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lncRNA: ENSG00000204282

Summary for TNRC6C-AS1

Gene summary

Gene information	Ensembl ID	ENSG00000204282
	Gene symbol	TNRC6C-AS1
	Gene name
	HGNC
	Entrez ID
	Gene type	processed_transcript
	Synonyms
	UniProtAcc

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Structure and expression level for TNRC6C-AS1

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000204282	2.163862e+02	-1.663538e+00	4.791294e-01	-3.472001e+00	5.165940e-04	2.110921e-03	DOWN	GBM
ENSG00000204282	1.381772e+03	2.527425e+00	1.564233e-01	1.615760e+01	1.000000e-58	1.350000e-56	UP	THCA
ENSG00000204282	5.928888e+02	1.017594e+00	2.383097e-01	4.270047e+00	1.950000e-05	1.253850e-04	UP	BLCA
ENSG00000204282	4.265179e+02	1.240792e+00	2.816637e-01	4.405225e+00	1.060000e-05	2.032360e-04	UP	ESCA

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000204282	5.661206e-01	5.051210e-05	CHOL	1.863188e-04

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lncRNA-Protein interaction for TNRC6C-AS1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000149311	ATM	99.22	94.285	Q13315	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000143442	POGZ	79.22	91.949	Q7Z3K3	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000135655	USP15	70.85	95.4679	Q9Y4E8	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000182979	MTA1	64.83	90.1152	Q13330	Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000135655	USP15	63.69	92.2101	Q9Y4E8	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000078487	ZCWPW1	55.57	92.055	Q9H0M4	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000174579	MSL2	24.46	91.7185	Q9HCI7	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000111653	ING4	16.83	90.0899	Q9UNL4	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000112511	PHF1	7.41	90.1658	O43189	TF,Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000155363	MOV10	101.24	92.8655	Q9HCE1	RBP,Epi	GSE70061;High-throughput data combine LncPro prediction
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000155363	MOV10	85.81	91.1795	Q9HCE1	RBP,Epi	GSE70061;High-throughput data combine LncPro prediction
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000108799	EZH1	73.66	93.3567	Q92800	Epi	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000173120	KDM2A	70.45	91.3514	Q9Y2K7	TF,Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000173120	KDM2A	57.73	90.9994	Q9Y2K7	TF,Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000057657	PRDM1	56.82	90.2883	O75626	TF,Epi	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000005302	MSL3	42.94	92.549	Q8N5Y2	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000100307	CBX7	34.01	90.9422	O95931	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000005302	MSL3	28.26	95.7326	Q8N5Y2	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000163517	HDAC11	28.07	91.3058	Q96DB2	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000172530	BANP	24.76	91.4797	Q8N9N5	Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000156860	FBRS	18.47	92.0715	Q9HAH7	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000156860	FBRS	12.82	94.1461	Q9HAH7	Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000119760	SUPT7L	4.95	91.2537	O94864	Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000135899	SP110	87.31	93.4033	Q9HB58	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000170581	STAT2	81.76	94.8868	P52630	TF	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000166888	STAT6	78.64	93.886	P42226	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000138378	STAT4	77.99	94.6553	Q14765	TF	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000236287	ZBED5	73.27	95.1118	Q49AG3	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000173120	KDM2A	70.45	91.2332	Q9Y2K7	TF,Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000166888	STAT6	67.95	91.4641	P42226	TF	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000170581	STAT2	64.17	92.1684	P52630	TF	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000141258	SGSM2	63.85	95.24	O43147	TF	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000138378	STAT4	61.83	91.9003	Q14765	TF	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000173120	KDM2A	57.73	92.8137	Q9Y2K7	TF,Epi	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000057657	PRDM1	56.82	90.7939	O75626	TF,Epi	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000141258	SGSM2	54.11	94.6634	O43147	TF	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000197857	ZNF44	53.25	90.6359	P15621	TF	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000128604	IRF5	46.18	91.6156	Q13568	TF	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000128604	IRF5	43.73	93.9891	Q13568	TF	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000197857	ZNF44	34.31	95.0434	P15621	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000112592	TBP	32.58	91.0792	P20226	TF	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000102878	HSF4	30.31	92.5243	Q9ULV5	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000168310	IRF2	30.02	91.7732	P14316	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000125347	IRF1	25.83	91.8395	P10914	TF	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000185507	IRF7	25.74	90.9376	Q92985	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000066336	SPI1	20.38	90.3055	P17947	TF,RBP	ChIP-seq
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000102878	HSF4	20.16	94.4531	Q9ULV5	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000185507	IRF7	19.32	91.5558	Q92985	TF	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000140968	IRF8	12.99	92.2531	Q02556	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000140968	IRF8	12.68	91.5237	Q02556	TF	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000112511	PHF1	7.41	90.289	O43189	TF,Epi	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000126456	IRF3	5.17	94.2364	Q14653	TF	ChIP-seq
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000126456	IRF3	4.54	90.4999	Q14653	TF	ChIP-seq

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000155363	MOV10	101.24	92.8102	Q9HCE1	RBP,Epi	GSE70061;High-throughput data combine LncPro prediction
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000155363	MOV10	85.81	91.1363	Q9HCE1	RBP,Epi	GSE70061;High-throughput data combine LncPro prediction
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000129566	TEP1	75.65	95.8787	Q99973	RBP	NA
ENSG00000204282	ENST00000589217	TNRC6C-AS1	ENSG00000139746	RBM26	72.02	95.4474	Q5T8P6	RBP	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000129566	TEP1	66.85	95.3953	Q99973	RBP	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000139746	RBM26	57.94	93.2832	Q5T8P6	RBP	NA
ENSG00000204282	ENST00000592939	TNRC6C-AS1	ENSG00000185946	RNPC3	20.55	90.0416	Q96LT9	RBP	NA

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lncRNA-DNA interaction for TNRC6C-AS1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

ARHGEF1,GSDMB,VAMP1,EPOR,TCEA2,ISG20,TNFRSF4,DUSP2,MFSD8,LTB,ABHD17A,TMEM234,ADAM19,BRD1,MAST3,CIRBP,MZF1,TTC31,ILDR1,RGS10,MAPK8IP3,HMCES,TAP2,N4BP2L2,DCLRE1C,MKNK1,DMTF1,ANKRD44,NUP62,FAM193A,UNKL,CD69,CALHM6,LMBR1L,GPCPD1,CLEC10A,RUBCNL,TRAPPC12,ULK3,KMT2B,IRAK4,STAT2,RFTN1,CENATAC,NPEPL1,SNRPA,TP53INP1,TMC8,SAFB2,KCTD13,MSANTD2,TUBGCP6,MREG,CCDC14,INF2,SPI1,CD27,EVPL,CLK4,GIMAP7,DENND1C,LCK,ZBED5,PRKD2,ATXN7L3,CD37,SPOCK2,ARHGAP40,TTC14,SLC37A1,MOB3A,SPRN,SUGP1,TAZ,SPG7,CD74,SRSF4,TMEM106A,PPP1R13L,MLKL,CLCN6,ECHDC2,OGT,CCR7,NOD1,COX19,POLD1,CLK2,KLRB1,GDPD5,ILKAP,FIG4,POLG2,DHX34,CHKB,METTL17,JAK3,FLI1,RAPGEF3,TRIM11,DHX58,MAP4K1,SEPTIN6,WDR83,OSGEP,USF1,CTC1,CLK1,IL12RB1,NASP,RABL2A,LLGL2,PAOX,OFD1,MOV10,CARS2,SLC48A1,ACYP1,SLC25A29,ADAM8,FCHSD1,TMEM243,CC2D1B,RBM38,SUN2,GZMM,ANO8,HGS,HSH2D,INO80E,HCLS1,C3orf62,APBA3,CBX7,MAP3K14,CCDC28A,EML4,SETD5,SAMSN1,DOCK10,FCER2,ITPKB,BIN2,HLA-DMA,ORMDL1,LPAR2,SH2D3A,DDX51,AGER,MBD4,NFAM1,SPOUT1,SRSF2,C1orf52,CUL9,CDK11A,POGLUT1,TECPR1,DOK3,SYMPK,FBXW4,PASK,TSEN54,LRRC37B,ATG4B,FYN,LMNTD2,CCDC191,NXF1,DCUN1D2,SLC2A6,SRCIN1,NR2C2,PAN2,BMF,SLFN13,IRAG2,IL27RA,PPP1R9B,CDKN2D,GIGYF1,PARP10,UNC13D,CD72,TMEM273,CCDC69,FAM193B,ABCA7,TMCO6,SLC25A28,CXCR3,PIK3C2B,GRK3,ZFC3H1,TAGAP,KLHL17,N4BP2L1,DNASE1,TMEM184A,HEXD,LPAR5,DDX42,VCPKMT,SCNN1D,CCDC24,MRPS25,POLM,TXNIP,RBP5,MPZL3,FMNL3,HLA-DMB,BRD4,ERCC5,IKZF3,GCA,MAX,HCST,FAAP100,ATM,ARHGEF2,SLC26A11,STAMBPL1,PTK2B,FANCL,NCF4,ILF3,PLEKHG5,STK17B,SP140,GLI4,LENG8,SH2B1,CDC42SE1,PHKA2,RANBP3,STK11,C1orf159,PPP1R12C,ATP2A3,DGKA,PRR3,UBE2G2,IP6K2,PPOX,ARIH2,PPWD1,FAM102A,MLLT6,CYB561A3,C16orf54,UCP2,INO80D,GPSM3,TRIM65,CRLF3,DDX55,RASAL3,TESK2,ADPRM,ARFGAP1,CASP2,CAPN10,BICDL2,CD19,AP1G2,RASAL1,FAM111A,BANP,TNFAIP3,THOC1,ANKMY1,PML,LPXN,AKNA,RIPK3,LRRC25,NUMA1,FAM107B,PHF12,GPN2,TNK2,INTS11,ARHGAP27,RALGPS2,REXO1,CD8A,FOXP3,NBEAL2,CSNK1D,PARP12,CD48,RASGRP2,PIK3AP1,GDPD3,CACNB1,ZNF44,NCKAP1L,NPDC1,LTO1,LCP2,TRAF1,PIDD1,FGR,CD247,MTUS1,SEMA4D,FNBP1,CCDC137,ALS2CL,HLA-DQB1,NUP210,FBXO44,ICAM2,RNF135,METTL23,ANKDD1A,EXD3,NFKBID,LRIG2,P4HTM,CABLES2,ABTB1,PCED1A,TASL,SLX4,PDCD1,CIITA,IKBKB,NBPF11,BRF1,ACIN1,CD79B,MS4A1,ARHGAP17,ENOSF1,MAU2,CD3G,PIK3R5,ANKRD49,PAXBP1,TNFRSF13C,LY75,SCIMP,UNC93B1,ITK,FNBP4,DENND6B,PRMT7,LRRC56,ZFYVE19,INPP5E,SYNRG,ARHGDIB,PHF11,RSRP1,RHBDF2,PPM1K,SSH2,NEK8,CHD2,LAG3,PTPN6,CLEC2D,SYNGR2,MCOLN2,PTPN22,LTB4R,KIFC2,EXOC3L4,ODF3B,HEMK1,CNPY3,LINS1,PRAM1,ROGDI,RABEP2,TRIM22,OGFR,GSAP,STAT6,GGA2,DOCK8,C2orf68,SCARF1,NDUFAF7,NOL4L,RBM6,DRAM2,TRMT13,PARVG,ZNF862,WBP2,IDUA,TMEM134,ARRB2,ORAI3,CCDC142,RASSF5,RAC2,MYL5,CD3D,NLRP1,FRMD8,DOK2,BTN2A2,CETP,TNFRSF14,ZHX2,WDR27,CASP1,UBXN11,EME2,LAIR1,KHDC4,DCAF15,CROCC,PLXNB1,USF2,PPP1R26,HPS4,PNISR,SFPQ,TMEM63A,FHOD1,LCP1,PTPN7,CEPT1,CARD8,SIGLEC10,PLA2G2D,SRSF7,NISCH,CCDC97,ATAT1,IFFO1,DNMT1,PLCG1,SESN1,MYO1F,RASSF1,MYO9B,TRMU,PPP1R18,KLF12,NAGK,ITGB2,GZMH,CTBP1,BICRA,TACC3,PKP4,ATXN7L2,PARP15,STARD3,CHTF18,IL4R,AKAP8,TFEB,PLEK,FBXO41,TJAP1,RNF44,ITGB7,FMNL1,C1orf35,CEP95,ACAP1,TBRG1,STING1,TBP,CD4,CD79A,ZCWPW1,NPRL2,KLHDC4,CCNL2,PCED1B,CCDC115,CLK3,RNPC3,AFMID,ANKRD10,IRF1,TENT4A,TNFRSF1B,HDAC11,VPS9D1,LRCH3,GABBR1,CHTOP,SNX20,MSL3,KANSL3,EHBP1L1,SCAF4,CCNT2,STAT4,RAB40B,OSBPL7,SP100,SEPTIN1,KAT2A,ACBD4,SLC17A9,SIPA1,BCL2A1,RBM26,CLDND1,PLA2G6,MARCHF1,ZBTB3,MROH6,RBM25,VAV1,FBXW7,ARAP1,CD7,RHPN1,ENDOV,P2RY8,COL9A2,CLSTN3,RARG,CLDN15,TAPBP,LNPEP,IRF7,PRPF39,RESF1,SERTAD2,ERMARD,SIRPG,FAM117A,EPS8L1,FAM53B,ENTPD4,SGSH,SRRM2,MIB2,DPEP2,WHRN,PIK3IP1,PHF1,MTHFR,HAPLN3,HDAC10,TGIF2,SCRN2,GMFG,HSF4,ARGLU1,ANKS3,NOXA1,YJEFN3,CCNL1,CEACAM21,RUBCN,RGL3,IRF2,SLC9A9,SGSM2,INPP1,VMAC,TCL1A,KRI1,DBNL,BTK,MADD,MICALL2,AMPD3,CRYGS,DENND2D,HLA-DOB,LBHD1,QRICH1,MFNG,MOB3C,JUP,ZGPAT,ADCY6,PPM1M,TIA1,HOOK2,BIRC3,ZNF83,RETREG3,TMUB2,PLCG2,SP110,NSUN6,KLHL6,DNMT3A,ABCD4,PTPN2,CERKL,ERCC3,C15orf62,NEIL1,SZT2,POLE,DDX5,GRIPAP1,PLCB2,NAT9,UBA7,LIPT1,LRRK1,STK4,CXCR6,IL2RB,RASSF4,CRAMP1,IGFLR1,LUC7L,WDR6,PNN,LUC7L2,RUNX3,MAP2K7,SAMD9L,DPH7,CCL5,CBX8,POU6F1,TRA2A,NSMCE4A,ORAI2,CEP131,DUS1L,SH2D3C,NEURL4,HINFP,PREX1,NR2C1,CRTC2,APBB3,NRIP2,CYTH2,RCC2,WBP1,RBM33,NOL8,NADSYN1,LRCH4,SRRT,AGAP6,WRAP73,MYO1G,GABPB2,TNFRSF18,SH2D2A,RBM39,ODF2L,TNFAIP2,SLC26A6,PGS1,MSL2,UBE2I,IRF3,CLEC16A,EAF2,BLNK,NRF1,SLA2,RFX5,SNAI3,ZXDC,SEL1L3,APOBR,GAK,KAT8,INTS3,PIGL,ARHGAP30,SELPLG,CSAD,AGAP3,KIAA0895L,RINL,DDX39A,TBC1D10C,ABCA2,TRANK1,SAMD10,CD52,MUTYH,DCAF8,LAMA5,KIF21B,PHYKPL,TMEM259,CD1D,CACTIN,LST1,OGA,PYCR2,RECQL5,PAN3,PHKG2,MED28,NARF,SARS2,ARHGAP4,SELL,ASB6,TBC1D17,ZC3H4,SUPT7L,RALGDS,HLA-DOA,HID1,ARHGAP9,RIPOR2,CENPT,CYTH1,PACS2,S100PBP,CFAP410,CARD11,EMB,MTG1,FAM76B,POGZ,PLEKHH3,CXCR4,VNN2,ARRDC2,C2CD2L,SH2B2,TSC2,CYTIP,RHOG,PCNT,ANAPC2,TAF1C,TRAF3,MAP3K12,SIT1,LCAT,TRAPPC14,ARHGAP45,RHBDF1,HVCN1,CAPN15,CNKSR1,MAL,CXXC1,EZH1,SKAP1,MRNIP,ELMOD3,DDX17,FERMT3,TRIM62,GSTM2,NECAP2,ING4,MED15,HAUS5,APOL3,SENP7,CHFR,MTRF1,RAD52,REC8,HDAC7,DYRK1A,MARF1,GZMK,PGGHG,LAT2,TELO2,CDAN1,WSB1,IL18BP,PCYOX1L,GAB3,LAPTM5,ANO9,ITGAL,CBLN3,PSTPIP2,USP21,PTGDS,TIGD1,KLC1,GPS2,TRIM52,NOL12,DFFB,TTC13,ADGRG5,MBD6,CWC25,STK36,HMGN1,TTC32,MICAL1,AGAP2,ZMAT1,GOLGA8B,GRB2,FAM78A,GIMAP6,ALPK1,STRADA,SMG9,NLRC3,CCDC88C,ZNF18,LZTS2,GOLGA8A,ABI3,PAM16,MPEG1,SETD4,HLA-E,RFX1,RNPEPL1,PIKFYVE,AARSD1,GMEB2,DUSP28,RBM5,APOBEC3D,PLXND1,FYB1,NKTR,YPEL3,SAP30BP,CNP,PLEKHO1,C19orf71,IL2RG,TTLL3,SLC25A45,GBP4,ETS1,RXRB,PARP6,RCSD1,STK10,WDR33,OBSCN,TBC1D10A,SLAMF6,GNGT2,PLEKHN1,LRP5L,TSC1,SH3GLB2,MAP4K2,DENND4B,TEP1,USPL1,JAG2,USP20,TMC6,DPP9,EBI3,MRPL38,WHAMM,LIG1,NELFA,NFKBIE,CCDC57,RABL2B,TRAPPC2,SIRT7,STK38

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

DCAF8,NPDC1,STAP1,CD3G,GTF2H4,RUNX3,DNASE1,HLA-DRA,SLA2,CD19,SGSH,ATAT1,ZMAT1,PGS1,HAUS5,ADRBK2,DGCR8,CDC42EP1,ALPK1,RNF213,DOCK2,OXLD1,TJAP1,RLTPR,HSH2D,LPAR2,STX16,TBC1D10C,IGFLR1,HEMK1,TBP,DDX17,TNFAIP8L2,REC8,UBA7,MSL2,RBM5,CD2,TIGD1,C9orf114,TMEM106A,ING4,IL3RA,RGL3,DAPP1,PLEKHG5,UCP2,GPR65,LSP1,ZNF83,LBHD1,CCDC64B,CWC25,KIAA1551,ADAM19,PIK3IP1,APOBR,RASAL3,TATDN2,INTS3,AGO4,C7orf43,HIP1R,SH2D2A,ENOSF1,CXorf21,TRAF3IP3,PIK3CD,MAPK8IP3,CDC42SE1,DPEP2,TMCO6,SNX20,SIN3B,MZF1,RAD9A,ICAM2,C3orf62,VAMP1,FCRLA,MYL5,PAPLN,SLC48A1,CD3D,CNOT3,RNF135,KIAA0907,STRADA,FYB,IKZF3,ARHGEF1,RAPGEF3,TBKBP1,DNMT1,MAU2,SETD4,CCDC97,GIMAP6,SIT1,ACCS,RABEP2,CCDC137,CHFR,C2orf68,GRIPAP1,PIK3C2B,WSB1,GGA1,CCDC130,TNFRSF13C,SLC26A11,AMPD3,PIK3R5,ARRDC2,LAIR1,TAGAP,FAM111A,CYTH2,SUGP1,MFSD8,MLXIP,CD48,NCF1,CCNL1,ITPKB,S100PBP,CEP135,GZMM,CFLAR,RCAN3,LCP2,TRIM22,AARSD1,FAM65B,SLX4,SYNGR2,HECA,RBM6,ERCC3,ARHGAP30,MED28,CCL21,FOXK2,BTN2A2,AP4B1,FGD2,MDM4,CIRBP,FLI1,CASP10

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for TNRC6C-AS1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

P4HB,GOT1,ATP5F1B,MIPEP,SLC25A3,ADH5,MRPL15,HSPA9,MAIP1

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000204282	ENST00000589217	exon_skip_75398	chr11:72692752-72692785	-13.51	-0.7111	ARAP1	ENST00000393605	In-frame
ENSG00000204282	ENST00000589217	exon_skip_302276	chr19:10808568-10808580	-7.62	-3.8100	DNM2	ENST00000355667	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000204282	ENST00000589217	exon_skip_143275	chr16:24939363-24939597	-33.63	-0.1557	ARHGAP17	ENST00000289968	In-frame
ENSG00000204282	ENST00000589217	exon_skip_482403	chr8:27445793-27445919	-16.32	-0.1700	PTK2B	ENST00000346049,ENST00000397501	In-frame
ENSG00000204282	ENST00000589217	exon_skip_499791	chr9:128627924-128627942	-5.75	-0.5227	SPTAN1	ENST00000372731	In-frame

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for TNRC6C-AS1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID	LncRNA Ensembl ID	Chromosome	Editing Position	Strand	Gene Type	Gene Name	Transcript ID	Transcript Type	Transcript Name
LncEditing_336890	ENSG00000204282.4	chr17	78108936	-	processed_transcript	TNRC6C-AS1	ENST00000592939.1	retained_intron	TNRC6C-AS1-002
LncEditing_336892	ENSG00000204282.4	chr17	78108937	-	processed_transcript	TNRC6C-AS1	ENST00000592939.1	retained_intron	TNRC6C-AS1-002

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID	LncRNA Index	Cancer Type	Chr_Postion_Strand	AVE1	AVE2	log2FC	W-value	P-value	Adjc.p-value	Change
ENSG00000204282	LncEditing_336890	UCS	chr17_78108936_-	5.434100e+00	2.347878e+00	8.259794e-01	3.257856e+00	1.122573e-03	2.378334e-03	UP
ENSG00000204282	LncEditing_336890	UVM	chr17_78108936_-	3.883544e+00	2.206510e+00	1.226080e+00	3.957660e+00	7.568769e-05	1.699533e-04	UP
ENSG00000204282	LncEditing_336890	THCA	chr17_78108936_-	6.751295e+00	5.193377e+00	2.642069e+00	4.360797e+00	1.295897e-05	1.740205e-05	UP
ENSG00000204282	LncEditing_336890	THYM	chr17_78108936_-	6.251829e+00	4.976991e+00	3.039471e+00	2.090043e+00	3.661394e-02	3.779954e-02	UP
ENSG00000204282	LncEditing_336890	OV	chr17_78108936_-	2.372538e+00	1.646305e+00	1.896814e+00	6.305280e+00	2.876724e-10	5.014499e-10	UP
ENSG00000204282	LncEditing_336892	OV	chr17_78108937_-	2.259629e+00	1.786162e+00	2.947915e+00	4.261739e+00	2.028426e-05	2.446083e-05	UP
ENSG00000204282	LncEditing_336890	LUAD	chr17_78108936_-	4.987543e+00	3.009052e+00	1.371704e+00	6.895252e+00	5.376935e-12	8.466229e-12	UP
ENSG00000204282	LncEditing_336890	STAD	chr17_78108936_-	1.711305e+00	1.191471e+00	1.914411e+00	5.278621e+00	1.301594e-07	1.713127e-07	UP
ENSG00000204282	LncEditing_336890	CESC	chr17_78108936_-	4.293073e+00	2.467666e+00	1.251778e+00	4.630526e+00	3.647374e-06	4.938480e-06	UP
ENSG00000204282	LncEditing_336890	ESCA	chr17_78108936_-	2.444390e+00	1.156380e+00	9.260463e-01	3.936291e+00	8.275048e-05	1.046110e-04	UP

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID	LncRNA Index	Correlation	P-value	Adjc.p-value
ENSG00000204282	LncEditing_336890	-3.673152e-01	1.577779e-04	2.689983e-04
ENSG00000204282	LncEditing_336890	-5.758367e-01	1.556358e-02	2.889844e-02
ENSG00000204282	LncEditing_336890	-3.304715e-01	4.881921e-03	6.679528e-03
ENSG00000204282	LncEditing_336890	-4.370366e-01	1.395689e-02	2.408929e-02
ENSG00000204282	LncEditing_336890	-5.884761e-01	4.974788e-04	2.354733e-03

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID	PC Gene ID	PC Gene Name	Positive correlated cancers	Cancer with PC gene up-regulation	Cancer with PC gene down-regulation
ENSG00000204282	ENSG00000061938	TNK2	BLCA,CHOL,COAD,GBM,KIRC,KIRP,LAML,LUAD,LUSC,OV,PAAD,PRAD,THCA,UCEC		GBM
ENSG00000204282	ENSG00000067836	ROGDI	BLCA,GBM,HNSC,LGG,LUAD,UCS		GBM
ENSG00000204282	ENSG00000073605	GSDMB	BLCA,CESC,CHOL,HNSC,KIRC,KIRP,LUAD,LUSC,TGCT,THCA,UCS	THCA
ENSG00000204282	ENSG00000105643	ARRDC2	BLCA,DLBC,GBM,HNSC,KIRC,KIRP,LAML,LGG,MESO,PAAD,SKCM,THCA	THCA
ENSG00000204282	ENSG00000108773	KAT2A	BLCA,CHOL,DLBC,HNSC,KIRC,LUAD,LUSC,OV,PAAD,THCA,UCS,UVM	BLCA
ENSG00000204282	ENSG00000117616	RSRP1	BLCA,BRCA,CESC,CHOL,ESCA,HNSC,KIRC,LUAD,LUSC,MESO,OV,PAAD,TGCT,THCA,UCS	BLCA
ENSG00000204282	ENSG00000124143	ARHGAP40	BLCA,LUAD,OV,UCEC,UCS	BLCA
ENSG00000204282	ENSG00000130590	SAMD10	BLCA,CHOL,ESCA,HNSC,KIRC,KIRP,LAML,LUAD,LUSC,TGCT,THCA,UCS	BLCA
ENSG00000204282	ENSG00000132680	KHDC4	BLCA,ESCA,HNSC,KIRC,KIRP,LAML,LUAD,LUSC,PAAD,PRAD,READ,STAD,THCA,THYM	BLCA
ENSG00000204282	ENSG00000138834	MAPK8IP3	BLCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,LAML,LUAD,LUSC,MESO,OV,PAAD,PRAD,STAD,THCA,UCS		GBM
ENSG00000204282	ENSG00000141524	TMC6	BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,OV,PAAD,PRAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS,UVM	BLCA,ESCA,THCA	GBM
ENSG00000204282	ENSG00000142675	CNKSR1	BLCA,LUAD,OV,THCA,UCEC,UCS	BLCA
ENSG00000204282	ENSG00000148341	SH3GLB2	BLCA,GBM,KIRP,LGG,OV,TGCT,THCA,UCS		GBM
ENSG00000204282	ENSG00000148824	MTG1	BLCA,BRCA,CHOL,COAD,ESCA,HNSC,KIRC,KIRP,PAAD,STAD,THCA,UCS	BLCA
ENSG00000204282	ENSG00000158062	UBXN11	BLCA,CHOL,DLBC,HNSC,KIRC,LUAD,PAAD,PRAD,TGCT	BLCA
ENSG00000204282	ENSG00000158106	RHPN1	BLCA,ESCA,HNSC,OV,THCA,UCS	BLCA,ESCA
ENSG00000204282	ENSG00000163013	FBXO41	BLCA,CHOL,HNSC,KIRP,LUAD,THCA,UCEC,UCS	BLCA,THCA
ENSG00000204282	ENSG00000164855	TMEM184A	BLCA,KIRP,OV,THCA,UCS	THCA
ENSG00000204282	ENSG00000164877	MICALL2	BLCA,DLBC,HNSC,KIRC,KIRP,TGCT,THCA	THCA
ENSG00000204282	ENSG00000167702	KIFC2	BLCA,COAD,KIRC,TGCT,THCA	BLCA
ENSG00000204282	ENSG00000167861	HID1	BLCA,GBM,LGG,THYM,UCS	BLCA	GBM
ENSG00000204282	ENSG00000167880	EVPL	BLCA,LUAD,OV,PRAD,READ,THCA,THYM,UCEC,UCS	THCA
ENSG00000204282	ENSG00000175265	GOLGA8A	BLCA,CHOL,ESCA,HNSC,KIRC,LUAD,LUSC,MESO,OV,PAAD,PRAD,TGCT,UCS,UVM	BLCA
ENSG00000204282	ENSG00000185215	TNFAIP2	BLCA,CESC,HNSC,KIRC,KIRP,SKCM,TGCT,THYM,UCEC	BLCA
ENSG00000204282	ENSG00000187266	EPOR	BLCA,KIRC,KIRP,LUAD,OV,THCA,UCEC,UCS	THCA
ENSG00000204282	ENSG00000187583	PLEKHN1	BLCA,KIRP,LUAD,PRAD,THCA	THCA
ENSG00000204282	ENSG00000196187	TMEM63A	BLCA,GBM,LAML,LGG,LUAD,MESO,OV,THCA,THYM,UCS		GBM
ENSG00000204282	ENSG00000203772	SPRN	BLCA,CHOL,COAD,DLBC,HNSC,KIRP	BLCA
ENSG00000204282	ENSG00000205517	RGL3	BLCA,KIRP,LUAD,OV,THCA,UCEC,UCS	BLCA
ENSG00000204282	ENSG00000215252	GOLGA8B	BLCA,CHOL,ESCA,KIRC,KIRP,LUAD,LUSC,OV,PAAD,PRAD,TGCT,UCS,UVM	BLCA
ENSG00000204282	ENSG00000221978	CCNL2	BLCA,CHOL,COAD,HNSC,KIRC,KIRP,LUAD,LUSC,MESO,OV,PAAD,PRAD,STAD,TGCT,THCA,UCS	BLCA
ENSG00000204282	ENSG00000250067	YJEFN3	BLCA,DLBC,ESCA,KIRC,LAML,LUSC,OV,PAAD,UCS	BLCA
ENSG00000204282	ENSG00000275023	MLLT6	BLCA,CHOL,GBM,HNSC,KIRC,KIRP,LAML,LUAD,LUSC,MESO,PAAD,PRAD,READ,SKCM,TGCT,THCA,THYM,UCS		GBM
ENSG00000204282	ENSG00000091490	SEL1L3	BRCA,TGCT,THCA,THYM,UCS	THCA
ENSG00000204282	ENSG00000105246	EBI3	BRCA,CHOL,KIRC,PAAD,PRAD,SKCM,TGCT,THCA	THCA
ENSG00000204282	ENSG00000108669	CYTH1	BRCA,CHOL,COAD,GBM,HNSC,KIRC,KIRP,LUAD,LUSC,MESO,OV,PAAD,PRAD,SKCM,STAD,TGCT,THYM,UCS		GBM
ENSG00000204282	ENSG00000139190	VAMP1	BRCA,CHOL,ESCA,GBM,HNSC,KIRC,KIRP,LUAD,LUSC,MESO,PAAD,SKCM		GBM
ENSG00000204282	ENSG00000184574	LPAR5	BRCA,CHOL,KIRC,KIRP,SKCM,THCA,UCS	THCA
ENSG00000204282	ENSG00000187239	FNBP1	BRCA,CHOL,GBM,HNSC,KIRC,KIRP,LAML,LGG,PAAD,SKCM,TGCT		GBM
ENSG00000204282	ENSG00000187764	SEMA4D	BRCA,CESC,CHOL,COAD,GBM,HNSC,KIRC,LGG,PAAD,SKCM,STAD		GBM
ENSG00000204282	ENSG00000010810	FYN	CHOL,KIRC,PAAD,TGCT,THCA	THCA
ENSG00000204282	ENSG00000011021	CLCN6	CHOL,GBM,KIRC,LUAD,PAAD		GBM
ENSG00000204282	ENSG00000053702	NRIP2	CHOL,DLBC,GBM,KIRC,LGG,PAAD		GBM
ENSG00000204282	ENSG00000080822	CLDND1	CHOL,GBM,HNSC,LGG,UVM		GBM
ENSG00000204282	ENSG00000100068	LRP5L	CHOL,DLBC,KIRP,LUAD,LUSC,READ,STAD,TGCT,THCA,UCS,UVM	THCA
ENSG00000204282	ENSG00000100242	SUN2	CHOL,GBM,LGG,MESO,PAAD,TGCT		GBM
ENSG00000204282	ENSG00000106100	NOD1	CHOL,KIRC,KIRP,PAAD,THCA	THCA
ENSG00000204282	ENSG00000107317	PTGDS	CHOL,GBM,LGG,PAAD,TGCT		GBM
ENSG00000204282	ENSG00000108799	EZH1	CHOL,DLBC,ESCA,GBM,HNSC,KIRC,LAML,LUAD,LUSC,MESO,PAAD,THCA,UCS		GBM
ENSG00000204282	ENSG00000116525	TRIM62	CHOL,ESCA,GBM,KIRC,PAAD		GBM
ENSG00000204282	ENSG00000116852	KIF21B	CHOL,GBM,LAML,PAAD,SKCM		GBM
ENSG00000204282	ENSG00000129667	RHBDF2	CHOL,ESCA,KIRC,KIRP,LUAD,OV,PAAD,PRAD,STAD,TGCT,THYM,UCEC,UCS	ESCA
ENSG00000204282	ENSG00000135723	FHOD1	CHOL,KIRC,LUAD,PAAD,TGCT,THCA	THCA
ENSG00000204282	ENSG00000135905	DOCK10	CHOL,GBM,KIRC,MESO,PAAD,STAD,TGCT		GBM
ENSG00000204282	ENSG00000148832	PAOX	CHOL,DLBC,GBM,HNSC,LAML,LGG,PAAD,TGCT,THCA		GBM
ENSG00000204282	ENSG00000163644	PPM1K	CHOL,DLBC,GBM,HNSC,MESO,PAAD		GBM
ENSG00000204282	ENSG00000172005	MAL	CHOL,GBM,LGG,PAAD,TGCT		GBM
ENSG00000204282	ENSG00000175567	UCP2	CHOL,HNSC,PAAD,SKCM,TGCT,THCA	THCA
ENSG00000204282	ENSG00000184584	STING1	CHOL,HNSC,KIRP,PAAD,READ,TGCT,THCA	THCA
ENSG00000204282	ENSG00000187994	RINL	CHOL,DLBC,HNSC,PAAD,SKCM,TGCT,THCA,UCEC	THCA
ENSG00000204282	ENSG00000189319	FAM53B	CHOL,DLBC,GBM,HNSC,KIRC,LGG,PAAD		GBM
ENSG00000204282	ENSG00000049089	COL9A2	DLBC,GBM,HNSC,LGG,MESO		GBM
ENSG00000204282	ENSG00000107331	ABCA2	DLBC,ESCA,GBM,HNSC,LAML,LGG,UCS		GBM
ENSG00000204282	ENSG00000107829	FBXW4	DLBC,GBM,LAML,LGG,UCS		GBM
ENSG00000204282	ENSG00000163517	HDAC11	DLBC,GBM,HNSC,LGG,UCS		GBM
ENSG00000204282	ENSG00000167106	FAM102A	DLBC,GBM,LAML,LGG,THYM		GBM
ENSG00000204282	ENSG00000179364	PACS2	DLBC,GBM,KIRC,LAML,LGG,LUAD,PRAD,THCA,UCS		GBM
ENSG00000204282	ENSG00000203485	INF2	DLBC,ESCA,GBM,KIRC,LGG,THCA,UCEC,UCS	THCA	GBM
ENSG00000204282	ENSG00000204839	MROH6	DLBC,KIRC,KIRP,THCA,THYM,UCEC,UCS	THCA
ENSG00000204282	ENSG00000107816	LZTS2	ESCA,GBM,HNSC,KIRC,LAML,LGG,THCA,UCS,UVM		GBM
ENSG00000204282	ENSG00000132471	WBP2	ESCA,GBM,TGCT,THCA,THYM,UCS		GBM
ENSG00000204282	ENSG00000277363	SRCIN1	ESCA,GBM,LGG,LUAD,THCA,UCS	THCA	GBM
ENSG00000204282	ENSG00000065809	FAM107B	GBM,LGG,SKCM,TGCT,THYM		GBM
ENSG00000204282	ENSG00000070759	TESK2	GBM,HNSC,LAML,LGG,PAAD		GBM
ENSG00000204282	ENSG00000079337	RAPGEF3	GBM,LAML,LGG,THCA,UCS		GBM
ENSG00000204282	ENSG00000095397	WHRN	GBM,HNSC,KIRC,KIRP,LGG,UVM		GBM
ENSG00000204282	ENSG00000111344	RASAL1	GBM,THCA,THYM,UCEC,UCS		GBM
ENSG00000204282	ENSG00000129422	MTUS1	GBM,HNSC,LGG,THCA,UCS	THCA	GBM
ENSG00000204282	ENSG00000144283	PKP4	GBM,HNSC,LGG,THCA,UCS		GBM
ENSG00000204282	ENSG00000173786	CNP	GBM,HNSC,LGG,THCA,THYM		GBM
ENSG00000204282	ENSG00000197183	NOL4L	GBM,KIRC,LAML,THCA,UCEC,UCS		GBM
ENSG00000204282	ENSG00000211584	SLC48A1	GBM,LAML,LGG,TGCT,UCS		GBM
ENSG00000204282	ENSG00000004399	PLXND1	KIRC,KIRP,LAML,MESO,THCA	THCA
ENSG00000204282	ENSG00000007384	RHBDF1	KIRC,LAML,LUAD,THCA,UCS	THCA
ENSG00000204282	ENSG00000107281	NPDC1	KIRC,KIRP,LAML,THCA,UCS,UVM	THCA
ENSG00000204282	ENSG00000171680	PLEKHG5	KIRC,KIRP,OV,PAAD,THCA,UCS	THCA
ENSG00000204282	ENSG00000184916	JAG2	KIRC,MESO,THCA,THYM,UCEC	THCA
ENSG00000204282	ENSG00000101194	SLC17A9	KIRP,LUSC,TGCT,THCA,THYM,UCS	THCA
ENSG00000204282	ENSG00000118242	MREG	KIRP,LAML,TGCT,THCA,UCS	THCA
ENSG00000204282	ENSG00000188277	C15orf62	KIRP,LAML,LUAD,PAAD,THCA,UCS	THCA

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000020633	RUNX3	5	BRCA,CHOL,PAAD,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000020633	RUNX3	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000020633	RUNX3	5	KIRC,KIRP,PAAD,PRAD,STAD
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000020633	RUNX3	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000020633	RUNX3	5	BRCA,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000020633	RUNX3	5	CHOL,HNSC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000204287	HLA-DRA	5	BRCA,CHOL,PAAD,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000101082	SLA2	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000101082	SLA2	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000177455	CD19	5	CHOL,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000166432	ZMAT1	5	CHOL,DLBC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000087157	PGS1	5	CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000249115	HAUS5	6	CHOL,HNSC,KIRC,PAAD,PRAD,THCA
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000249115	HAUS5	5	CHOL,HNSC,KIRC,PAAD,THCA
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000128191	DGCR8	5	KIRC,KIRP,LUAD,PRAD,STAD
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000073331	ALPK1	5	CHOL,ESCA,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000134516	DOCK2	5	BRCA,CHOL,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000134516	DOCK2	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000134516	DOCK2	5	CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000196684	HSH2D	6	CHOL,KIRC,KIRP,LUAD,PAAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000196684	HSH2D	5	CHOL,PAAD,SKCM,TGCT,THYM
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000196684	HSH2D	6	KIRC,KIRP,LUAD,LUSC,PAAD,STAD
ENSG00000204282	ENSG00000185507	IRF7	ENSG00000196684	HSH2D	6	CHOL,KIRC,KIRP,LUAD,PAAD,TGCT
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000124222	STX16	7	KIRC,KIRP,LUAD,LUSC,OV,PAAD,PRAD
ENSG00000204282	ENSG00000173120	KDM2A	ENSG00000124222	STX16	5	CHOL,KIRC,KIRP,MESO,PAAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000124222	STX16	5	BLCA,CHOL,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000175463	TBC1D10C	5	CHOL,HNSC,KIRC,KIRP,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000175463	TBC1D10C	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000175463	TBC1D10C	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000175463	TBC1D10C	5	BRCA,CHOL,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000175463	TBC1D10C	5	CHOL,DLBC,HNSC,PAAD,TGCT
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000175463	TBC1D10C	6	BRCA,CESC,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000126246	IGFLR1	5	CHOL,KIRC,KIRP,LUAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000126246	IGFLR1	5	CHOL,KIRC,LUAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000163154	TNFAIP8L2	5	CHOL,HNSC,KIRC,PRAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000163154	TNFAIP8L2	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000163154	TNFAIP8L2	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000163154	TNFAIP8L2	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000163154	TNFAIP8L2	5	BRCA,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000182179	UBA7	7	CHOL,HNSC,KIRC,LUAD,PAAD,TGCT,THCA
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000182179	UBA7	7	BRCA,CHOL,KIRC,LUAD,PAAD,TGCT,THCA
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000182179	UBA7	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000182179	UBA7	5	BRCA,KIRC,LUAD,LUSC,PAAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000182179	UBA7	5	BRCA,CESC,CHOL,HNSC,KIRC
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000182179	UBA7	7	CESC,CHOL,ESCA,HNSC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000003756	RBM5	6	BLCA,COAD,DLBC,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000003756	RBM5	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000003756	RBM5	6	KIRC,LUAD,LUSC,PAAD,PRAD,STAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000003756	RBM5	5	CHOL,DLBC,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000003756	RBM5	6	BLCA,CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000116824	CD2	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000116824	CD2	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000116824	CD2	6	BRCA,CESC,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000116824	CD2	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000198917	SPOUT1	5	CHOL,HNSC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000198917	SPOUT1	5	CHOL,HNSC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000185291	IL3RA	6	BRCA,CHOL,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000070190	DAPP1	5	CHOL,PAAD,SKCM,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000070190	DAPP1	6	CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000070190	DAPP1	5	CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000140030	GPR65	6	BRCA,KIRC,PAAD,SKCM,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000140030	GPR65	6	BRCA,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000130592	LSP1	5	BRCA,CHOL,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000130592	LSP1	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000130592	LSP1	5	CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000167766	ZNF83	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000167766	ZNF83	5	CHOL,HNSC,KIRC,KIRP,TGCT
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000273559	CWC25	5	CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000174718	RESF1	5	CHOL,KIRC,MESO,PAAD,SKCM
ENSG00000204282	ENSG00000173120	KDM2A	ENSG00000174718	RESF1	5	CHOL,KIRC,KIRP,MESO,PAAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000105122	RASAL3	7	CHOL,HNSC,KIRC,KIRP,LUAD,PRAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000105122	RASAL3	7	BRCA,CHOL,KIRC,LUAD,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000105122	RASAL3	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000105122	RASAL3	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000105122	RASAL3	6	BRCA,CESC,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000105122	RASAL3	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000157014	TATDN2	7	CHOL,HNSC,KIRC,KIRP,PAAD,PRAD,TGCT
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000146826	TRAPPC14	5	CHOL,DLBC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000027869	SH2D2A	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000120280	TASL	5	BRCA,PAAD,SKCM,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000120280	TASL	6	BRCA,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000171608	PIK3CD	6	BRCA,CHOL,KIRC,LUAD,PAAD,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000171608	PIK3CD	6	BRCA,CHOL,KIRC,MESO,PAAD,TGCT
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000171608	PIK3CD	7	BRCA,KIRC,KIRP,LUAD,PAAD,PRAD,STAD
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000171608	PIK3CD	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000138834	MAPK8IP3	6	BLCA,COAD,DLBC,ESCA,KIRC,LUSC
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000138834	MAPK8IP3	6	CHOL,KIRC,LUAD,PAAD,PRAD,THCA
ENSG00000204282	ENSG00000166888	STAT6	ENSG00000138834	MAPK8IP3	5	BLCA,KIRC,LUSC,OV,PAAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000138834	MAPK8IP3	5	KIRC,LUAD,LUSC,PAAD,PRAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000138834	MAPK8IP3	5	CHOL,DLBC,KIRC,PAAD,THCA
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000138834	MAPK8IP3	5	BLCA,CHOL,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000113119	TMCO6	5	HNSC,KIRC,KIRP,PAAD,THCA
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000167208	SNX20	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000167208	SNX20	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000167208	SNX20	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000099326	MZF1	5	BLCA,DLBC,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000099326	MZF1	5	CHOL,HNSC,KIRC,KIRP,LUAD
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000099326	MZF1	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000172613	RAD9A	5	CHOL,HNSC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000172613	RAD9A	5	CHOL,HNSC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000172613	RAD9A	5	BLCA,CHOL,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000108622	ICAM2	5	CHOL,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000188315	C3orf62	5	CHOL,HNSC,KIRC,TGCT,THCA
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000188315	C3orf62	5	CHOL,DLBC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000188315	C3orf62	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000139190	VAMP1	6	CHOL,HNSC,KIRC,KIRP,LUAD,PAAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000139190	VAMP1	5	KIRC,KIRP,LUAD,LUSC,PAAD
ENSG00000204282	ENSG00000173120	KDM2A	ENSG00000139190	VAMP1	6	CHOL,KIRC,KIRP,LUAD,MESO,PAAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000167286	CD3D	5	CHOL,HNSC,KIRC,PRAD,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000167286	CD3D	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000167286	CD3D	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000132680	KHDC4	5	BLCA,ESCA,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000132680	KHDC4	5	BLCA,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000266173	STRADA	6	KIRC,LUAD,LUSC,OV,PAAD,STAD
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000161405	IKZF3	5	CHOL,PAAD,SKCM,TGCT,THCA
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000161405	IKZF3	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000161405	IKZF3	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000076928	ARHGEF1	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000076928	ARHGEF1	6	BRCA,CHOL,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000185507	IRF7	ENSG00000076928	ARHGEF1	5	CHOL,KIRC,KIRP,PAAD,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000076928	ARHGEF1	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000076928	ARHGEF1	6	CHOL,DLBC,KIRC,KIRP,PAAD,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000076928	ARHGEF1	5	CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000185917	SETD4	5	BLCA,COAD,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000185917	SETD4	5	BLCA,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000177548	RABEP2	5	CHOL,HNSC,LUAD,PAAD,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000072609	CHFR	5	BRCA,CHOL,KIRC,MESO,PAAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000072609	CHFR	5	BRCA,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000068400	GRIPAP1	5	CHOL,HNSC,KIRC,KIRP,THCA
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000100083	GGA1	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000100083	GGA1	6	CHOL,HNSC,KIRC,KIRP,PAAD,THCA
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000100083	GGA1	5	BLCA,CHOL,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000104957	CCDC130	5	BLCA,DLBC,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000104957	CCDC130	6	CHOL,HNSC,KIRC,KIRP,LUAD,PAAD
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000104957	CCDC130	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000185507	IRF7	ENSG00000104957	CCDC130	5	CHOL,KIRC,KIRP,LUAD,PAAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000104957	CCDC130	6	CHOL,DLBC,HNSC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000104957	CCDC130	5	BLCA,CHOL,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000159958	TNFRSF13C	5	CHOL,DLBC,PAAD,SKCM,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000159958	TNFRSF13C	6	CHOL,DLBC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000141506	PIK3R5	6	BRCA,CHOL,KIRC,MESO,PAAD,SKCM
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000141506	PIK3R5	5	BRCA,CHOL,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000105643	ARRDC2	5	DLBC,HNSC,KIRP,PAAD,THCA
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000164691	TAGAP	5	BRCA,CHOL,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000164691	TAGAP	5	BRCA,CHOL,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000105443	CYTH2	5	HNSC,KIRC,LUAD,PRAD,THCA
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000105705	SUGP1	5	CHOL,HNSC,KIRC,KIRP,THCA
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000105705	SUGP1	6	CHOL,DLBC,HNSC,KIRC,KIRP,THCA
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000117091	CD48	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000117091	CD48	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000117091	CD48	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000117091	CD48	5	BRCA,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000117091	CD48	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000163660	CCNL1	5	BLCA,ESCA,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000163660	CCNL1	5	BLCA,CHOL,HNSC,KIRC,PAAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000116497	S100PBP	5	KIRC,KIRP,PAAD,PRAD,STAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000116497	S100PBP	5	CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000197540	GZMM	5	CHOL,HNSC,KIRC,PRAD,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000197540	GZMM	5	BRCA,CHOL,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000197540	GZMM	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000197540	GZMM	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000197540	GZMM	5	BRCA,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000003402	CFLAR	5	CESC,CHOL,HNSC,PAAD,SKCM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000043462	LCP2	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000043462	LCP2	5	BRCA,CHOL,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000132274	TRIM22	5	BRCA,CHOL,PAAD,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000132274	TRIM22	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000108639	SYNGR2	5	CHOL,HNSC,KIRP,TGCT,THCA
ENSG00000204282	ENSG00000102878	HSF4	ENSG00000004534	RBM6	5	BLCA,COAD,HNSC,KIRC,LUSC
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000004534	RBM6	7	CHOL,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD
ENSG00000204282	ENSG00000141258	SGSM2	ENSG00000004534	RBM6	5	BLCA,CHOL,HNSC,KIRC,LUAD
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000004534	RBM6	7	KIRC,KIRP,LUAD,LUSC,OV,PAAD,PRAD
ENSG00000204282	ENSG00000173120	KDM2A	ENSG00000004534	RBM6	5	CHOL,KIRC,KIRP,LUAD,PAAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000004534	RBM6	5	CHOL,HNSC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000004534	RBM6	6	BLCA,CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000186517	ARHGAP30	6	BRCA,CHOL,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000186517	ARHGAP30	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000170581	STAT2	ENSG00000186517	ARHGAP30	6	BRCA,KIRC,KIRP,PAAD,PRAD,STAD
ENSG00000204282	ENSG00000066336	SPI1	ENSG00000186517	ARHGAP30	6	BRCA,CHOL,KIRC,KIRP,PAAD,PRAD
ENSG00000204282	ENSG00000125347	IRF1	ENSG00000186517	ARHGAP30	6	BRCA,CESC,CHOL,HNSC,KIRC,KIRP
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000186517	ARHGAP30	6	CHOL,HNSC,KIRC,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000128604	IRF5	ENSG00000124508	BTN2A2	5	BRCA,CHOL,PAAD,TGCT,THYM
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000124508	BTN2A2	5	BRCA,CHOL,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000124508	BTN2A2	6	CHOL,ESCA,HNSC,KIRC,PAAD,TGCT
ENSG00000204282	ENSG00000126456	IRF3	ENSG00000134262	AP4B1	7	CHOL,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD
ENSG00000204282	ENSG00000112511	PHF1	ENSG00000134262	AP4B1	5	CHOL,HNSC,KIRC,KIRP,PAAD
ENSG00000204282	ENSG00000236287	ZBED5	ENSG00000134262	AP4B1	5	CHOL,HNSC,KIRC,PAAD,PRAD
ENSG00000204282	ENSG00000173120	KDM2A	ENSG00000198625	MDM4	5	CHOL,KIRC,KIRP,MESO,PAAD
ENSG00000204282	ENSG00000140968	IRF8	ENSG00000151702	FLI1	7	BRCA,CHOL,KIRC,MESO,PAAD,SKCM,TGCT
ENSG00000204282	ENSG00000168310	IRF2	ENSG00000151702	FLI1	5	CHOL,KIRC,PAAD,SKCM,TGCT

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000204282	ENST00000592939	P4HB	ENSG00000185624	ENST00000576390	-0.5656	2252	GBM	-
ENSG00000204282	ENST00000592939	P4HB	ENSG00000185624	ENST00000439918	-0.5186	2142	GBM	-
ENSG00000204282	ENST00000589217	ADH5	ENSG00000197894	ENST00000502590	-0.1023	40	GBM	-
ENSG00000204282	ENST00000589217	P4HB	ENSG00000185624	ENST00000576390	-0.2008	1033	GBM	-
ENSG00000204282	ENST00000589217	P4HB	ENSG00000185624	ENST00000439918	-0.9880	1176	GBM	-

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000204282.4	ENST00000592939.1	107	102	425
ENSG00000204282.4	ENST00000589217.1	124	599	973

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential