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lncRNA: ENSG00000227338 |
Summary for RP11-195B3.1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000227338 | Gene symbol | RP11-195B3.1 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | lincRNA | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for RP11-195B3.1 |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000227338 | 3.209384e+01 | -6.719840e+00 | 2.894896e-01 | -2.321272e+01 | 3.390000e-119 | 9.220000e-117 | DOWN | KIRC |
ENSG00000227338 | 8.198246e+01 | -8.169744e+00 | 4.667739e-01 | -1.750257e+01 | 1.370000e-68 | 4.740000e-66 | DOWN | KICH |
ENSG00000227338 | 1.809481e+01 | 3.349065e+00 | 9.141715e-01 | 3.663497e+00 | 2.487950e-04 | 1.155152e-03 | UP | BLCA |
ENSG00000227338 | 2.267332e+01 | -3.843592e+00 | 8.789409e-01 | -4.372981e+00 | 1.230000e-05 | 4.440000e-05 | DOWN | KIRP |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000227338 | -6.770182e-01 | 3.246242e-13 | KICH | 1.539101e-11 |
ENSG00000227338 | -3.933374e-01 | 6.223168e-24 | KIRC | 8.486138e-23 |
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lncRNA-Protein interaction for RP11-195B3.1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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