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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000213468

Summary for FIRRE

check button Gene summary

Gene informationEnsembl ID

ENSG00000213468

Gene symbol

FIRRE

Gene namefirre intergenic repeating RNA element
HGNC

49627

Entrez ID

286467

Gene typelincRNA
SynonymsXq26.2|FIRRE
UniProtAcc

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Structure and expression level for FIRRE

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value

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lncRNA-Protein interaction for FIRRE

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

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lncRNA-DNA interaction for FIRRE

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for FIRRE

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for FIRRE

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name
LncEditing_408161ENSG00000213468.3chrX131704175-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408163ENSG00000213468.3chrX131704272-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408165ENSG00000213468.3chrX131704361-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408169ENSG00000213468.3chrX131704388-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408172ENSG00000213468.3chrX131704877-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408173ENSG00000213468.3chrX131704909-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408176ENSG00000213468.3chrX131705183-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408192ENSG00000213468.3chrX131728844-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408193ENSG00000213468.3chrX131729337-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408194ENSG00000213468.3chrX131729543-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408207ENSG00000213468.3chrX131733851-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408208ENSG00000213468.3chrX131733866-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408209ENSG00000213468.3chrX131733912-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408210ENSG00000213468.3chrX131733928-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408211ENSG00000213468.3chrX131733929-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408213ENSG00000213468.3chrX131734030-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408214ENSG00000213468.3chrX131734047-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408215ENSG00000213468.3chrX131734128-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408216ENSG00000213468.3chrX131734151-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408217ENSG00000213468.3chrX131734152-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408222ENSG00000213468.3chrX131734263-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408230ENSG00000213468.3chrX131734647-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408231ENSG00000213468.3chrX131734648-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408233ENSG00000213468.3chrX131734656-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408236ENSG00000213468.3chrX131734708-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408237ENSG00000213468.3chrX131734709-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408239ENSG00000213468.3chrX131734944-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408240ENSG00000213468.3chrX131734945-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408241ENSG00000213468.3chrX131734951-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408244ENSG00000213468.3chrX131735012-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408248ENSG00000213468.3chrX131735069-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408249ENSG00000213468.3chrX131735070-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408250ENSG00000213468.3chrX131735073-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408254ENSG00000213468.3chrX131735118-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408276ENSG00000213468.3chrX131738761-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408285ENSG00000213468.3chrX131739501-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408286ENSG00000213468.3chrX131739506-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408314ENSG00000213468.3chrX131741145-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408315ENSG00000213468.3chrX131741146-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408316ENSG00000213468.3chrX131741147-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408319ENSG00000213468.3chrX131741276-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408322ENSG00000213468.3chrX131741345-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408326ENSG00000213468.3chrX131741409-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408328ENSG00000213468.3chrX131741766-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408331ENSG00000213468.3chrX131741846-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408332ENSG00000213468.3chrX131741946-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408333ENSG00000213468.3chrX131741950-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408334ENSG00000213468.3chrX131741965-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408335ENSG00000213468.3chrX131742028-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408336ENSG00000213468.3chrX131742034-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408337ENSG00000213468.3chrX131742103-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408389ENSG00000213468.3chrX131744963-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408396ENSG00000213468.3chrX131746361-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408397ENSG00000213468.3chrX131746376-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408405ENSG00000213468.3chrX131746629-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408406ENSG00000213468.3chrX131746632-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408408ENSG00000213468.3chrX131746654-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408409ENSG00000213468.3chrX131746655-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408410ENSG00000213468.3chrX131746656-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408411ENSG00000213468.3chrX131746720-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408413ENSG00000213468.3chrX131746739-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408414ENSG00000213468.3chrX131746767-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408415ENSG00000213468.3chrX131746811-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408416ENSG00000213468.3chrX131746812-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408417ENSG00000213468.3chrX131747133-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408418ENSG00000213468.3chrX131747215-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408419ENSG00000213468.3chrX131747221-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408421ENSG00000213468.3chrX131747292-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408422ENSG00000213468.3chrX131747319-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408423ENSG00000213468.3chrX131747392-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408429ENSG00000213468.3chrX131747473-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408430ENSG00000213468.3chrX131747474-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408438ENSG00000213468.3chrX131747585-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001
LncEditing_408445ENSG00000213468.3chrX131747643-lincRNAFIRREENST00000427391.1lincRNAFIRRE-001

check buttonEdited-associated DElncRNAs in cancer.
Differentially expressed gene
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange
ENSG00000213468LncEditing_408161LAMLchrX_131704175_-1.037492e+015.145488e+009.884150e-016.686476e+002.286082e-111.660771e-10UP
ENSG00000213468LncEditing_408163LAMLchrX_131704272_-9.932997e+005.633447e+001.222178e+005.131846e+002.869148e-077.321071e-07UP
ENSG00000213468LncEditing_408165LAMLchrX_131704361_-1.028654e+014.990687e+009.583620e-016.952347e+003.592593e-123.335979e-11UP
ENSG00000213468LncEditing_408169LAMLchrX_131704388_-1.088898e+015.780922e+001.094694e+004.895854e+009.787961e-072.272205e-06UP
ENSG00000213468LncEditing_408172LAMLchrX_131704877_-1.015734e+015.628517e+001.174129e+005.216256e+001.825755e-074.916218e-07UP
ENSG00000213468LncEditing_408173LAMLchrX_131704909_-1.020236e+015.548689e+001.138065e+005.527022e+003.257126e-081.026161e-07UP
ENSG00000213468LncEditing_408176LAMLchrX_131705183_-1.039028e+015.697915e+001.153764e+004.926059e+008.390482e-071.970009e-06UP
ENSG00000213468LncEditing_408192LAMLchrX_131728844_-1.019544e+014.782857e+009.157676e-017.528852e+005.118851e-148.104847e-13UP
ENSG00000213468LncEditing_408193LAMLchrX_131729337_-8.998970e+004.822395e+001.111099e+006.916263e+004.637146e-124.068375e-11UP
ENSG00000213468LncEditing_408194LAMLchrX_131729543_-1.020923e+015.316226e+001.062248e+005.908703e+003.448126e-091.391645e-08UP
ENSG00000213468LncEditing_408207LAMLchrX_131733851_-1.038435e+014.493905e+008.275616e-018.522478e+001.561758e-174.704320e-16UP
ENSG00000213468LncEditing_408208LAMLchrX_131733866_-1.077815e+015.081002e+009.217225e-016.893602e+005.439691e-124.570081e-11UP
ENSG00000213468LncEditing_408209LAMLchrX_131733912_-1.070829e+015.727606e+001.107759e+004.356359e+001.322437e-052.444924e-05UP
ENSG00000213468LncEditing_408210LAMLchrX_131733928_-9.428437e+005.916186e+001.487318e+002.895859e+003.781218e-034.455920e-03UP
ENSG00000213468LncEditing_408211LAMLchrX_131733929_-1.032350e+015.409723e+001.072610e+005.317288e+001.053250e-073.011027e-07UP
ENSG00000213468LncEditing_408213LAMLchrX_131734030_-1.081026e+015.167209e+009.390166e-016.855401e+007.111285e-125.816184e-11UP
ENSG00000213468LncEditing_408214LAMLchrX_131734047_-1.138333e+015.128512e+008.693310e-016.856149e+007.074137e-125.816184e-11UP
ENSG00000213468LncEditing_408215LAMLchrX_131734128_-9.898338e+005.074365e+001.037388e+006.684731e+002.313495e-111.670857e-10UP
ENSG00000213468LncEditing_408216LAMLchrX_131734151_-1.083325e+015.017312e+009.005118e-017.046691e+001.832232e-121.854760e-11UP
ENSG00000213468LncEditing_408217LAMLchrX_131734152_-1.091597e+014.943565e+008.750311e-017.319375e+002.491284e-133.107813e-12UP
ENSG00000213468LncEditing_408222LAMLchrX_131734263_-1.061690e+015.665296e+001.103584e+004.976554e+006.472637e-071.552176e-06UP
ENSG00000213468LncEditing_408230LAMLchrX_131734647_-9.284990e+004.023439e+008.288636e-018.587152e+008.915197e-182.897439e-16UP
ENSG00000213468LncEditing_408231LAMLchrX_131734648_-9.162796e+004.989314e+001.140321e+006.691407e+002.210344e-111.615252e-10UP
ENSG00000213468LncEditing_408233LAMLchrX_131734656_-8.939641e+005.906719e+001.672633e+003.663686e+002.486115e-043.633992e-04UP
ENSG00000213468LncEditing_408236LAMLchrX_131734708_-9.714765e+004.488609e+008.977381e-017.843872e+004.368617e-158.563876e-14UP
ENSG00000213468LncEditing_408237LAMLchrX_131734709_-9.890109e+004.340453e+008.416510e-018.444546e+003.052292e-178.020385e-16UP
ENSG00000213468LncEditing_408239LAMLchrX_131734944_-1.036196e+014.966206e+009.424351e-017.155682e+008.325780e-139.019595e-12UP
ENSG00000213468LncEditing_408240LAMLchrX_131734945_-1.018692e+014.580396e+008.671718e-018.000941e+001.234721e-152.629105e-14UP
ENSG00000213468LncEditing_408241LAMLchrX_131734951_-1.011340e+014.956406e+009.719099e-016.763908e+001.343184e-111.030330e-10UP
ENSG00000213468LncEditing_408244LAMLchrX_131735012_-9.712330e+005.576156e+001.249147e+005.170144e+002.339137e-076.107472e-07UP
ENSG00000213468LncEditing_408248LAMLchrX_131735069_-1.144163e+015.455891e+009.359740e-015.732509e+009.895605e-093.573413e-08UP
ENSG00000213468LncEditing_408249LAMLchrX_131735070_-9.172411e+004.048953e+008.476357e-018.399269e+004.492665e-171.155925e-15UP
ENSG00000213468LncEditing_408250LAMLchrX_131735073_-9.891162e+005.119010e+001.052327e+006.329361e+002.461785e-101.316149e-09UP
ENSG00000213468LncEditing_408254LAMLchrX_131735118_-1.054058e+015.784377e+001.155107e+003.663655e+002.486416e-043.633992e-04UP
ENSG00000213468LncEditing_408276LAMLchrX_131738761_-1.080577e+015.517931e+001.031350e+005.131868e+002.868807e-077.321071e-07UP
ENSG00000213468LncEditing_408285LAMLchrX_131739501_-1.053390e+015.054593e+009.439543e-016.896161e+005.342662e-124.550474e-11UP
ENSG00000213468LncEditing_408286LAMLchrX_131739506_-1.125408e+015.740654e+001.029696e+004.802541e+001.566650e-063.524250e-06UP
ENSG00000213468LncEditing_408314LAMLchrX_131741145_-9.757984e+005.599925e+001.248166e+004.585736e+004.523905e-069.280768e-06UP
ENSG00000213468LncEditing_408315LAMLchrX_131741146_-9.648095e+005.556787e+001.256292e+005.021074e+005.138329e-071.259095e-06UP
ENSG00000213468LncEditing_408316LAMLchrX_131741147_-9.286689e+005.749580e+001.445697e+004.531145e+005.866480e-061.179984e-05UP
ENSG00000213468LncEditing_408319LAMLchrX_131741276_-9.460052e+005.295463e+001.194613e+006.345039e+002.223696e-101.215161e-09UP
ENSG00000213468LncEditing_408322LAMLchrX_131741345_-9.517846e+005.553174e+001.286467e+005.027205e+004.976814e-071.226819e-06UP
ENSG00000213468LncEditing_408326LAMLchrX_131741409_-9.436608e+004.865572e+001.046398e+006.514577e+007.289461e-114.523861e-10UP
ENSG00000213468LncEditing_408328LAMLchrX_131741766_-8.374305e+003.937968e+009.186801e-017.474963e+007.722567e-141.108997e-12UP
ENSG00000213468LncEditing_408331LAMLchrX_131741846_-8.587516e+005.080700e+001.320631e+005.517731e+003.434038e-081.073680e-07UP
ENSG00000213468LncEditing_408332LAMLchrX_131741946_-9.700709e+004.649072e+009.423762e-017.491729e+006.797217e-141.013602e-12UP
ENSG00000213468LncEditing_408333LAMLchrX_131741950_-9.580185e+004.706971e+009.753677e-017.324805e+002.392472e-133.040606e-12UP
ENSG00000213468LncEditing_408334LAMLchrX_131741965_-9.357468e+004.030599e+008.229614e-018.619161e+006.744629e-182.313782e-16UP
ENSG00000213468LncEditing_408335LAMLchrX_131742028_-8.705418e+006.021756e+001.880656e+002.762083e+005.743389e-036.543436e-03UP
ENSG00000213468LncEditing_408336LAMLchrX_131742034_-9.349423e+004.155909e+008.549104e-018.506824e+001.787629e-175.134237e-16UP
ENSG00000213468LncEditing_408337LAMLchrX_131742103_-9.539494e+004.908140e+001.043040e+006.651619e+002.898854e-112.034139e-10UP
ENSG00000213468LncEditing_408389LAMLchrX_131744963_-9.889671e+004.854484e+009.740850e-016.980390e+002.943620e-122.840133e-11UP
ENSG00000213468LncEditing_408396LAMLchrX_131746361_-9.749108e+005.666489e+001.277441e+003.987408e+006.679916e-051.081218e-04UP
ENSG00000213468LncEditing_408397LAMLchrX_131746376_-9.449566e+004.424889e+009.135700e-017.723735e+001.129692e-142.021985e-13UP
ENSG00000213468LncEditing_408405LAMLchrX_131746629_-9.994963e+005.251749e+001.077118e+006.200187e+005.639607e-102.785966e-09UP
ENSG00000213468LncEditing_408406LAMLchrX_131746632_-1.000802e+015.478417e+001.150317e+005.851445e+004.873195e-091.880749e-08UP
ENSG00000213468LncEditing_408408LAMLchrX_131746654_-1.044547e+015.541361e+001.093415e+005.618620e+001.924886e-086.459877e-08UP
ENSG00000213468LncEditing_408409LAMLchrX_131746655_-1.109373e+015.424878e+009.689154e-015.820580e+005.864388e-092.228468e-08UP
ENSG00000213468LncEditing_408410LAMLchrX_131746656_-1.123070e+015.445463e+009.575598e-015.727861e+001.017049e-083.661971e-08UP
ENSG00000213468LncEditing_408411LAMLchrX_131746720_-9.153848e+004.236905e+008.997924e-018.200058e+002.402703e-165.495071e-15UP
ENSG00000213468LncEditing_408413LAMLchrX_131746739_-9.076255e+004.908192e+001.127516e+006.508081e+007.611671e-114.700207e-10UP
ENSG00000213468LncEditing_408414LAMLchrX_131746767_-9.611956e+005.358861e+001.186375e+005.673374e+001.400122e-084.870848e-08UP
ENSG00000213468LncEditing_408415LAMLchrX_131746811_-9.789568e+005.626697e+001.251632e+005.043535e+004.570101e-071.128815e-06UP
ENSG00000213468LncEditing_408416LAMLchrX_131746812_-9.733161e+005.209968e+001.109097e+006.187832e+006.099731e-102.989352e-09UP
ENSG00000213468LncEditing_408417LAMLchrX_131747133_-8.802313e+003.740858e+008.100358e-018.596930e+008.187703e-182.732922e-16UP
ENSG00000213468LncEditing_408418LAMLchrX_131747215_-9.128214e+004.517244e+009.853286e-017.456331e+008.896487e-141.252077e-12UP
ENSG00000213468LncEditing_408419LAMLchrX_131747221_-9.467469e+004.360579e+008.940871e-018.083991e+006.268077e-161.382335e-14UP
ENSG00000213468LncEditing_408421LAMLchrX_131747292_-9.182146e+004.582526e+009.973188e-017.762258e+008.343059e-151.561163e-13UP
ENSG00000213468LncEditing_408422LAMLchrX_131747319_-9.160355e+005.690967e+001.456177e+004.425919e+009.603245e-061.844480e-05UP
ENSG00000213468LncEditing_408423LAMLchrX_131747392_-9.442511e+004.862905e+001.044548e+006.992822e+002.694111e-122.640656e-11UP
ENSG00000213468LncEditing_408429LAMLchrX_131747473_-1.060858e+015.551560e+001.070358e+005.411404e+006.253236e-081.865398e-07UP
ENSG00000213468LncEditing_408430LAMLchrX_131747474_-1.076010e+015.133141e+009.365244e-016.776572e+001.230611e-119.680283e-11UP
ENSG00000213468LncEditing_408438LAMLchrX_131747585_-1.098533e+015.400726e+009.762260e-016.417656e+001.383885e-107.912492e-10UP
ENSG00000213468LncEditing_408445LAMLchrX_131747643_-1.159764e+015.614778e+009.555388e-015.551415e+002.833672e-089.066281e-08UP

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value
ENSG00000213468LncEditing_408215-3.946697e-011.420271e-022.454839e-02
ENSG00000213468LncEditing_408216-4.080689e-011.840089e-022.825073e-02
ENSG00000213468LncEditing_408233-6.279917e-013.988965e-031.243871e-02
ENSG00000213468LncEditing_408248-4.833773e-012.642525e-023.441248e-02
ENSG00000213468LncEditing_408254-6.169341e-011.090554e-022.080663e-02
ENSG00000213468LncEditing_408276-5.453470e-018.666024e-031.795105e-02
ENSG00000213468LncEditing_4082853.575412e-013.789319e-024.231649e-02
ENSG00000213468LncEditing_408314-6.480594e-014.600639e-044.764947e-03

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000213468.3ENST00000427391.1782352