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lncRNA: ENSG00000227388 |
Summary for RP11-112J3.16 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000227388 | Gene symbol | RP11-112J3.16 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-112J3.16 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000227388 | 3.820430e+01 | 2.776952e+00 | 4.717266e-01 | 5.886783e+00 | 3.940000e-09 | 3.980000e-08 | UP | CHOL |
| ENSG00000227388 | 7.262031e+01 | 1.097787e+00 | 1.435161e-01 | 7.649230e+00 | 2.020000e-14 | 1.760000e-13 | UP | THCA |
| ENSG00000227388 | 5.253079e+01 | 2.857589e+00 | 7.030839e-01 | 4.064364e+00 | 4.820000e-05 | 9.852950e-04 | UP | PCPG |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000227388 | 7.173256e-01 | 2.953009e-08 | CHOL | 3.547829e-06 |
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lncRNA-Protein interaction for RP11-112J3.16 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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