242737-0.3493139-CHOL,KIRP
ENSG00000228288ENST00000553157IVDENSG00000128928ENST00000559575-0.1053129-CHOL,LIHC
ENSG00000228288ENST00000553157IVDENSG00000128928ENST00000466756-0.14021-CHOL,LIHC
ENSG00000228288ENST00000553157EDNRBENSG00000136160ENST00000626030-0.1979417-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000553157N4BP2L1ENSG00000139597ENST00000380133-0.1101106-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000553157N4BP2L1ENSG00000139597ENST00000495479-0.2305453-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000553157TMBIM6ENSG00000139644ENST00000552635-0.1375335-CHOL
ENSG00000228288ENST00000553157TMBIM6ENSG00000139644ENST00000552370-0.180220-CHOL
ENSG00000228288ENST00000553157CYP4V2ENSG00000145476ENST00000378802-0.1311117-CHOL,LUSC,LIHC
ENSG00000228288ENST00000553157IQGAP2ENSG00000145703ENST00000513534-0.1058372-CHOL,KIRP,LUSC,COAD,READ
ENSG00000228288ENST00000553157ACSL1ENSG00000151726ENST00000504342-0.1219408-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000553157ACSL1ENSG00000151726ENST00000513317-0.14171-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000553157GNEENSG00000159921ENST00000447283-0.104744-CHOL,LIHC,READ
ENSG00000228288ENST00000553157GNEENSG00000159921ENST00000377902-0.104744-CHOL,LIHC,READ
ENSG00000228288ENST00000553157ACOX1ENSG00000161533ENST00000572047-0.10131-CHOL,COAD
ENSG00000228288ENST00000553157ACOX1ENSG00000161533ENST00000589301-0.17911-CHOL,COAD
ENSG00000228288ENST00000553157SFXN1ENSG00000164466ENST00000502393-2.1467481-CHOL
ENSG00000228288ENST00000553157ETFDHENSG00000171503ENST00000307738-0.1241471-CHOL,COAD,LIHC,READ
ENSG00000228288ENST00000553157SDHDENSG00000204370ENST00000534010-0.12181-CHOL,COAD,READ
ENSG00000228288ENST00000417262FERMT2ENSG00000073712ENST00000399304-0.101720-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000417262FERMT2ENSG00000073712ENST00000557562-0.20171-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000417262LPIN2ENSG00000101577ENST00000261596-0.11221-CHOL,LUSC,LIHC
ENSG00000228288ENST00000417262MPDZENSG00000107186ENST00000536827-0.163725-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000417262MPDZENSG00000107186ENST00000447879-0.163725-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000417262MPDZENSG00000107186ENST00000546205-0.413276-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000417262ACADMENSG00000117054ENST00000420607-0.149772-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000417262ACADMENSG00000117054ENST00000528016-0.12841-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000417262ITPR2ENSG00000123104ENST00000242737-0.3493131-CHOL,KIRP
ENSG00000228288ENST00000417262IVDENSG00000128928ENST00000559575-0.1053121-CHOL,LIHC
ENSG00000228288ENST00000417262IVDENSG00000128928ENST00000466756-0.11301-CHOL,LIHC
ENSG00000228288ENST00000417262EDNRBENSG00000136160ENST00000626030-0.4220356-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000417262HADHBENSG00000138029ENST00000405867-0.11611-CHOL,COAD
ENSG00000228288ENST00000417262N4BP2L1ENSG00000139597ENST00000380133-0.110198-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000417262N4BP2L1ENSG00000139597ENST00000495479-0.3297513-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000417262TMBIM6ENSG00000139644ENST00000552635-0.14671-CHOL
ENSG00000228288ENST00000417262TMBIM6ENSG00000139644ENST00000552370-0.180212-CHOL
ENSG00000228288ENST00000417262CYP4V2ENSG00000145476ENST00000378802-0.1311109-CHOL,LUSC,LIHC
ENSG00000228288ENST00000417262IQGAP2ENSG00000145703ENST00000396234-0.98001-CHOL,KIRP,LUSC,COAD,READ
ENSG00000228288ENST00000417262IQGAP2ENSG00000145703ENST00000504254-0.11171-CHOL,KIRP,LUSC,COAD,READ
ENSG00000228288ENST00000417262ACSL1ENSG00000151726ENST00000504342-0.1127164-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000417262ACSL1ENSG00000151726ENST00000513317-0.1149176-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000417262GNEENSG00000159921ENST00000447283-0.104736-CHOL,LIHC,READ
ENSG00000228288ENST00000417262GNEENSG00000159921ENST00000377902-0.104736-CHOL,LIHC,READ
ENSG00000228288ENST00000417262ACOX1ENSG00000161533ENST00000589301-0.17911-CHOL,COAD
ENSG00000228288ENST00000417262SFXN1ENSG00000164466ENST00000502393-0.1919388-CHOL
ENSG00000228288ENST00000417262ETFDHENSG00000171503ENST00000307738-3.395039-CHOL,COAD,LIHC,READ
ENSG00000228288ENST00000425295FERMT2ENSG00000073712ENST00000399304-0.101720-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000425295FERMT2ENSG00000073712ENST00000557562-0.20171-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000425295SLC25A24ENSG00000085491ENST00000569674-0.15271-READ
ENSG00000228288ENST00000425295LPIN2ENSG00000101577ENST00000261596-0.10101-CHOL,LUSC,LIHC
ENSG00000228288ENST00000425295MPDZENSG00000107186ENST00000536827-0.163725-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000425295MPDZENSG00000107186ENST00000447879-0.163725-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000425295MPDZENSG00000107186ENST00000546205-0.413276-CHOL,BLCA,UCEC,LUSC,BRCA,LIHC
ENSG00000228288ENST00000425295ACADMENSG00000117054ENST00000420607-0.149772-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000425295ACADMENSG00000117054ENST00000528016-0.12841-CHOL,KIRP,COAD,LIHC,READ
ENSG00000228288ENST00000425295ITPR2ENSG00000123104ENST00000242737-0.3493131-CHOL,KIRP
ENSG00000228288ENST00000425295IVDENSG00000128928ENST00000559575-0.1053121-CHOL,LIHC
ENSG00000228288ENST00000425295IVDENSG00000128928ENST00000466756-0.11301-CHOL,LIHC
ENSG00000228288ENST00000425295EDNRBENSG00000136160ENST00000626030-0.4220356-CHOL,BLCA,UCEC,LUSC,BRCA,LUAD,COAD,LIHC,READ
ENSG00000228288ENST00000425295N4BP2L1ENSG00000139597ENST00000380133-0.110198-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000425295N4BP2L1ENSG00000139597ENST00000495479-0.3297399-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000425295TMBIM6ENSG00000139644ENST00000552635-0.1179327-CHOL
ENSG00000228288ENST00000425295TMBIM6ENSG00000139644ENST00000552370-0.180212-CHOL
ENSG00000228288ENST00000425295CYP4V2ENSG00000145476ENST00000378802-0.1311109-CHOL,LUSC,LIHC
ENSG00000228288ENST00000425295IQGAP2ENSG00000145703ENST00000396234-0.98001-CHOL,KIRP,LUSC,COAD,READ
ENSG00000228288ENST00000425295ACSL1ENSG00000151726ENST00000504342-0.1085401-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000425295ACSL1ENSG00000151726ENST00000513317-0.1149176-CHOL,KIRP,LUSC,BRCA,LIHC
ENSG00000228288ENST00000425295GNEENSG00000159921ENST00000447283-0.104736-CHOL,LIHC,READ
ENSG00000228288ENST00000425295GNEENSG00000159921ENST00000377902-0.104736-CHOL,LIHC,READ
ENSG00000228288ENST00000425295ACOX1ENSG00000161533ENST00000589301-0.17911-CHOL,COAD
ENSG00000228288ENST00000425295SFXN1ENSG00000164466ENST00000502393-0.1733423-CHOL
ENSG00000228288ENST00000425295ETFDHENSG00000171503ENST00000307738-3.395039-CHOL,COAD,LIHC,READ
ENSG00000228288ENST00000425295SDHDENSG00000204370ENST00000534010-0.10881-CHOL,COAD,READ
ENSG00000228288ENST00000425295SELENOPENSG00000250722ENST00000507920-0.1015398-CHOL,BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000553157MGAT4AENSG00000071073ENST00000409391-0.7112515-LUSC,COAD,READ
ENSG00000228288ENST00000553157GNPTABENSG00000111670ENST00000550718-0.15621-READ
ENSG00000228288ENST00000553157GNPTABENSG00000111670ENST00000549940-0.138921-READ
ENSG00000228288ENST00000553157GNPTABENSG00000111670ENST00000392919-0.10641-READ
ENSG00000228288ENST00000417262MGAT4AENSG00000071073ENST00000414521-0.10161-LUSC,COAD,READ
ENSG00000228288ENST00000417262MGAT4AENSG00000071073ENST00000409391-0.5637584-LUSC,COAD,READ
ENSG00000228288ENST00000417262GNPTABENSG00000111670ENST00000550718-0.38431-READ
ENSG00000228288ENST00000417262GNPTABENSG00000111670ENST00000549940-0.138913-READ
ENSG00000228288ENST00000417262GNPTABENSG00000111670ENST00000392919-0.10641-READ
ENSG00000228288ENST00000425295MGAT4AENSG00000071073ENST00000409391-0.5637470-LUSC,COAD,READ
ENSG00000228288ENST00000425295GNPTABENSG00000111670ENST00000550718-0.38431-READ
ENSG00000228288ENST00000425295GNPTABENSG00000111670ENST00000549940-0.138913-READ
ENSG00000228288ENST00000425295GNPTABENSG00000111670ENST00000392919-0.10641-READ
ENSG00000228288ENST00000553157TRAPPC8ENSG00000153339ENST00000581057-0.13171-CHOL,READ
ENSG00000228288ENST00000553157CDC42SE2ENSG00000158985ENST00000502582-0.1208400-READ
ENSG00000228288ENST00000553157RELL1ENSG00000181826ENST00000454158-0.10021-COAD,READ
ENSG00000228288ENST00000425295TRAPPC8ENSG00000153339ENST00000581057-0.18371-CHOL,READ
ENSG00000228288ENST00000553157SECISBP2LENSG00000138593ENST00000561428-0.108582-LUSC,LUAD,READ
ENSG00000228288ENST00000553157SPATA13ENSG00000182957ENST00000434675-0.111693-LUSC
ENSG00000228288ENST00000553157CALCOCO2ENSG00000136436ENST00000509507-0.46421-UCEC
ENSG00000228288ENST00000553157CALCOCO2ENSG00000136436ENST00000576582-0.12701-UCEC
ENSG00000228288ENST00000553157CALCOCO2ENSG00000136436ENST00000507306-0.1008355-UCEC
ENSG00000228288ENST00000417262SECISBP2LENSG00000138593ENST00000561428-0.108574-LUSC,LUAD,READ
ENSG00000228288ENST00000417262ARL6IP5ENSG00000144746ENST00000485444-0.102357-LUSC
ENSG00000228288ENST00000417262PLCL2ENSG00000154822ENST00000419842-0.12821-KIRP,UCEC,LUSC,BRCA,COAD,READ
ENSG00000228288ENST00000417262CALCOCO2ENSG00000136436ENST00000509507-0.46421-UCEC
ENSG00000228288ENST00000417262CALCOCO2ENSG00000136436ENST00000576582-0.1269341-UCEC
ENSG00000228288ENST00000425295SECISBP2LENSG00000138593ENST00000561428-0.108574-LUSC,LUAD,READ
ENSG00000228288ENST00000425295ARL6IP5ENSG00000144746ENST00000484921-0.12211-LUSC
ENSG00000228288ENST00000425295ARL6IP5ENSG00000144746ENST00000485444-0.102357-LUSC
ENSG00000228288ENST00000425295CALCOCO2ENSG00000136436ENST00000509507-0.46421-UCEC
ENSG00000228288ENST00000553157DUSP3ENSG00000108861ENST00000590753-0.13511-BLCA
ENSG00000228288ENST00000553157KLHL5ENSG00000109790ENST00000504108-0.100371-BLCA,READ
ENSG00000228288ENST00000553157KLHL5ENSG00000109790ENST00000515612-0.202772-BLCA,READ
ENSG00000228288ENST00000553157WIPF1ENSG00000115935ENST00000359761-0.11031-BLCA,READ
ENSG00000228288ENST00000553157WIPF1ENSG00000115935ENST00000392546-0.11031-BLCA,READ
ENSG00000228288ENST00000553157WIPF1ENSG00000115935ENST00000409891-0.11661-BLCA,READ
ENSG00000228288ENST00000553157WIPF1ENSG00000115935ENST00000610916-0.11661-BLCA,READ
ENSG00000228288ENST00000553157WIPF1ENSG00000115935ENST00000410117-0.103629-BLCA,READ
ENSG00000228288ENST00000553157ADGRE5ENSG00000123146ENST00000358600-0.149719-UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157NCKAP1LENSG00000123338ENST00000545638-0.1063159-BLCA,LUSC,LUAD,COAD,READ
ENSG00000228288ENST00000553157ILKENSG00000166333ENST00000537806-0.13901-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000553157ILKENSG00000166333ENST00000420936-0.13901-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000553157ILKENSG00000166333ENST00000526114-0.10711-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000553157ILKENSG00000166333ENST00000527121-0.1012169-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000553157MAP3K3ENSG00000198909ENST00000584573-0.199617-UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157MAP3K3ENSG00000198909ENST00000361357-0.112620-UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157MAP3K3ENSG00000198909ENST00000577395-0.341071-UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157MAP3K3ENSG00000198909ENST00000581732-0.10381-UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262DUSP3ENSG00000108861ENST00000590753-0.13511-BLCA
ENSG00000228288ENST00000417262KLHL5ENSG00000109790ENST00000504108-0.100363-BLCA,READ
ENSG00000228288ENST00000417262KLHL5ENSG00000109790ENST00000515612-0.36601-BLCA,READ
ENSG00000228288ENST00000417262WIPF1ENSG00000115935ENST00000359761-0.11031-BLCA,READ
ENSG00000228288ENST00000417262WIPF1ENSG00000115935ENST00000392546-0.11031-BLCA,READ
ENSG00000228288ENST00000417262WIPF1ENSG00000115935ENST00000409891-0.16211-BLCA,READ
ENSG00000228288ENST00000417262WIPF1ENSG00000115935ENST00000610916-0.16211-BLCA,READ
ENSG00000228288ENST00000417262WIPF1ENSG00000115935ENST00000410117-0.103621-BLCA,READ
ENSG00000228288ENST00000417262ADGRE5ENSG00000123146ENST00000358600-0.149711-UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262NCKAP1LENSG00000123338ENST00000545638-0.1147313-BLCA,LUSC,LUAD,COAD,READ
ENSG00000228288ENST00000417262ILKENSG00000166333ENST00000299421-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000417262ILKENSG00000166333ENST00000537806-0.16381-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000417262ILKENSG00000166333ENST00000420936-0.16381-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000417262ILKENSG00000166333ENST00000528995-0.15511-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000417262ILKENSG00000166333ENST00000396751-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000417262MAP3K3ENSG00000198909ENST00000584573-0.19969-UCEC,LUSC,LUAD
ENSG00000228288ENST00000417262MAP3K3ENSG00000198909ENST00000577395-0.341063-UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295DUSP3ENSG00000108861ENST00000590753-0.13511-BLCA
ENSG00000228288ENST00000425295KLHL5ENSG00000109790ENST00000504108-0.100363-BLCA,READ
ENSG00000228288ENST00000425295KLHL5ENSG00000109790ENST00000515612-0.36601-BLCA,READ
ENSG00000228288ENST00000425295WIPF1ENSG00000115935ENST00000359761-0.11031-BLCA,READ
ENSG00000228288ENST00000425295WIPF1ENSG00000115935ENST00000392546-0.11031-BLCA,READ
ENSG00000228288ENST00000425295WIPF1ENSG00000115935ENST00000410117-0.103621-BLCA,READ
ENSG00000228288ENST00000425295ADGRE5ENSG00000123146ENST00000358600-0.149711-UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295ADGRE5ENSG00000123146ENST00000357355-0.10601-UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295ADGRE5ENSG00000123146ENST00000242786-0.10601-UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295NCKAP1LENSG00000123338ENST00000545638-0.1167241-BLCA,LUSC,LUAD,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000532063-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000299421-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000537806-0.16381-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000420936-0.16381-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000528995-0.15511-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000396751-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295ILKENSG00000166333ENST00000526318-0.10341-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295MAP3K3ENSG00000198909ENST00000584573-0.19969-UCEC,LUSC,LUAD
ENSG00000228288ENST00000425295MAP3K3ENSG00000198909ENST00000577395-0.341063-UCEC,LUSC,LUAD
ENSG00000228288ENST00000553157KIF13BENSG00000197892ENST00000524189-0.11791-LUSC,COAD,READ
ENSG00000228288ENST00000553157KIF13BENSG00000197892ENST00000523130-1.0450240-LUSC,COAD,READ
ENSG00000228288ENST00000553157CIPCENSG00000198894ENST00000555437-0.141025-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000553157CIPCENSG00000198894ENST00000555611-0.18541-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000417262KIF13BENSG00000197892ENST00000523130-1.0450232-LUSC,COAD,READ
ENSG00000228288ENST00000417262CIPCENSG00000198894ENST00000555437-0.141017-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000417262CIPCENSG00000198894ENST00000555611-0.23251-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000425295KIF13BENSG00000197892ENST00000523130-1.0450232-LUSC,COAD,READ
ENSG00000228288ENST00000425295CIPCENSG00000198894ENST00000555437-0.141017-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000425295CIPCENSG00000198894ENST00000555611-0.23251-BLCA,KIRP,COAD,READ
ENSG00000228288ENST00000553157HMGCRENSG00000113161ENST00000511206-0.12271-CHOL,KIRP
ENSG00000228288ENST00000553157HMGCRENSG00000113161ENST00000343975-0.12271-CHOL,KIRP
ENSG00000228288ENST00000553157HMGCRENSG00000113161ENST00000509085-0.107248-CHOL,KIRP
ENSG00000228288ENST00000553157HMGCRENSG00000113161ENST00000511986-0.130449-CHOL,KIRP
ENSG00000228288ENST00000553157TMTC1ENSG00000133687ENST00000539277-0.330071-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000553157TMTC1ENSG00000133687ENST00000550354-0.1221377-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000553157TACC1ENSG00000147526ENST00000520340-0.19291-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000553157TACC1ENSG00000147526ENST00000518415-0.136669-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000553157TACC1ENSG00000147526ENST00000520973-0.10791-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000553157TACC1ENSG00000147526ENST00000521866-0.1137343-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000417262HMGCRENSG00000113161ENST00000509085-0.107240-CHOL,KIRP
ENSG00000228288ENST00000417262HMGCRENSG00000113161ENST00000511986-0.130441-CHOL,KIRP
ENSG00000228288ENST00000417262TMTC1ENSG00000133687ENST00000539277-0.330063-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000417262TMTC1ENSG00000133687ENST00000550354-0.10841-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000417262TACC1ENSG00000147526ENST00000520340-0.19601-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000417262TACC1ENSG00000147526ENST00000518415-0.136661-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000417262TACC1ENSG00000147526ENST00000520973-0.10791-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000417262TACC1ENSG00000147526ENST00000521866-0.132328-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000425295HMGCRENSG00000113161ENST00000509085-0.107240-CHOL,KIRP
ENSG00000228288ENST00000425295HMGCRENSG00000113161ENST00000511986-0.130441-CHOL,KIRP
ENSG00000228288ENST00000425295TMTC1ENSG00000133687ENST00000539277-0.330063-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000425295TMTC1ENSG00000133687ENST00000550354-0.10841-BLCA,KIRP,BRCA,LUAD
ENSG00000228288ENST00000425295TACC1ENSG00000147526ENST00000520340-0.19601-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000425295TACC1ENSG00000147526ENST00000518415-0.136661-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000425295TACC1ENSG00000147526ENST00000520973-0.10791-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000425295TACC1ENSG00000147526ENST00000521866-0.132328-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,READ
ENSG00000228288ENST00000553157SNX18ENSG00000178996ENST00000326277-0.2707291-CHOL,KIRP,UCEC
ENSG00000228288ENST00000553157WNK1ENSG00000060237ENST00000574564-0.124920-KIRP
ENSG00000228288ENST00000553157TNS1ENSG00000079308ENST00000453356-0.19061-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000553157TBC1D9ENSG00000109436ENST00000442267-0.10341-KIRP,COAD,READ
ENSG00000228288ENST00000417262SNX18ENSG00000178996ENST00000326277-0.2707283-CHOL,KIRP,UCEC
ENSG00000228288ENST00000417262WNK1ENSG00000060237ENST00000574564-0.124912-KIRP
ENSG00000228288ENST00000417262TNS1ENSG00000079308ENST00000453356-0.19061-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000417262RAP1AENSG00000116473ENST00000356415-0.14111-BLCA,UCEC,LUSC,COAD,READ
ENSG00000228288ENST00000425295SNX18ENSG00000178996ENST00000326277-0.2707283-CHOL,KIRP,UCEC
ENSG00000228288ENST00000425295WNK1ENSG00000060237ENST00000574564-0.124912-KIRP
ENSG00000228288ENST00000425295TNS1ENSG00000079308ENST00000453356-0.19061-BLCA,KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000417262DOCK10ENSG00000135905ENST00000435582-0.117142-LUSC
ENSG00000228288ENST00000425295DOCK10ENSG00000135905ENST00000435582-0.117142-LUSC
ENSG00000228288ENST00000553157MYCBP2ENSG00000005810ENST00000466564-0.1443471-BRCA
ENSG00000228288ENST00000553157PPP1R12AENSG00000058272ENST00000550299-0.13691-BLCA,UCEC,READ
ENSG00000228288ENST00000553157SMARCA2ENSG00000080503ENST00000382186-0.7671290-CHOL,KIRP,UCEC
ENSG00000228288ENST00000553157PCNX1ENSG00000100731ENST00000439984-0.126620-BRCA
ENSG00000228288ENST00000417262PPP1R12AENSG00000058272ENST00000550299-0.15871-BLCA,UCEC,READ
ENSG00000228288ENST00000417262PPP1R12AENSG00000058272ENST00000546369-0.1500685-BLCA,UCEC,READ
ENSG00000228288ENST00000417262SMARCA2ENSG00000080503ENST00000382186-0.7671282-CHOL,KIRP,UCEC
ENSG00000228288ENST00000417262PCNX1ENSG00000100731ENST00000439984-0.126612-BRCA
ENSG00000228288ENST00000425295PPP1R12AENSG00000058272ENST00000550299-0.15871-BLCA,UCEC,READ
ENSG00000228288ENST00000425295PPP1R12AENSG00000058272ENST00000546369-0.1500571-BLCA,UCEC,READ
ENSG00000228288ENST00000425295SMARCA2ENSG00000080503ENST00000382186-0.7671282-CHOL,KIRP,UCEC
ENSG00000228288ENST00000425295PCNX1ENSG00000100731ENST00000439984-0.126612-BRCA
ENSG00000228288ENST00000553157PCNX1ENSG00000100731ENST00000555780-0.1241416-BRCA
ENSG00000228288ENST00000553157CERT1ENSG00000113163ENST00000357457-0.100332-LUSC
ENSG00000228288ENST00000553157CERT1ENSG00000113163ENST00000261415-0.3211447-LUSC
ENSG00000228288ENST00000553157TRIM23ENSG00000113595ENST00000381018-0.1086278-UCEC
ENSG00000228288ENST00000553157TRIM23ENSG00000113595ENST00000506400-0.10611-UCEC
ENSG00000228288ENST00000553157DNAJC16ENSG00000116138ENST00000472665-0.116910-CHOL,KIRP
ENSG00000228288ENST00000553157AHNAKENSG00000124942ENST00000530124-0.13361-BLCA,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000553157AHNAKENSG00000124942ENST00000257247-0.1013163-BLCA,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000417262PCNX1ENSG00000100731ENST00000555780-0.17281-BRCA
ENSG00000228288ENST00000417262CERT1ENSG00000113163ENST00000357457-0.100324-LUSC
ENSG00000228288ENST00000417262CERT1ENSG00000113163ENST00000261415-0.2411383-LUSC
ENSG00000228288ENST00000417262TRIM23ENSG00000113595ENST00000381018-0.1086270-UCEC
ENSG00000228288ENST00000417262TRIM23ENSG00000113595ENST00000506400-0.10611-UCEC
ENSG00000228288ENST00000417262DNAJC16ENSG00000116138ENST00000472665-0.11692-CHOL,KIRP
ENSG00000228288ENST00000417262AHNAKENSG00000124942ENST00000530124-0.1056242-BLCA,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000417262PTPRBENSG00000127329ENST00000550358-0.10751-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295PCNX1ENSG00000100731ENST00000555780-0.17281-BRCA
ENSG00000228288ENST00000425295CERT1ENSG00000113163ENST00000357457-0.100324-LUSC
ENSG00000228288ENST00000425295CERT1ENSG00000113163ENST00000261415-0.1624547-LUSC
ENSG00000228288ENST00000425295TRIM23ENSG00000113595ENST00000381018-0.1086270-UCEC
ENSG00000228288ENST00000425295TRIM23ENSG00000113595ENST00000506400-0.10611-UCEC
ENSG00000228288ENST00000425295DNAJC16ENSG00000116138ENST00000472665-0.11692-CHOL,KIRP
ENSG00000228288ENST00000425295PTPRBENSG00000127329ENST00000550358-0.10751-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157PTPRBENSG00000127329ENST00000538708-0.1290388-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157PTPRBENSG00000127329ENST00000550857-0.1290388-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157PTPRBENSG00000127329ENST00000261266-0.1290388-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157PTPRBENSG00000127329ENST00000547715-0.11321-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157STARD8ENSG00000130052ENST00000523864-0.10021-CHOL,BLCA,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000553157GIMAP6ENSG00000133561ENST00000493969-0.11121-KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000553157TM6SF1ENSG00000136404ENST00000258909-0.10651-LUSC,LUAD
ENSG00000228288ENST00000553157TM6SF1ENSG00000136404ENST00000561551-0.14761-LUSC,LUAD
ENSG00000228288ENST00000553157TLR4ENSG00000136869ENST00000394487-0.10811-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC
ENSG00000228288ENST00000417262PTPRBENSG00000127329ENST00000538708-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000417262PTPRBENSG00000127329ENST00000550857-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000417262PTPRBENSG00000127329ENST00000261266-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000417262PTPRBENSG00000127329ENST00000547715-0.10161-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000417262GIMAP6ENSG00000133561ENST00000493969-0.11731-KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000417262TM6SF1ENSG00000136404ENST00000561551-0.14761-LUSC,LUAD
ENSG00000228288ENST00000425295PTPRBENSG00000127329ENST00000538708-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295PTPRBENSG00000127329ENST00000550857-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295PTPRBENSG00000127329ENST00000261266-0.10756-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295PTPRBENSG00000127329ENST00000547715-0.10161-CHOL,KIRP,UCEC,LUSC,BRCA,LUAD
ENSG00000228288ENST00000425295GIMAP6ENSG00000133561ENST00000493969-0.11731-KIRP,UCEC,LUSC,BRCA,LUAD,COAD,READ
ENSG00000228288ENST00000425295TM6SF1ENSG00000136404ENST00000561551-0.14761-LUSC,LUAD
ENSG00000228288ENST00000425295TLR4ENSG00000136869ENST00000394487-0.10811-CHOL,UCEC,LUSC,BRCA,LUAD,LIHC

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000228288.5ENST00000553157.164389583
ENSG00000228288.5ENST00000417262.487111374
ENSG00000228288.5ENST00000425295.1105335652