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lncRNA: ENSG00000185168 |
Summary for LINC00482 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000185168 | Gene symbol | LINC00482 |
| Gene name | long intergenic non-protein coding RNA 482 | |
| HGNC | 26816 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | LINC00482|17q25.3 | |
| UniProtAcc | Q8N8I6 |
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Structure and expression level for LINC00482 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000185168 | 2.556649e+02 | 1.327236e+00 | 4.300674e-01 | 3.086112e+00 | 2.027927e-03 | 6.452935e-03 | UP | CHOL |
| ENSG00000185168 | 3.253037e+02 | 2.896691e+00 | 3.024321e-01 | 9.577987e+00 | 9.900000e-22 | 1.890000e-20 | UP | KICH |
| ENSG00000185168 | 1.409386e+02 | 2.315170e+00 | 5.194299e-01 | 4.457136e+00 | 8.310000e-06 | 5.870000e-05 | UP | BLCA |
| ENSG00000185168 | 1.622698e+02 | 1.217944e+00 | 1.836712e-01 | 6.631110e+00 | 3.330000e-11 | 1.710000e-10 | UP | LUAD |
| ENSG00000185168 | 1.804961e+02 | 1.762244e+00 | 1.877655e-01 | 9.385346e+00 | 6.270000e-21 | 1.320000e-19 | UP | LIHC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000185168 | 4.670517e-01 | 1.852135e-05 | ACC | 7.408541e-04 |
| ENSG00000185168 | 5.643238e-01 | 5.401149e-05 | CHOL | 1.966392e-04 |
| ENSG00000185168 | 5.436286e-01 | 3.686710e-08 | KICH | 1.614939e-07 |
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lncRNA-Protein interaction for LINC00482 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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