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lncRNA: ENSG00000223768

Summary for LINC00205

Gene summary

Gene information	Ensembl ID	ENSG00000223768
	Gene symbol	LINC00205
	Gene name	long intergenic non-protein coding RNA 205
	HGNC	16420
	Entrez ID	642852
	Gene type	lincRNA
	Synonyms	21q22.3\|LINC00205
	UniProtAcc

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Structure and expression level for LINC00205

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000223768	3.093807e+02	-1.619685e+00	3.121309e-01	-5.189120e+00	2.110000e-07	2.030000e-06	DOWN	GBM
ENSG00000223768	1.448469e+02	1.863486e+00	2.932151e-01	6.355354e+00	2.080000e-10	2.580000e-09	UP	CHOL
ENSG00000223768	7.622653e+01	1.549985e+00	1.493969e-01	1.037495e+01	3.220000e-25	9.990000e-24	UP	LIHC

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000223768	3.297738e-01	3.402456e-03	ACC	1.299811e-02
ENSG00000223768	5.717873e-01	4.078802e-05	CHOL	1.610457e-04
ENSG00000223768	-4.648528e-01	4.446612e-06	KICH	1.054109e-05
ENSG00000223768	4.151030e-01	4.306526e-18	LIHC	1.405954e-16
ENSG00000223768	-3.040803e-01	1.423586e-13	THCA	1.380184e-12

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lncRNA-Protein interaction for LINC00205

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000223768	ENST00000433465	LINC00205	ENSG00000130254	SAFB2	60.24	91.0904	Q14151	TF,RBP	eCLIP,catRAPID
ENSG00000223768	ENST00000433465	LINC00205	ENSG00000100201	DDX17	39.33	90.0746	Q92841	RBP	Predict
ENSG00000223768	ENST00000433465	LINC00205	ENSG00000116350	SRSF4	17.37	90.553	Q08170	RBP	NA

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lncRNA-DNA interaction for LINC00205

lncRNA targets the enhancer region and positively regulates the gene expression.

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for LINC00205

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000223768	ENST00000433465	exon_skip_500548	chr9:131494404-131494486	-15.70	-0.2379	PRRC2B	ENST00000357304	Frame-shift
ENSG00000223768	ENST00000433465	exon_skip_343170	chr2:127068162-127068255	-15.74	-0.2539	BIN1	ENST00000316724	In-frame
ENSG00000223768	ENST00000433465	exon_skip_346508	chr2:215380810-215381080	-23.98	-0.1355	FN1	ENST00000359671	In-frame
ENSG00000223768	ENST00000433465	exon_skip_353171	chr20:58898940-58898985	-11.18	-0.2541	GNAS	ENST00000371085,ENST00000371100	In-frame
ENSG00000223768	ENST00000433465	exon_skip_349689	chr20:25221231-25221333	-12.46	-0.1755	ENTPD6	ENST00000376652	In-frame
ENSG00000223768	ENST00000433465	exon_skip_384181	chr3:49311513-49311654	-14.89	-0.1182	USP4	ENST00000265560	In-frame
ENSG00000223768	ENST00000433465	exon_skip_293641	chr17:76091142-76091235	-12.06	-0.1587	EXOC7	ENST00000589210	In-frame
ENSG00000223768	ENST00000433465	exon_skip_332068	chr2:191402631-191402718	-13.91	-0.1880	MYO1B	ENST00000304164,ENST00000392318	In-frame
ENSG00000223768	ENST00000433465	exon_skip_81749	chr12:48135290-48135383	-17.00	-0.2361	PFKM	ENST00000312352,ENST00000359794,ENST00000547587	In-frame
ENSG00000223768	ENST00000433465	exon_skip_293617	chr17:76091142-76091235	-12.06	-0.1587	EXOC7	ENST00000589210	In-frame
ENSG00000223768	ENST00000433465	exon_skip_353172	chr20:58898940-58898985	-11.18	-0.2541	GNAS	ENST00000371085,ENST00000371100	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000223768	ENST00000433465	exon_skip_81540	chr12:42384939-42384996	-10.28	-0.3316	PPHLN1	ENST00000395568	In-frame
ENSG00000223768	ENST00000433465	exon_skip_382458	chr3:38131595-38131638	-9.95	-0.2618	ACAA1	ENST00000333167	Frame-shift

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45293362-45293447	203.00	-83.31	84	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45293709-45293788	175.00	-63.60	77	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45293945-45294028	173.00	-68.61	84	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45293558-45293653	168.00	-78.32	92	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45294151-45294251	159.00	-67.32	95	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45294531-45294622	156.00	-71.63	82	NA
ENSG00000223768	hsa-mir-22	ENST00000433465	chr21:45293491-45293564	146.00	-69.58	80	NA
ENSG00000223768	hsa-mir-378a	ENST00000433465	chr21:45293576-45293638	167.00	-59.09	66	NA
ENSG00000223768	hsa-mir-378a	ENST00000433465	chr21:45294420-45294483	160.00	-52.86	65	NA
ENSG00000223768	hsa-mir-378a	ENST00000433465	chr21:45294062-45294129	159.00	-60.00	58	NA
ENSG00000223768	hsa-mir-378a	ENST00000433465	chr21:45293436-45293496	157.00	-61.97	60	NA
ENSG00000223768	hsa-mir-378a	ENST00000433465	chr21:45294011-45294077	141.00	-60.57	61	NA

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Variants for LINC00205

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000223768	LINC00205,hsa-mir-378a,MSI2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,SMARCE1	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,RAI1	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,VMAC	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,FUT11	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,DERL2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,ARID4B	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,SNAPIN	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,DEDD	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,RGL2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,SDF2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,CHST14	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,BTBD2	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,CNP	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,USP21	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,MSL1	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-378a,PIGM	TGCT,CHOL,ACC,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,WDR33	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HSF2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PPWD1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RSRC2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ZHX2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,C1orf35	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PHF2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DDX42	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ARL6IP6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CERS5	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KAT7	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DAXX	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ATAT1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NR2C1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,COIL	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TRMT10B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,USP21	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TADA2A	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,YTHDC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CBX1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PRR14	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SFPQ	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,C2orf68	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM8A	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NRF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PM20D2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RPRD2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PCGF2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KANSL1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,INAVA	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ZNF7	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,BRD2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,EHMT1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ILKAP	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NAA16	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FAM117B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ABT1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SENP7	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PRCC	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,UNK	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,POLM	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RCE1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PARP2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NCOA5	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,LRRC75B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ZSWIM4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KAT2A	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,USPL1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SRSF3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HMGN1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,EHMT2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,WDR89	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TSEN2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ERCC3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ARHGAP19	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SRSF6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM4B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CCAR1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NUP43	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,EPC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,EXOSC2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FAM104B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RAD52	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PDE9A	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RPS6KB1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ZCCHC8	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DDX31	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SMARCC2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PCF11	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DUSP12	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,WDR5B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,VEZF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NAB1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PAXBP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HGS	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,LUC7L3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PAGR1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ING5	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CLK2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,IRF2BP2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SSRP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SNRNP48	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PCID2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,LUC7L2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SENP6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KHDC4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CEP95	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MRPL53	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MBTD1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,EIF4ENIF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TIA1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DPF2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RSBN1L	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MSL1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RC3H1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NOP58	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBBP6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CTPS2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TAF7	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TSEN54	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TIGD1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FRA10AC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TRIM13	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ADO	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CRTC2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,POLG2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MLLT6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NXF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NVL	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NUP214	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MRPL38	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBMX	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,H3-3B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PMS1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,UTP6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FBXO46	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PHF12	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SET	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MSL2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SSR2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM45	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MDC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM5	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TTF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SNRPA	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CXXC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,COPS7B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RCOR3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SOGA1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ANGEL2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SUGP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SUMO2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RGL2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TLK2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,USF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,C14orf93	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CDK5RAP3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CHTOP	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM14	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HINFP	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,UBTF	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,UIMC1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MKS1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PCIF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SF3B1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FNBP4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HMGB1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SRSF1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DGCR8	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,POGZ	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,BRD8	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,TBP	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FANCG	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SURF6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RYK	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PSME3IP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CTDSPL2	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,BUD13	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,RBM22	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,WRNIP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PRR3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CSTF3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SCAF4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KDM5B	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,LYSMD1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ING4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SOX4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,YY1AP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,CASC3	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,MED19	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,PRPF39	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,WBP1	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NOL11	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NFRKB	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,ZBTB5	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,LMBR1L	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,NELFE	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,SMAD4	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,DEDD	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,FBXL12	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,HEATR6	KICH,CHOL,LGG,KIRP,LIHC
ENSG00000223768	LINC00205,hsa-mir-22,KATNBL1	KICH,CHOL,LGG,KIRP,LIHC

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000223768.1	ENST00000433465.1	111	583	918

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential