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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000212694

Summary for LINC01089

check button Gene summary

Gene informationEnsembl ID

ENSG00000212694

Gene symbol

LINC01089

Gene namelong intergenic non-protein coding RNA 1089
HGNC

27886

Entrez ID

338799

Gene typelincRNA
SynonymsLINC01089|12q24.31
UniProtAcc

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Structure and expression level for LINC01089

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002126944.344592e+021.558542e+003.381352e-014.609226e+004.040000e-062.360000e-05UPCHOL
ENSG000002126941.053297e+031.249029e+001.479062e-018.444737e+003.050000e-175.400000e-16UPPRAD
ENSG000002126942.139940e+021.678433e+001.334751e-011.257487e+012.900000e-362.380000e-34UPLIHC

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG000002126945.296323e-011.830987e-04CHOL4.752655e-04
ENSG000002126943.534036e-013.282587e-13LIHC2.194983e-12

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lncRNA-Protein interaction for LINC01089

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
Epi result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000212694ENST00000543334LINC01089ENSG00000197114ZGPAT28.9290.6801Q8N5A5TF,EpiPredict
ENSG00000212694ENST00000543167LINC01089ENSG00000166987MBD660.9391.3156Q96DN6TF,EpiNA
ENSG00000212694ENST00000428029LINC01089ENSG00000166987MBD637.2591.9773Q96DN6TF,EpiNA
ENSG00000212694ENST00000541694LINC01089ENSG00000166987MBD634.4892.0342Q96DN6TF,EpiNA
ENSG00000212694ENST00000428029LINC01089ENSG00000089094KDM2B33.693.0277Q8NHM5TF,EpiPredict
ENSG00000212694ENST00000545885LINC01089ENSG00000272333KMT2B32.6591.0054Q9UMN6TF,EpiPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000089094KDM2B22.0792.0159Q8NHM5TF,EpiPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000112511PHF14.8990.7723O43189TF,EpiNA
ENSG00000212694ENST00000429892LINC01089ENSG00000104885DOT1L51.9595.391Q8TEK3TF,EpiPredict
ENSG00000212694ENST00000535643LINC01089ENSG00000272333KMT2B44.4791.588Q9UMN6TF,EpiPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000104885DOT1L80.4793.2194Q8TEK3TF,EpiPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000166987MBD668.393.7714Q96DN6TF,EpiNA
ENSG00000212694ENST00000543334LINC01089ENSG00000141644MBD117.5890.7575Q9UIS9TF,EpiPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000155363MOV1079.0293.0783Q9HCE1RBP,EpiNA
ENSG00000212694ENST00000429892LINC01089ENSG00000173894CBX216.0792.3118Q14781TF,EpiPredict

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000212694ENST00000543167LINC01089ENSG00000166987MBD660.9392.2567Q96DN6TF,EpiNA
ENSG00000212694ENST00000428029LINC01089ENSG00000167967E4F155.6491.4007Q66K89TFPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000166987MBD637.2592.5986Q96DN6TF,EpiNA
ENSG00000212694ENST00000541694LINC01089ENSG00000166987MBD634.4891.253Q96DN6TF,EpiNA
ENSG00000212694ENST00000428029LINC01089ENSG00000089094KDM2B33.693.5895Q8NHM5TF,EpiPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000167967E4F133.4992.8848Q66K89TFPredict
ENSG00000212694ENST00000545885LINC01089ENSG00000272333KMT2B32.6590.7664Q9UMN6TF,EpiPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000166526ZNF331.1190.3578P17036TFNA
ENSG00000212694ENST00000538335LINC01089ENSG00000126804ZBTB127.0792.7443Q9Y2K1TFPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000089094KDM2B22.0791.8022Q8NHM5TF,EpiPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000196378ZNF3414.2493.0064Q8IZ26TFPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000185670ZBTB312.1991.1792Q9H5J0TFPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000112511PHF14.8990.7002O43189TF,EpiNA
ENSG00000212694ENST00000543334LINC01089ENSG00000167967E4F1102.6490.567Q66K89TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000099326MZF186.6593.1374P28698TFChIP-seq,catRAPID
ENSG00000212694ENST00000543334LINC01089ENSG00000104885DOT1L80.4793.2571Q8TEK3TF,EpiPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000166987MBD668.394.1254Q96DN6TF,EpiNA
ENSG00000212694ENST00000543334LINC01089ENSG00000198521ZNF4366.3192.7627P17038TFNA
ENSG00000212694ENST00000543334LINC01089ENSG00000154832CXXC160.2691.6641Q9P0U4TF,EpiPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000126804ZBTB156.2890.698Q9Y2K1TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000147789ZNF752.8492.0753P17097TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000198040ZNF8452.2691.9004P51523TFChIP-seq
ENSG00000212694ENST00000543334LINC01089ENSG00000166432ZMAT138.1693.9872Q5H9K5TFNA
ENSG00000212694ENST00000543334LINC01089ENSG00000065029ZNF7621.2391.4976P36508TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000141644MBD117.5892.1004Q9UIS9TF,EpiPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000142065ZFP1416.2690.7766Q9HCL3TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000180035ZNF4815.4291.5181Q96MX3TFNA
ENSG00000212694ENST00000543334LINC01089ENSG00000198429ZNF6912.5890.3293Q9UC07TFNA
ENSG00000212694ENST00000543334LINC01089ENSG00000167766ZNF8310.7991.5965P51522TFChIP-seq
ENSG00000212694ENST00000543334LINC01089ENSG00000125817CENPB8.791.3056P07199TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000196378ZNF348.5790.2235Q8IZ26TFPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000154957ZNF187.4292.0272P17022TFPredict
ENSG00000212694ENST00000535643LINC01089ENSG00000166987MBD652.9490.5292Q96DN6TF,EpiNA
ENSG00000212694ENST00000429892LINC01089ENSG00000104885DOT1L51.9595.589Q8TEK3TF,EpiPredict
ENSG00000212694ENST00000535643LINC01089ENSG00000089094KDM2B49.8591.3549Q8NHM5TF,EpiPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000141258SGSM248.0394.0035O43147TFPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000198521ZNF4345.3292.8871P17038TFNA
ENSG00000212694ENST00000429892LINC01089ENSG00000236287ZBED545.194.7407Q49AG3TFNA
ENSG00000212694ENST00000535643LINC01089ENSG00000272333KMT2B44.4793.9121Q9UMN6TF,EpiPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000185122HSF135.1892.0733Q00613TFChIP-seq
ENSG00000212694ENST00000429892LINC01089ENSG00000101412E2F122.5491.4121Q01094TFChIP-seq,catRAPID
ENSG00000212694ENST00000429892LINC01089ENSG00000128272ATF418.8390.221P18848TFNA
ENSG00000212694ENST00000429892LINC01089ENSG00000135457TFCP216.9893.405Q12800TFPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000173894CBX216.0792.5815Q14781TF,EpiPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000120798NR2C112.9793.0693P13056TFNA
ENSG00000212694ENST00000429892LINC01089ENSG00000102878HSF412.0994.0935Q9ULV5TFNA
ENSG00000212694ENST00000429892LINC01089ENSG00000196378ZNF3411.8793.0455Q8IZ26TFPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000205250E2F49.591.9272Q16254TFChIP-seq,catRAPID
ENSG00000212694ENST00000429892LINC01089ENSG00000126456IRF33.7193.7659Q14653TFChIP-seq

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000212694ENST00000429892LINC01089ENSG00000155363MOV1079.0292.8113Q9HCE1RBP,EpiNA
ENSG00000212694ENST00000429892LINC01089ENSG00000013573DDX1167.3695.9039Q96FC9RBPPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000122965RBM1962.2395.8819Q9Y4C8RBPPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000139746RBM2652.9895.7115Q5T8P6RBPPredict
ENSG00000212694ENST00000429892LINC01089ENSG00000179151EDC318.3792.1284Q96F86RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000122965RBM1998.6490.6648Q9Y4C8RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000004534RBM697.3793.5322P78332RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000064607SUGP296.4690.7163Q8IX01RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000163728TTC1496.2892.1191Q96N46RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000003756RBM594.6792.2424P52756RBPeCLIP,catRAPID,Scan,pipeline,widely,used,MATCH,algorithm
ENSG00000212694ENST00000543334LINC01089ENSG00000198000NOL891.894.2042Q76FK4RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000182872RBM1090.8291.5733P98175RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000129351ILF345.291.5265Q12906RBPeCLIP,catRAPID
ENSG00000212694ENST00000543334LINC01089ENSG00000105705SUGP133.5290.0543Q8IWZ8RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000239306RBM1421.0491.22Q96PK6RBPNA
ENSG00000212694ENST00000543334LINC01089ENSG00000116350SRSF419.7691.9169Q08170RBPNA
ENSG00000212694ENST00000543334LINC01089ENSG00000089280FUS17.0393.7456P35637RBPHITS-CLIP
ENSG00000212694ENST00000543334LINC01089ENSG00000111605CPSF615.4295.0463Q16630RBPeCLIP,PAR-CLIP
ENSG00000212694ENST00000543334LINC01089ENSG00000121390PSPC113.1690.1982Q8WXF1RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000111364DDX5512.5690.9467Q8NHQ9RBPPredict
ENSG00000212694ENST00000543334LINC01089ENSG00000149532CPSF79.0990.3733Q8N684RBPPAR-CLIP
ENSG00000212694ENST00000543167LINC01089ENSG00000176102CSTF362.8392.0851Q12996RBPNA
ENSG00000212694ENST00000543167LINC01089ENSG00000079134THOC161.8190.0652Q96FV9RBPNA
ENSG00000212694ENST00000538335LINC01089ENSG00000100650SRSF553.9690.3359Q13243RBPPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000124193SRSF633.4590.6223Q13247RBPPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000134597RBMX226.9590.5816Q9Y388RBPNA
ENSG00000212694ENST00000538335LINC01089ENSG00000198000NOL824.0693.5533Q76FK4RBPPredict
ENSG00000212694ENST00000538335LINC01089ENSG00000116350SRSF422.6591.7844Q08170RBPNA
ENSG00000212694ENST00000538335LINC01089ENSG00000163728TTC1420.4491.5497Q96N46RBPPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000111605CPSF617.0795.3132Q16630RBPeCLIP,PAR-CLIP
ENSG00000212694ENST00000538335LINC01089ENSG00000121390PSPC116.5492.3316Q8WXF1RBPPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000278619MRM115.5491.7601Q6IN84RBPNA
ENSG00000212694ENST00000538335LINC01089ENSG00000147274RBMX15.2790.5825P38159RBPNA
ENSG00000212694ENST00000543167LINC01089ENSG00000111605CPSF614.7891.635Q16630RBPeCLIP,PAR-CLIP
ENSG00000212694ENST00000543167LINC01089ENSG00000111364DDX5513.1491.2387Q8NHQ9RBPPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000143486EIF2D10.190.8918P41214RBPPredict
ENSG00000212694ENST00000428029LINC01089ENSG00000149532CPSF77.2294.586Q8N684RBPPAR-CLIP
ENSG00000212694ENST00000543167LINC01089ENSG00000149532CPSF77.0190.5875Q8N684RBPPAR-CLIP
ENSG00000212694ENST00000538335LINC01089ENSG00000161547SRSF26.0590.2322Q01130RBPNA

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lncRNA-DNA interaction for LINC01089

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
RBM19,SLIRP,ILF3,GLI4,RBM39,EDC3,MYPOP,IRF3,CIRBP,DDX56,IMP3,TIGD5,MZF1,NRF1,AKAP8,TFEB,SUGP2,DMTF1,HES6,CENPB,ZNF74,TBP,DDX55,KMT2B,ZFP14,SAFB2,THOC1,CHTOP,TFAP4,ZBED5,CENPT,TTC14,ZGLP1,PCBP2,MRM1,SUGP1,SRSF4,LSM4,RBMX,RBM4B,U2AF2,CSTF3,RBM26,CPSF1,RNPS1,RBM14,ERAL1,ZBTB3,MYEF2,MBD1,CWC15,NFYC,DHX34,CPSF4,PPIE,CPSF7,NELFE,USF1,CXXC1,ZNF34,DDX17,MOV10,HSF1,ZNF22,PHF1,THYN1,ZC3H8,TGIF2,HSF4,NOL9,THOC6,ZNF48,SGSM2,ATF4,PSPC1,RBM45,TIGD1,RBM10,DDX51,E2F4,MBD4,PCBP4,THAP3,SRSF2,MBD6,ZGPAT,EIF3B,TFCP2,PBX4,ZMAT1,ZNF83,NSUN6,ZNF3,NXF1,ZNF8,ZNF18,EIF2D,DDX11,KDM2B,RBM6,HMGN3,NOP2,RBM48,E2F1,GMEB2,NOL3,RBM5,NFYB,ZNF43,DOT1L,ZNF84,PIN1,RXRB,TRA2A,NAIF1,ZNF69,DDX41,HINFP,XPA,NR2C1,ZFP3,SFPQ,RBM33,NOL8,SRSF7
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.
Only predicted by TDF
CWC15,PPIE,CBX2,KMT2B,HES6,NOL9,TBP,DDX17,NRF1,MZF1,MLXIP,ZNF18,RBM5,CXXC1,MBD1,ZMAT1,TIGD1,TBX19,TFAP4,ZNF3,RBM19,ZNF83,LSM8,RBM6,MYPOP,EIF2D,ZFP3,AGO4,ZGPAT,PBX4,RBM39,TFEB,THAP3,PCBP4,IRF3,CIRBP,SRP14
Exist in public source
NA

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for LINC01089

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
PCBP1,STAU1,CSDE1,SF3A1,FOSL2
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
lncRNA and exonskipping events positive correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation
ENSG00000212694ENST00000538335exon_skip_111672chr14:23089981-23090101-19.05-0.1886ACIN1ENST00000262710In-frame
ENSG00000212694ENST00000538335exon_skip_386274chr3:108049618-108049651-6.02-0.2076CD47ENST00000361309In-frame
ENSG00000212694ENST00000538335exon_skip_1234chr1:11658532-11658628-17.70-0.2299FBXO44ENST00000251547,ENST00000376770In-frame

-lncRNA and exonskipping events are negatively correlated.
lncRNA and exonskipping events negative correlated
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF
ENSG00000212694ENST00000538335exon_skip_41841chr10:68756272-68756483-25.91-0.1309CCAR1ENST00000265872Frame-shift
ENSG00000212694ENST00000538335exon_skip_62623chr11:69079833-69079883-10.27-0.2445TPCN2ENST00000294309Frame-shift
ENSG00000212694ENST00000538335exon_skip_66482chr11:126274926-126275021-12.56-0.8373FOXRED1ENST00000263578Frame-shift
ENSG00000212694ENST00000538335exon_skip_111863chr14:23565815-23565892-16.63-0.4495AP1G2ENST00000308724,ENST00000397120Frame-shift
ENSG00000212694ENST00000538335exon_skip_315468chr19:12677107-12677211-17.92-0.1906DHPSENST00000210060Frame-shift
ENSG00000212694ENST00000538335exon_skip_319223chr19:43526200-43526349-24.00-0.1791ETHE1ENST00000292147Frame-shift
ENSG00000212694ENST00000538335exon_skip_374375chr3:49675182-49675309-19.97-0.1737APEHENST00000296456Frame-shift
ENSG00000212694ENST00000538335exon_skip_382458chr3:38131595-38131638-12.40-0.4276ACAA1ENST00000333167Frame-shift
ENSG00000212694ENST00000538335exon_skip_446758chr5:178212972-178213103-21.98-0.2113PHYKPLENST00000308158Frame-shift
ENSG00000212694ENST00000538335exon_skip_470226chr7:103307595-103307708-14.86-0.1615PMPCBENST00000249269Frame-shift
ENSG00000212694ENST00000538335exon_skip_499567chr9:128325142-128325239-18.29-0.2375COQ4ENST00000300452Frame-shift
ENSG00000212694ENST00000538335exon_skip_41813chr10:68337857-68337996-24.11-0.1976HNRNPH3ENST00000265866Frame-shift
ENSG00000212694ENST00000538335exon_skip_110959chr14:20372732-20372857-16.65-0.1487TEP1ENST00000262715Frame-shift
ENSG00000212694ENST00000538335exon_skip_309204chr19:49181348-49181461-21.71-0.2029TRPM4ENST00000252826Frame-shift
ENSG00000212694ENST00000538335exon_skip_340759chr2:85552415-85552567-21.80-0.1535GGCXENST00000233838Frame-shift
ENSG00000212694ENST00000538335exon_skip_370518chr22:50247691-50247776-17.62-0.2318HDAC10ENST00000216271Frame-shift
ENSG00000212694ENST00000538335exon_skip_9446chr1:147270931-147271005-12.33-0.3425CHD1LENST00000369258Frame-shift
ENSG00000212694ENST00000538335exon_skip_16568chr1:201989382-201989531-17.30-0.1373RNPEPENST00000295640Frame-shift
ENSG00000212694ENST00000538335exon_skip_29134chr1:111124741-111124881-13.56-0.1085DRAM2ENST00000286692,ENST00000539140Frame-shift
ENSG00000212694ENST00000538335exon_skip_38175chr1:234398381-234398553-16.02-0.1008TARBP1ENST00000040877Frame-shift
ENSG00000212694ENST00000538335exon_skip_52701chr10:97468965-97469104-21.82-0.2058MMS19ENST00000370782,ENST00000438925Frame-shift
ENSG00000212694ENST00000538335exon_skip_53559chr10:101793912-101793998-12.69-0.1983OGAENST00000361464Frame-shift
ENSG00000212694ENST00000538335exon_skip_64154chr11:86268455-86268561-13.90-0.1580EEDENST00000263360Frame-shift
ENSG00000212694ENST00000538335exon_skip_74009chr11:64773429-64773505-14.08-0.2933SF1ENST00000377390Frame-shift
ENSG00000212694ENST00000538335exon_skip_79575chr12:6727925-6728001-12.57-0.2328COPS7AENST00000229251,ENST00000534877,ENST00000534947,ENST00000539735,ENST00000543155Frame-shift
ENSG00000212694ENST00000538335exon_skip_92074chr12:50142052-50142110-6.76-0.1186CERS5ENST00000317551Frame-shift
ENSG00000212694ENST00000538335exon_skip_95407chr12:95040475-95040597-21.21-0.1844NR2C1ENST00000333003Frame-shift
ENSG00000212694ENST00000538335exon_skip_108095chr14:73955450-73955509-12.40-0.3647COQ6ENST00000334571Frame-shift
ENSG00000212694ENST00000538335exon_skip_111870chr14:23566561-23566686-16.75-0.2068AP1G2ENST00000397120Frame-shift
ENSG00000212694ENST00000538335exon_skip_114365chr14:74290026-74290118-18.66-0.2304ABCD4ENST00000356924Frame-shift
ENSG00000212694ENST00000538335exon_skip_123601chr15:74897010-74897219-23.40-0.1130MPIENST00000352410Frame-shift
ENSG00000212694ENST00000538335exon_skip_127618chr15:58890280-58890461-21.23-0.1179SLTMENST00000380516Frame-shift
ENSG00000212694ENST00000538335exon_skip_133217chr16:8635038-8635079-10.38-0.3348METTL22ENST00000381920Frame-shift
ENSG00000212694ENST00000538335exon_skip_138351chr16:70469151-70469323-27.23-0.1973FUKENST00000288078Frame-shift
ENSG00000212694ENST00000538335exon_skip_139422chr16:89114338-89114487-29.30-0.2170ACSF3ENST00000317447,ENST00000406948Frame-shift
ENSG00000212694ENST00000538335exon_skip_152672chr17:42540949-42541206-32.21-0.1382NAGLUENST00000225927Frame-shift
ENSG00000212694ENST00000538335exon_skip_290158chr17:42953723-42953778-7.46-0.1622AARSD1ENST00000427569Frame-shift
ENSG00000212694ENST00000538335exon_skip_296625chr18:42057882-42058051-19.13-0.1181PIK3C3ENST00000262039Frame-shift
ENSG00000212694ENST00000538335exon_skip_324294chr2:27774423-27774530-13.24-0.1337MRPL33ENST00000296102Frame-shift
ENSG00000212694ENST00000538335exon_skip_326885chr2:74490024-74490127-21.29-0.3490TTC31ENST00000233623Frame-shift
ENSG00000212694ENST00000538335exon_skip_333962chr2:219247112-219247246-18.57-0.1821STK16ENST00000396738,ENST00000409638Frame-shift
ENSG00000212694ENST00000538335exon_skip_335558chr2:240596680-240596942-42.48-0.1823CAPN10ENST00000391984Frame-shift
ENSG00000212694ENST00000538335exon_skip_341860chr2:96733518-96733601-15.43-0.2085LMAN2LENST00000264963Frame-shift
ENSG00000212694ENST00000538335exon_skip_353131chr20:58669290-58669453-39.91-0.2851STX16ENST00000371141Frame-shift
ENSG00000212694ENST00000538335exon_skip_361485chr21:29008239-29008307-12.88-0.3067RWDD2BENST00000493196Frame-shift
ENSG00000212694ENST00000538335exon_skip_370525chr22:50250426-50250523-21.12-0.2296HDAC10ENST00000216271Frame-shift
ENSG00000212694ENST00000538335exon_skip_377198chr3:123130479-123130616-24.64-0.1910PDIA5ENST00000316218Frame-shift
ENSG00000212694ENST00000538335exon_skip_380242chr3:186784961-186785101-17.02-0.1520EIF4A2ENST00000323963Frame-shift
ENSG00000212694ENST00000538335exon_skip_384420chr3:49812647-49812738-15.37-0.2605UBA7ENST00000333486Frame-shift
ENSG00000212694ENST00000538335exon_skip_433210chr4:177436275-177436351-9.35-0.1299AGAENST00000264595Frame-shift
ENSG00000212694ENST00000538335exon_skip_436035chr5:79656957-79657001-10.85-0.3191TENT2ENST00000296783,ENST00000428308,ENST00000453514Frame-shift
ENSG00000212694ENST00000538335exon_skip_442657chr5:74730259-74730398-17.53-0.1970GFM2ENST00000296805,ENST00000509430Frame-shift
ENSG00000212694ENST00000538335exon_skip_444499chr5:138164086-138164133-6.45-0.1697BRD8ENST00000254900Frame-shift
ENSG00000212694ENST00000538335exon_skip_462144chr6:125298713-125298816-13.64-0.1451HDDC2ENST00000398153Frame-shift
ENSG00000212694ENST00000538335exon_skip_494079chr8:144099080-144099205-23.99-0.1983SHARPINENST00000398712Frame-shift
ENSG00000212694ENST00000538335exon_skip_511212chrX:71555189-71555385-24.07-0.1234OGTENST00000373719Frame-shift
ENSG00000212694ENST00000538335exon_skip_11029chr1:154989559-154989707-21.59-0.2159FLAD1ENST00000292180Frame-shift
ENSG00000212694ENST00000538335exon_skip_153380chr17:45137018-45137139-20.82-0.2061ACBD4ENST00000376955Frame-shift
ENSG00000212694ENST00000538335exon_skip_371367chr3:9697710-9697866-22.71-0.1534MTMR14ENST00000296003In-frame
ENSG00000212694ENST00000538335exon_skip_374581chr3:50110378-50110463-19.90-0.2843RBM5ENST00000347869Frame-shift
ENSG00000212694ENST00000538335exon_skip_52671chr10:97461495-97461622-17.60-0.2411MMS19ENST00000370782,ENST00000438925Frame-shift
ENSG00000212694ENST00000538335exon_skip_5818chr1:45568484-45568684-27.47-0.1431AKR1A1ENST00000351829,ENST00000372070Frame-shift
ENSG00000212694ENST00000429892exon_skip_137309chr16:66558189-66558348-12.54-0.1072CKLFENST00000264001In-frame

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for LINC01089

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types
ENSG00000212694ENSG00000126456IRF3ENSG00000150316CWC155CHOL,KICH,LIHC,PRAD,THCA
ENSG00000212694ENSG00000099326MZF1ENSG00000084072PPIE5CHOL,KICH,KIRP,LIHC,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000084072PPIE7CHOL,KICH,KIRP,LIHC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000084072PPIE7CHOL,KIRP,LIHC,PAAD,PRAD,THCA,THYM
ENSG00000212694ENSG00000126456IRF3ENSG00000084072PPIE6CHOL,KICH,KIRP,LIHC,PRAD,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000084072PPIE6CHOL,KIRP,LIHC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000166987MBD6ENSG00000272333KMT2B8BLCA,COAD,KIRC,LAML,LUAD,LUSC,PAAD,PCPG
ENSG00000212694ENSG00000065029ZNF76ENSG00000272333KMT2B6KIRC,LAML,LGG,LUAD,PAAD,PCPG
ENSG00000212694ENSG00000099326MZF1ENSG00000272333KMT2B9BLCA,COAD,KIRC,LAML,LGG,LUAD,LUSC,PAAD,PCPG
ENSG00000212694ENSG00000104885DOT1LENSG00000272333KMT2B6CHOL,KIRC,LAML,LGG,LUAD,PAAD
ENSG00000212694ENSG00000141644MBD1ENSG00000272333KMT2B6CHOL,KIRC,LAML,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000154832CXXC1ENSG00000272333KMT2B8BLCA,KIRC,LAML,LGG,LUAD,LUSC,PAAD,PCPG
ENSG00000212694ENSG00000167766ZNF83ENSG00000272333KMT2B6BLCA,CHOL,KIRC,LGG,PAAD,PCPG
ENSG00000212694ENSG00000167967E4F1ENSG00000272333KMT2B8BLCA,COAD,KIRC,LAML,LGG,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000198040ZNF84ENSG00000272333KMT2B5BLCA,KIRC,LUSC,PAAD,PCPG
ENSG00000212694ENSG00000089094KDM2BENSG00000272333KMT2B5KIRC,LAML,LGG,LUAD,PAAD
ENSG00000212694ENSG00000102878HSF4ENSG00000272333KMT2B6COAD,KIRC,LAML,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000120798NR2C1ENSG00000272333KMT2B5BLCA,KIRC,LGG,PAAD,PCPG
ENSG00000212694ENSG00000141258SGSM2ENSG00000272333KMT2B6BLCA,KIRC,LAML,LUAD,PAAD,PCPG
ENSG00000212694ENSG00000065029ZNF76ENSG00000112592TBP5CHOL,KIRC,LGG,LIHC,LUSC
ENSG00000212694ENSG00000154832CXXC1ENSG00000112592TBP5CHOL,KIRC,LGG,LIHC,LUSC
ENSG00000212694ENSG00000198040ZNF84ENSG00000112592TBP5CHOL,KIRC,LGG,LIHC,LUSC
ENSG00000212694ENSG00000236287ZBED5ENSG00000112592TBP5CHOL,KIRC,LGG,LIHC,LUSC
ENSG00000212694ENSG00000272333KMT2BENSG00000100201DDX175BLCA,KIRC,LGG,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000100201DDX177CHOL,KIRC,KIRP,LIHC,LUSC,PAAD,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000100201DDX178CHOL,KIRC,KIRP,LAML,LGG,LIHC,LUSC,PAAD
ENSG00000212694ENSG00000099326MZF1ENSG00000100201DDX1714BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,SARC,SKCM,STAD,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000100201DDX176CHOL,KIRC,KIRP,LGG,LIHC,PAAD
ENSG00000212694ENSG00000126804ZBTB1ENSG00000100201DDX175CHOL,KIRP,SKCM,STAD,UCS
ENSG00000212694ENSG00000142065ZFP14ENSG00000100201DDX175CHOL,LUSC,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000100201DDX178BLCA,CHOL,KIRC,KIRP,LGG,LUAD,SKCM,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000100201DDX178CHOL,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000100201DDX1710BRCA,CHOL,KIRC,KIRP,LGG,LUAD,PAAD,SARC,THCA,UCS
ENSG00000212694ENSG00000167766ZNF83ENSG00000100201DDX1713BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SARC,SKCM,THCA
ENSG00000212694ENSG00000196378ZNF34ENSG00000100201DDX175CHOL,KIRC,KIRP,LGG,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000100201DDX1715BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SARC,SKCM,STAD,THCA,UCS
ENSG00000212694ENSG00000198521ZNF43ENSG00000100201DDX175BLCA,KIRP,PAAD,SARC,SKCM
ENSG00000212694ENSG00000089094KDM2BENSG00000100201DDX176CHOL,KIRC,LGG,PAAD,STAD,UCS
ENSG00000212694ENSG00000112511PHF1ENSG00000100201DDX175CHOL,KIRC,KIRP,LGG,PAAD
ENSG00000212694ENSG00000166526ZNF3ENSG00000100201DDX177BLCA,CHOL,KIRC,KIRP,LIHC,SARC,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000100201DDX1713BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SARC,SKCM,THCA,UCS
ENSG00000212694ENSG00000141258SGSM2ENSG00000100201DDX1710BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000100201DDX1711BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SKCM,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000100201DDX178BLCA,CHOL,KIRP,LIHC,LUAD,PAAD,SARC,STAD
ENSG00000212694ENSG00000272333KMT2BENSG00000106459NRF16BLCA,KIRC,LGG,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000106459NRF18CHOL,KIRC,KIRP,LIHC,LUSC,MESO,PAAD,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000106459NRF110BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LIHC,LUSC,MESO,PAAD
ENSG00000212694ENSG00000099326MZF1ENSG00000106459NRF113BRCA,CHOL,KICH,KIRC,KIRP,LGG,LIHC,LUAD,MESO,OV,PAAD,SARC,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000106459NRF110BRCA,CHOL,KICH,KIRC,KIRP,LGG,LIHC,LUAD,OV,PAAD
ENSG00000212694ENSG00000141644MBD1ENSG00000106459NRF15CHOL,KIRC,KIRP,LUSC,PAAD
ENSG00000212694ENSG00000142065ZFP14ENSG00000106459NRF15CHOL,LUSC,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000106459NRF18BLCA,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000106459NRF113BLCA,BRCA,CESC,CHOL,KICH,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PCPG,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000106459NRF15CHOL,KIRP,LUSC,PAAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000106459NRF19BRCA,CHOL,KIRC,KIRP,LGG,PAAD,PCPG,THCA,UCS
ENSG00000212694ENSG00000167766ZNF83ENSG00000106459NRF111BLCA,BRCA,CHOL,KICH,KIRC,KIRP,LGG,LIHC,LUAD,SARC,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000106459NRF111BLCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUSC,MESO,SARC,THCA
ENSG00000212694ENSG00000180035ZNF48ENSG00000106459NRF15CHOL,LGG,LIHC,LUSC,PAAD
ENSG00000212694ENSG00000196378ZNF34ENSG00000106459NRF17CHOL,KIRC,KIRP,LGG,PAAD,PCPG,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000106459NRF118BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,SARC,SKCM,THCA,UCS
ENSG00000212694ENSG00000198521ZNF43ENSG00000106459NRF15BLCA,KIRP,MESO,PAAD,SKCM
ENSG00000212694ENSG00000089094KDM2BENSG00000106459NRF110CESC,CHOL,KIRC,LGG,LUAD,LUSC,MESO,OV,PAAD,SKCM
ENSG00000212694ENSG00000112511PHF1ENSG00000106459NRF17BRCA,CHOL,KICH,KIRC,KIRP,LIHC,PAAD
ENSG00000212694ENSG00000166526ZNF3ENSG00000106459NRF110BLCA,CESC,CHOL,KIRC,KIRP,LIHC,LUSC,MESO,SARC,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000106459NRF114BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,THCA,THYM
ENSG00000212694ENSG00000126456IRF3ENSG00000106459NRF16CHOL,KICH,KIRC,KIRP,LIHC,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000106459NRF17BRCA,CHOL,KIRC,KIRP,LIHC,LUSC,PAAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000106459NRF112CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SKCM,THCA,THYM,UCS
ENSG00000212694ENSG00000185670ZBTB3ENSG00000106459NRF18CHOL,KIRP,LIHC,MESO,PAAD,SARC,THCA,THYM
ENSG00000212694ENSG00000272333KMT2BENSG00000099326MZF18BLCA,COAD,KIRC,LAML,LGG,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000099326MZF114BLCA,BRCA,CHOL,COAD,KIRC,KIRP,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000099326MZF114BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD
ENSG00000212694ENSG00000104885DOT1LENSG00000099326MZF111BRCA,CHOL,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,OV,PAAD
ENSG00000212694ENSG00000141644MBD1ENSG00000099326MZF16CHOL,KIRC,KIRP,LAML,LUAD,PAAD
ENSG00000212694ENSG00000142065ZFP14ENSG00000099326MZF16CESC,CHOL,ESCA,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000099326MZF17CHOL,KIRC,KIRP,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000099326MZF116BLCA,BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000099326MZF19BLCA,CHOL,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000099326MZF111BRCA,CHOL,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,SARC,THCA
ENSG00000212694ENSG00000167766ZNF83ENSG00000099326MZF117BLCA,BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,SARC,SKCM,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000099326MZF119BLCA,BRCA,CHOL,COAD,DLBC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000180035ZNF48ENSG00000099326MZF15CHOL,LAML,LIHC,PAAD,PRAD
ENSG00000212694ENSG00000196378ZNF34ENSG00000099326MZF16CHOL,KIRC,KIRP,PAAD,PCPG,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000099326MZF117BLCA,CESC,CHOL,DLBC,ESCA,KIRC,KIRP,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD,SARC,SKCM,THCA
ENSG00000212694ENSG00000112511PHF1ENSG00000099326MZF110BRCA,CHOL,KICH,KIRC,KIRP,LIHC,LUAD,PAAD,PCPG,TGCT
ENSG00000212694ENSG00000166526ZNF3ENSG00000099326MZF17BLCA,CHOL,KIRC,KIRP,LIHC,SARC,THCA
ENSG00000212694ENSG00000102878HSF4ENSG00000099326MZF117BLCA,BRCA,CESC,COAD,DLBC,KICH,KIRC,KIRP,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000099326MZF112BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,MESO,PAAD,PCPG,SKCM,THCA
ENSG00000212694ENSG00000126456IRF3ENSG00000099326MZF114BLCA,BRCA,CHOL,COAD,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PCPG,PRAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000099326MZF113BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD,PRAD,TGCT
ENSG00000212694ENSG00000205250E2F4ENSG00000099326MZF15CHOL,KIRC,LAML,LGG,LIHC
ENSG00000212694ENSG00000236287ZBED5ENSG00000099326MZF19BLCA,CHOL,DLBC,KIRC,KIRP,LIHC,LUAD,SKCM,THCA
ENSG00000212694ENSG00000272333KMT2BENSG00000175727MLXIP5KIRC,LAML,LGG,LUAD,PAAD
ENSG00000212694ENSG00000099326MZF1ENSG00000175727MLXIP5CHOL,KIRC,KIRP,LAML,LUAD
ENSG00000212694ENSG00000104885DOT1LENSG00000175727MLXIP8CHOL,KIRC,KIRP,LAML,LGG,LUAD,OV,PAAD
ENSG00000212694ENSG00000198040ZNF84ENSG00000175727MLXIP7CESC,CHOL,KIRP,LGG,LUAD,OV,PAAD
ENSG00000212694ENSG00000089094KDM2BENSG00000175727MLXIP7CHOL,KIRC,LAML,LGG,LUAD,OV,PAAD
ENSG00000212694ENSG00000120798NR2C1ENSG00000175727MLXIP5CHOL,KIRC,KIRP,LGG,OV
ENSG00000212694ENSG00000166987MBD6ENSG00000154957ZNF185CHOL,KIRC,KIRP,LUSC,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000154957ZNF186BLCA,CHOL,KIRC,KIRP,PAAD,PCPG
ENSG00000212694ENSG00000099326MZF1ENSG00000154957ZNF189BLCA,CHOL,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,THCA
ENSG00000212694ENSG00000147789ZNF7ENSG00000154957ZNF185CHOL,ESCA,KIRC,KIRP,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000154957ZNF186CHOL,KIRC,KIRP,PAAD,PCPG,THCA
ENSG00000212694ENSG00000167766ZNF83ENSG00000154957ZNF185CHOL,KIRC,KIRP,LUAD,PCPG
ENSG00000212694ENSG00000198040ZNF84ENSG00000154957ZNF185BLCA,CHOL,KIRP,PAAD,THCA
ENSG00000212694ENSG00000102878HSF4ENSG00000154957ZNF185ESCA,KIRC,KIRP,LUAD,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000154957ZNF186BLCA,CHOL,KIRC,KIRP,PCPG,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000154957ZNF187BLCA,CHOL,KIRC,KIRP,LUAD,PAAD,PCPG
ENSG00000212694ENSG00000236287ZBED5ENSG00000154957ZNF186BLCA,CHOL,KIRC,KIRP,PAAD,THCA
ENSG00000212694ENSG00000166987MBD6ENSG00000003756RBM510BRCA,CHOL,KIRC,KIRP,LIHC,LUSC,OV,PAAD,PCPG,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000003756RBM512BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PCPG,PRAD
ENSG00000212694ENSG00000099326MZF1ENSG00000003756RBM520BLCA,BRCA,CESC,CHOL,COAD,DLBC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,STAD,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000003756RBM58CHOL,GBM,KIRC,KIRP,LGG,LIHC,OV,PAAD
ENSG00000212694ENSG00000126804ZBTB1ENSG00000003756RBM55CHOL,KIRP,SKCM,STAD,UCS
ENSG00000212694ENSG00000142065ZFP14ENSG00000003756RBM55CESC,CHOL,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000003756RBM511ACC,BLCA,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000003756RBM512BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000003756RBM57CHOL,DLBC,KIRC,KIRP,LUAD,PAAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000003756RBM512BRCA,CHOL,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,SARC,THCA,UCS
ENSG00000212694ENSG00000167766ZNF83ENSG00000003756RBM519ACC,BLCA,BRCA,CHOL,DLBC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,READ,SARC,SKCM,THCA,UCEC
ENSG00000212694ENSG00000167967E4F1ENSG00000003756RBM513BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PRAD,SARC,THCA
ENSG00000212694ENSG00000196378ZNF34ENSG00000003756RBM58ACC,CHOL,KIRC,KIRP,LGG,PAAD,PCPG,THCA
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ENSG00000212694ENSG00000154832CXXC1ENSG00000122965RBM1910BRCA,CHOL,KIRC,LAML,LGG,LIHC,LUAD,PAAD,PRAD,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000122965RBM195CHOL,ESCA,KIRC,KIRP,PAAD
ENSG00000212694ENSG00000167967E4F1ENSG00000122965RBM1912BRCA,CHOL,KIRC,KIRP,LAML,LGG,LIHC,LUAD,OV,PAAD,PRAD,THCA
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ENSG00000212694ENSG00000089094KDM2BENSG00000122965RBM199CHOL,ESCA,KIRC,LAML,LGG,LUAD,OV,PAAD,UCS
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ENSG00000212694ENSG00000120798NR2C1ENSG00000122965RBM199CHOL,KIRC,KIRP,LGG,LIHC,OV,PAAD,THCA,UCS
ENSG00000212694ENSG00000141258SGSM2ENSG00000122965RBM197BRCA,CHOL,KIRC,KIRP,LAML,PAAD,PRAD
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ENSG00000212694ENSG00000272333KMT2BENSG00000167766ZNF835BLCA,CHOL,KIRC,LGG,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000167766ZNF838BRCA,CHOL,KIRC,KIRP,LIHC,PAAD,PCPG,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000167766ZNF8310BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PCPG,PRAD
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ENSG00000212694ENSG00000104885DOT1LENSG00000167766ZNF836CHOL,KIRC,KIRP,LGG,LIHC,PAAD
ENSG00000212694ENSG00000147789ZNF7ENSG00000167766ZNF839CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000167766ZNF835CHOL,KIRC,KIRP,LUAD,PCPG
ENSG00000212694ENSG00000166432ZMAT1ENSG00000167766ZNF8312BRCA,CHOL,KICH,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,SARC,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000167766ZNF8311BLCA,CHOL,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,PRAD,SARC,THCA
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ENSG00000212694ENSG00000112511PHF1ENSG00000167766ZNF837CHOL,KICH,KIRC,KIRP,LIHC,PAAD,PCPG
ENSG00000212694ENSG00000166526ZNF3ENSG00000167766ZNF836BLCA,CHOL,DLBC,KIRC,KIRP,SARC
ENSG00000212694ENSG00000102878HSF4ENSG00000167766ZNF8313ACC,BLCA,KIRC,KIRP,LGG,LUSC,PAAD,PCPG,PRAD,READ,SARC,THCA,UCEC
ENSG00000212694ENSG00000120798NR2C1ENSG00000167766ZNF8314ACC,BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,SARC,SKCM,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000167766ZNF839BLCA,BRCA,CHOL,KIRC,KIRP,LIHC,LUAD,LUSC,PRAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000167766ZNF8311BLCA,CHOL,DLBC,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,SKCM,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000167766ZNF835CHOL,DLBC,KIRP,LIHC,SARC
ENSG00000212694ENSG00000272333KMT2BENSG00000004534RBM67BLCA,COAD,KIRC,LGG,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000004534RBM610BRCA,COAD,KIRC,KIRP,LIHC,LUSC,OV,PAAD,PCPG,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000004534RBM614BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,PAAD,PCPG,PRAD
ENSG00000212694ENSG00000099326MZF1ENSG00000004534RBM620BLCA,BRCA,CESC,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,STAD,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000004534RBM68GBM,KIRC,KIRP,LGG,LIHC,LUAD,OV,PAAD
ENSG00000212694ENSG00000141644MBD1ENSG00000004534RBM65CHOL,KIRC,KIRP,LUAD,PAAD
ENSG00000212694ENSG00000142065ZFP14ENSG00000004534RBM66CESC,CHOL,LUSC,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000004534RBM610ACC,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000004534RBM615BLCA,BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000004534RBM68ACC,BLCA,CHOL,KIRC,KIRP,LUAD,PAAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000004534RBM613BRCA,CHOL,KICH,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,SARC,THCA,UCS
ENSG00000212694ENSG00000167766ZNF83ENSG00000004534RBM619ACC,BLCA,BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,SARC,SKCM,THCA,UCEC
ENSG00000212694ENSG00000167967E4F1ENSG00000004534RBM616BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SARC,THCA
ENSG00000212694ENSG00000196378ZNF34ENSG00000004534RBM67ACC,CHOL,KIRC,KIRP,LGG,PCPG,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000004534RBM620BLCA,BRCA,CESC,CHOL,GBM,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,STAD,THCA,UCS
ENSG00000212694ENSG00000089094KDM2BENSG00000004534RBM68CHOL,KIRC,LGG,LUAD,OV,PAAD,SKCM,STAD
ENSG00000212694ENSG00000112511PHF1ENSG00000004534RBM69BRCA,CHOL,DLBC,KIRC,KIRP,LGG,LIHC,LUAD,PAAD
ENSG00000212694ENSG00000166526ZNF3ENSG00000004534RBM66CESC,CHOL,KIRC,KIRP,LIHC,THCA
ENSG00000212694ENSG00000102878HSF4ENSG00000004534RBM620ACC,BLCA,BRCA,COAD,DLBC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,SARC,SKCM,THCA,UCEC
ENSG00000212694ENSG00000120798NR2C1ENSG00000004534RBM615ACC,BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,SKCM,STAD,THCA,THYM
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ENSG00000212694ENSG00000141258SGSM2ENSG00000004534RBM612ACC,BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LIHC,LUAD,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000004534RBM614ACC,BLCA,CHOL,DLBC,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SKCM,THCA,THYM
ENSG00000212694ENSG00000185670ZBTB3ENSG00000004534RBM610CHOL,DLBC,KIRP,LGG,LIHC,LUAD,PAAD,PRAD,SARC,THYM
ENSG00000212694ENSG00000099326MZF1ENSG00000176182MYPOP8CHOL,KIRC,KIRP,LAML,LIHC,PAAD,PCPG,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000176182MYPOP6CHOL,KIRP,LAML,LIHC,PAAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000176182MYPOP9CHOL,KIRC,KIRP,LAML,LIHC,PAAD,PCPG,THCA,THYM
ENSG00000212694ENSG00000112511PHF1ENSG00000176182MYPOP6CHOL,KIRP,LAML,LIHC,PAAD,PCPG
ENSG00000212694ENSG00000126456IRF3ENSG00000176182MYPOP7CHOL,KIRC,KIRP,LAML,LIHC,PCPG,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000176182MYPOP5CHOL,KIRC,LAML,LIHC,PAAD
ENSG00000212694ENSG00000099326MZF1ENSG00000143486EIF2D5CHOL,LAML,LGG,SARC,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000180787ZFP35CESC,CHOL,KIRP,LUSC,PAAD
ENSG00000212694ENSG00000141258SGSM2ENSG00000180787ZFP35CESC,CHOL,KIRP,LUSC,PAAD
ENSG00000212694ENSG00000167766ZNF83ENSG00000134698AGO45BLCA,KIRC,KIRP,LUSC,SKCM
ENSG00000212694ENSG00000198040ZNF84ENSG00000134698AGO48BLCA,ESCA,KIRC,KIRP,LUSC,SKCM,STAD,UCS
ENSG00000212694ENSG00000120798NR2C1ENSG00000134698AGO46BLCA,KIRC,KIRP,LUSC,SKCM,UCS
ENSG00000212694ENSG00000141258SGSM2ENSG00000134698AGO45BLCA,ESCA,KIRC,KIRP,LUSC
ENSG00000212694ENSG00000236287ZBED5ENSG00000134698AGO45BLCA,KIRC,KIRP,SKCM,UCS
ENSG00000212694ENSG00000272333KMT2BENSG00000197114ZGPAT8BLCA,COAD,KIRC,LAML,LGG,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000197114ZGPAT7COAD,KIRC,LAML,LUAD,LUSC,PAAD,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000197114ZGPAT11BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000099326MZF1ENSG00000197114ZGPAT13BLCA,BRCA,COAD,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD,SKCM,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000197114ZGPAT7BRCA,KIRC,KIRP,LAML,LGG,LUAD,PAAD
ENSG00000212694ENSG00000141644MBD1ENSG00000197114ZGPAT5KIRC,LAML,LUAD,LUSC,PAAD
ENSG00000212694ENSG00000154832CXXC1ENSG00000197114ZGPAT11BRCA,CHOL,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000197114ZGPAT5CHOL,KIRC,KIRP,LUAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000197114ZGPAT6CHOL,KIRC,KIRP,LGG,PRAD,THCA
ENSG00000212694ENSG00000167766ZNF83ENSG00000197114ZGPAT7KIRC,KIRP,LGG,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000197114ZGPAT14BLCA,BRCA,CHOL,COAD,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD,SKCM,THCA
ENSG00000212694ENSG00000112511PHF1ENSG00000197114ZGPAT7BRCA,CHOL,KIRC,LAML,LGG,LUAD,PAAD
ENSG00000212694ENSG00000102878HSF4ENSG00000197114ZGPAT12BLCA,BRCA,COAD,KIRC,KIRP,LAML,LGG,LUAD,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000197114ZGPAT8BLCA,CHOL,KIRC,KIRP,LGG,LUSC,PAAD,THCA
ENSG00000212694ENSG00000126456IRF3ENSG00000197114ZGPAT10BLCA,BRCA,CHOL,COAD,KIRC,LAML,LUAD,LUSC,PRAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000197114ZGPAT10BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LUAD,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000197114ZGPAT5BLCA,CHOL,LGG,PAAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000105717PBX47BLCA,CHOL,COAD,KIRP,LUAD,READ,THYM
ENSG00000212694ENSG00000102878HSF4ENSG00000105717PBX45BLCA,COAD,KIRP,LUAD,READ
ENSG00000212694ENSG00000126456IRF3ENSG00000105717PBX45BLCA,CHOL,COAD,KIRP,LUAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000105717PBX45BLCA,CHOL,KIRP,LUAD,THYM
ENSG00000212694ENSG00000272333KMT2BENSG00000131051RBM396BLCA,CHOL,KIRC,LGG,LUSC,PAAD
ENSG00000212694ENSG00000166987MBD6ENSG00000131051RBM3911BLCA,BRCA,CHOL,KIRC,KIRP,LIHC,LUSC,OV,PAAD,PCPG,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000131051RBM3911BLCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUSC,PAAD,PCPG,PRAD
ENSG00000212694ENSG00000099326MZF1ENSG00000131051RBM3917BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,STAD,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000131051RBM397CHOL,KIRC,KIRP,LGG,LIHC,OV,PAAD
ENSG00000212694ENSG00000142065ZFP14ENSG00000131051RBM396CESC,CHOL,LUSC,PAAD,SARC,SKCM
ENSG00000212694ENSG00000147789ZNF7ENSG00000131051RBM3910BLCA,CHOL,KIRC,KIRP,LGG,LUAD,PCPG,PRAD,SKCM,THCA
ENSG00000212694ENSG00000154957ZNF18ENSG00000131051RBM396CHOL,KIRC,KIRP,LUSC,PAAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000131051RBM3912BRCA,CHOL,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,SARC,THCA,UCS
ENSG00000212694ENSG00000167766ZNF83ENSG00000131051RBM3915BLCA,BRCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,PCPG,PRAD,SARC,SKCM,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000131051RBM3910BLCA,CHOL,KIRC,KIRP,LGG,LUSC,PAAD,PRAD,SARC,THCA
ENSG00000212694ENSG00000196378ZNF34ENSG00000131051RBM396CHOL,KIRC,KIRP,LGG,PCPG,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000131051RBM3919BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,PRAD,SARC,SKCM,STAD,THCA,UCS
ENSG00000212694ENSG00000089094KDM2BENSG00000131051RBM396CHOL,KIRC,LGG,LUAD,OV,PAAD
ENSG00000212694ENSG00000112511PHF1ENSG00000131051RBM396CHOL,KIRC,KIRP,LGG,LIHC,PAAD
ENSG00000212694ENSG00000166526ZNF3ENSG00000131051RBM398BLCA,CHOL,KIRC,KIRP,LIHC,LUSC,SARC,THCA
ENSG00000212694ENSG00000102878HSF4ENSG00000131051RBM399BLCA,CESC,KIRC,KIRP,LGG,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000120798NR2C1ENSG00000131051RBM3915BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,OV,PAAD,PCPG,SARC,SKCM,STAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000131051RBM3910BLCA,BRCA,CESC,CHOL,KIRC,KIRP,LIHC,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000131051RBM3911BLCA,CHOL,KIRC,KIRP,LGG,LIHC,LUAD,LUSC,PAAD,SKCM,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000131051RBM395BLCA,CHOL,KIRP,LIHC,PAAD
ENSG00000212694ENSG00000125817CENPBENSG00000041988THAP35CHOL,KIRP,LIHC,MESO,PAAD
ENSG00000212694ENSG00000154832CXXC1ENSG00000041988THAP39BRCA,CHOL,KIRP,LAML,LGG,LIHC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000041988THAP312BLCA,BRCA,CHOL,KIRP,LAML,LGG,LIHC,MESO,PAAD,PRAD,THCA,THYM
ENSG00000212694ENSG00000180035ZNF48ENSG00000041988THAP36CHOL,LAML,LGG,LIHC,PAAD,PRAD
ENSG00000212694ENSG00000112511PHF1ENSG00000041988THAP36BRCA,CHOL,KIRP,LAML,LIHC,PAAD
ENSG00000212694ENSG00000102878HSF4ENSG00000041988THAP37BRCA,KIRP,LAML,LIHC,MESO,PRAD,THCA
ENSG00000212694ENSG00000126456IRF3ENSG00000041988THAP38BLCA,BRCA,CHOL,KIRP,LAML,LIHC,PRAD,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000041988THAP37BLCA,CHOL,KIRP,LIHC,MESO,PAAD,THYM
ENSG00000212694ENSG00000065029ZNF76ENSG00000090097PCBP46CHOL,KIRP,LGG,LIHC,PAAD,PCPG
ENSG00000212694ENSG00000099326MZF1ENSG00000090097PCBP48CHOL,KIRC,KIRP,LIHC,PAAD,PCPG,TGCT,THCA
ENSG00000212694ENSG00000112511PHF1ENSG00000090097PCBP47CHOL,DLBC,KIRP,LGG,LIHC,PAAD,PCPG
ENSG00000212694ENSG00000102878HSF4ENSG00000090097PCBP45KIRP,LGG,PCPG,PRAD,THCA
ENSG00000212694ENSG00000126456IRF3ENSG00000090097PCBP46CHOL,KIRC,KIRP,LIHC,PRAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000090097PCBP45CHOL,KIRC,KIRP,LIHC,TGCT
ENSG00000212694ENSG00000099326MZF1ENSG00000126456IRF314BLCA,BRCA,CHOL,COAD,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PCPG,PRAD,THCA
ENSG00000212694ENSG00000154832CXXC1ENSG00000126456IRF312BRCA,CHOL,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PCPG,PRAD,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000126456IRF315BLCA,BRCA,CHOL,COAD,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PCPG,PRAD,THCA,THYM
ENSG00000212694ENSG00000112511PHF1ENSG00000126456IRF38BRCA,CHOL,KICH,KIRC,KIRP,LAML,LIHC,LUAD
ENSG00000212694ENSG00000102878HSF4ENSG00000126456IRF312BLCA,BRCA,COAD,KICH,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PRAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000126456IRF37CHOL,KIRC,KIRP,LAML,LUAD,LUSC,PRAD
ENSG00000212694ENSG00000166987MBD6ENSG00000099622CIRBP5BRCA,CHOL,LAML,LIHC,THCA
ENSG00000212694ENSG00000065029ZNF76ENSG00000099622CIRBP11BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LGG,LIHC,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000099326MZF1ENSG00000099622CIRBP15BLCA,BRCA,CHOL,KICH,KIRC,KIRP,LAML,LIHC,LUAD,MESO,PAAD,PRAD,SARC,SKCM,THCA
ENSG00000212694ENSG00000104885DOT1LENSG00000099622CIRBP7CHOL,KIRC,KIRP,LGG,LIHC,LUAD,OV
ENSG00000212694ENSG00000141644MBD1ENSG00000099622CIRBP5CHOL,KIRC,KIRP,LAML,PAAD
ENSG00000212694ENSG00000154832CXXC1ENSG00000099622CIRBP11BLCA,BRCA,CHOL,KIRC,KIRP,LAML,LGG,LUSC,PAAD,PRAD,THCA
ENSG00000212694ENSG00000166432ZMAT1ENSG00000099622CIRBP10BRCA,CHOL,KICH,KIRC,KIRP,LGG,LUAD,PAAD,SARC,THCA
ENSG00000212694ENSG00000167967E4F1ENSG00000099622CIRBP10BLCA,BRCA,CHOL,DLBC,KIRP,LAML,LGG,PAAD,PRAD,THCA
ENSG00000212694ENSG00000198040ZNF84ENSG00000099622CIRBP7CHOL,KIRP,LGG,LIHC,PAAD,SARC,THCA
ENSG00000212694ENSG00000112511PHF1ENSG00000099622CIRBP11BRCA,CHOL,DLBC,KICH,KIRC,KIRP,LAML,LGG,LIHC,LUAD,PAAD
ENSG00000212694ENSG00000166526ZNF3ENSG00000099622CIRBP6BLCA,CHOL,KICH,KIRP,LIHC,THCA
ENSG00000212694ENSG00000102878HSF4ENSG00000099622CIRBP8BRCA,KIRC,KIRP,LGG,LUAD,MESO,PRAD,THCA
ENSG00000212694ENSG00000126456IRF3ENSG00000099622CIRBP7CHOL,DLBC,KIRP,LAML,LIHC,PRAD,THCA
ENSG00000212694ENSG00000141258SGSM2ENSG00000099622CIRBP12BLCA,BRCA,CHOL,ESCA,KIRC,KIRP,LAML,LIHC,LUAD,LUSC,PAAD,PRAD
ENSG00000212694ENSG00000236287ZBED5ENSG00000099622CIRBP7BLCA,CHOL,KIRC,KIRP,LGG,LIHC,THCA
ENSG00000212694ENSG00000185670ZBTB3ENSG00000099622CIRBP12BLCA,CHOL,KIRP,LGG,LIHC,LUAD,MESO,PAAD,PRAD,SARC,STAD,THCA

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA-RBP complex negative regulation
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type
ENSG00000212694ENSG00000003756RBM5exon_skip_66482ENSG00000110074:chr11:126274926-126275021FOXRED1ENST00000263578Frame-shiftSARC,SKCM,OV,PAAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_111863ENSG00000213983:chr14:23565815-23565892AP1G2ENST00000308724,ENST00000397120Frame-shiftSARC,UVM,READ,OV,THCA
ENSG00000212694ENSG00000111364DDX55exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,UVM,SKCM,READ,OV,PAAD,THCA
ENSG00000212694ENSG00000089280FUSexon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,OV,MESO,PRAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,STAD,UVM,SKCM,OV,PRAD,PCPG,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,STAD,UVM,SKCM,OV,MESO,PRAD,UCS,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000105705SUGP1exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,READ,PCPG,PAAD,THCA
ENSG00000212694ENSG00000163728TTC14exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,STAD,UVM,SKCM,OV,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,STAD,UVM,SKCM,MESO,PRAD,UCS,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000100650SRSF5exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftUVM,SKCM,OV,PAAD,THCA
ENSG00000212694ENSG00000124193SRSF6exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSARC,UVM,SKCM,MESO,UCS,PAAD,THCA
ENSG00000212694ENSG00000139746RBM26exon_skip_382458ENSG00000060971:chr3:38131595-38131638ACAA1ENST00000333167Frame-shiftSTAD,UVM,SKCM,PAAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_470226ENSG00000105819:chr7:103307595-103307708PMPCBENST00000249269Frame-shiftUVM,SKCM,PRAD,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_470226ENSG00000105819:chr7:103307595-103307708PMPCBENST00000249269Frame-shiftUVM,SKCM,LIHC,PRAD,UCS,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_470226ENSG00000105819:chr7:103307595-103307708PMPCBENST00000249269Frame-shiftUVM,SKCM,LIHC,PRAD,UCS,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000124193SRSF6exon_skip_470226ENSG00000105819:chr7:103307595-103307708PMPCBENST00000249269Frame-shiftUVM,SKCM,UCS,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_41813ENSG00000096746:chr10:68337857-68337996HNRNPH3ENST00000265866Frame-shiftSTAD,UVM,SKCM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_41813ENSG00000096746:chr10:68337857-68337996HNRNPH3ENST00000265866Frame-shiftUVM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftSTAD,UVM,SKCM,READ,PRAD,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftSTAD,UVM,SKCM,PRAD,THYM,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftUVM,SKCM,PRAD,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000100650SRSF5exon_skip_370518ENSG00000100429:chr22:50247691-50247776HDAC10ENST00000216271Frame-shiftUVM,SKCM,PRAD,PAAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_53559ENSG00000198408:chr10:101793912-101793998OGAENST00000361464Frame-shiftUVM,READ,PCPG,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_53559ENSG00000198408:chr10:101793912-101793998OGAENST00000361464Frame-shiftUVM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_53559ENSG00000198408:chr10:101793912-101793998OGAENST00000361464Frame-shiftUVM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000003756RBM5exon_skip_114365ENSG00000119688:chr14:74290026-74290118ABCD4ENST00000356924Frame-shiftUVM,SKCM,READ,PCPG,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_114365ENSG00000119688:chr14:74290026-74290118ABCD4ENST00000356924Frame-shiftUVM,SKCM,OV,PCPG,PAAD,THCA
ENSG00000212694ENSG00000100650SRSF5exon_skip_290158ENSG00000266967:chr17:42953723-42953778AARSD1ENST00000427569Frame-shiftSKCM,PRAD,UCS,PAAD,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_442657ENSG00000164347:chr5:74730259-74730398GFM2ENST00000296805,ENST00000509430Frame-shiftUVM,SKCM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_442657ENSG00000164347:chr5:74730259-74730398GFM2ENST00000296805,ENST00000509430Frame-shiftUVM,SKCM,THYM,PCPG,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_444499ENSG00000112983:chr5:138164086-138164133BRD8ENST00000254900Frame-shiftUVM,SKCM,THYM,PCPG,THCA
ENSG00000212694ENSG00000004534RBM6exon_skip_511212ENSG00000147162:chrX:71555189-71555385OGTENST00000373719Frame-shiftUVM,SKCM,THYM,PAAD,THCA
ENSG00000212694ENSG00000079134THOC1exon_skip_511212ENSG00000147162:chrX:71555189-71555385OGTENST00000373719Frame-shiftUVM,SKCM,THYM,PAAD,THCA

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000212694.7ENST00000542933.469538329
ENSG00000212694.7ENST00000429892.4139250669
ENSG00000212694.7ENST00000537157.495139426
ENSG00000212694.7ENST00000428029.57229247
ENSG00000212694.7ENST00000541694.4139427846
ENSG00000212694.7ENST00000543167.4114531872
ENSG00000212694.7ENST00000535643.498744448
ENSG00000212694.7ENST00000543334.488917651
ENSG00000212694.7ENST00000535614.498946650
ENSG00000212694.7ENST00000536662.412120385
ENSG00000212694.7ENST00000545885.470348557
ENSG00000212694.7ENST00000538335.168406200