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lncRNA: ENSG00000204528 |
Summary for PSORS1C3 |
Gene summary |
Gene information | Ensembl ID | ENSG00000204528 | Gene symbol | PSORS1C3 |
Gene name | psoriasis susceptibility 1 candidate 3 | |
HGNC | 17203 | |
Entrez ID | ||
Gene type | sense_intronic | |
Synonyms | PSORS1C3|06p21.33 | |
UniProtAcc |
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Structure and expression level for PSORS1C3 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000204528 | 7.155191e+01 | 2.071424e+00 | 5.843535e-01 | 3.544812e+00 | 3.928930e-04 | 1.503139e-03 | UP | CHOL |
ENSG00000204528 | 4.396864e+02 | 3.140959e+00 | 1.850751e-01 | 1.697127e+01 | 1.340000e-64 | 5.430000e-63 | UP | KIRC |
ENSG00000204528 | 3.763954e+01 | -1.885907e+00 | 4.450225e-01 | -4.237778e+00 | 2.260000e-05 | 7.120000e-05 | DOWN | KICH |
ENSG00000204528 | 1.062296e+02 | 2.098568e+00 | 5.539531e-01 | 3.788351e+00 | 1.516510e-04 | 7.511070e-04 | UP | BLCA |
ENSG00000204528 | 2.145009e+02 | 1.797917e+00 | 3.089247e-01 | 5.819921e+00 | 5.890000e-09 | 3.660000e-08 | UP | KIRP |
ENSG00000204528 | 6.236064e+01 | 1.410054e+00 | 3.809401e-01 | 3.701511e+00 | 2.143200e-04 | 6.250040e-04 | UP | UCEC |
ENSG00000204528 | 4.613243e+01 | 1.613474e+00 | 3.254955e-01 | 4.956976e+00 | 7.160000e-07 | 2.340000e-06 | UP | LUAD |
ENSG00000204528 | 9.961527e+01 | 1.896289e+00 | 3.246388e-01 | 5.841225e+00 | 5.180000e-09 | 5.390000e-08 | UP | STAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000204528 | 3.751102e-01 | 1.111798e-02 | CHOL | 1.293253e-02 |
ENSG00000204528 | -4.028602e-01 | 9.075430e-05 | KICH | 1.546469e-04 |
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lncRNA-Protein interaction for PSORS1C3 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000204528 | ENST00000412143 | PSORS1C3 | ENSG00000129566 | TEP1 | 27.11 | 93.1154 | Q99973 | RBP | NA |
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