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lncRNA: ENSG00000197301 |
Summary for HMGA2-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000197301 | Gene symbol | HMGA2-AS1 |
| Gene name | HMGA2 antisense RNA 1 | |
| HGNC | 53973 | |
| Entrez ID | 100129940 | |
| Gene type | antisense | |
| Synonyms | HMGA2-AS1|12q14.3|RP11-366L20.2 | |
| UniProtAcc |
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Structure and expression level for HMGA2-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000197301 | 5.288696e+02 | 2.861284e+00 | 1.724721e-01 | 1.658984e+01 | 8.250000e-62 | 1.320000e-59 | UP | THCA |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for HMGA2-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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