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lncRNA: ENSG00000224945 |
Summary for RP11-82L18.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000224945 | Gene symbol | RP11-82L18.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | sense_intronic | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-82L18.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000224945 | 8.003962e+01 | 1.979258e+00 | 1.557525e-01 | 1.270771e+01 | 5.360000e-37 | 2.470000e-35 | UP | THCA |
| ENSG00000224945 | 5.774704e+01 | -3.192670e+00 | 8.496492e-01 | -3.757633e+00 | 1.715280e-04 | 2.821220e-03 | DOWN | PCPG |
| ENSG00000224945 | 5.599393e+01 | -1.893494e+00 | 1.823352e-01 | -1.038469e+01 | 2.910000e-25 | 2.480000e-24 | DOWN | LUSC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for RP11-82L18.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000224945 | ENST00000429700 | RP11-82L18.2 | ENSG00000004534 | RBM6 | 41.45 | 94.269 | P78332 | RBP | NA |
| ENSG00000224945 | ENST00000429700 | RP11-82L18.2 | ENSG00000003756 | RBM5 | 39.26 | 92.3623 | P52756 | RBP | NA |
| ENSG00000224945 | ENST00000456944 | RP11-82L18.2 | ENSG00000003756 | RBM5 | 60.2 | 91.3149 | P52756 | RBP | NA |
| ENSG00000224945 | ENST00000456944 | RP11-82L18.2 | ENSG00000004534 | RBM6 | 57.9 | 94.4602 | P78332 | RBP | NA |
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