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lncRNA: ENSG00000224958 |
Summary for PGM5-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000224958 | Gene symbol | PGM5-AS1 |
| Gene name | PGM5 antisense RNA 1 | |
| HGNC | 44181 | |
| Entrez ID | 572558 | |
| Gene type | antisense | |
| Synonyms | 09q21.11|PGM5-AS1 | |
| UniProtAcc |
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Structure and expression level for PGM5-AS1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000224958 | 1.380185e+02 | -5.158228e+00 | 8.736667e-01 | -5.904114e+00 | 3.550000e-09 | 5.460000e-08 | DOWN | BLCA |
| ENSG00000224958 | 3.647924e+01 | -9.531741e+00 | 1.890235e+00 | -5.042621e+00 | 4.590000e-07 | 1.270000e-05 | DOWN | CESC |
| ENSG00000224958 | 2.637207e+01 | -5.451765e+00 | 4.557702e-01 | -1.196165e+01 | 5.640000e-33 | 2.220000e-31 | DOWN | UCEC |
| ENSG00000224958 | 3.959359e+02 | -1.711086e+00 | 2.478042e-01 | -6.904992e+00 | 5.020000e-12 | 4.550000e-11 | DOWN | PRAD |
| ENSG00000224958 | 8.138189e+01 | -3.592421e+00 | 4.814259e-01 | -7.462044e+00 | 8.520000e-14 | 2.070000e-12 | DOWN | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000224958 | -3.624645e-01 | 4.818650e-04 | KICH | 7.087284e-04 |
| ENSG00000224958 | -3.477487e-01 | 4.165742e-17 | PRAD | 5.178175e-16 |
| ENSG00000224958 | -3.961254e-01 | 1.713105e-23 | UCEC | 1.301960e-20 |
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lncRNA-Protein interaction for PGM5-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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