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lncRNA: ENSG00000183250 |
Summary for LINC01547 |
Gene summary |
Gene information | Ensembl ID | ENSG00000183250 | Gene symbol | LINC01547 |
Gene name | long intergenic non-protein coding RNA 1547 | |
HGNC | 15707 | |
Entrez ID | 84536 | |
Gene type | lincRNA | |
Synonyms | 21q22.3|LINC01547 | |
UniProtAcc | P58512 |
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Structure and expression level for LINC01547 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000183250 | 1.575882e+02 | 1.289166e+00 | 3.527830e-01 | 3.654274e+00 | 2.579100e-04 | 3.942955e-03 | UP | PCPG |
ENSG00000183250 | 2.289273e+02 | 1.507596e+00 | 1.600370e-01 | 9.420298e+00 | 4.500000e-21 | 4.940000e-20 | UP | LUAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01547 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000183250 | ENST00000397841 | LINC01547 | ENSG00000156304 | SCAF4 | 28.38 | 92.449 | O95104 | RBP | NA |
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