lncRNAfunc Logo

Home

Download

Statistics

Landscape

Help

Contact
Center for Computational Systems Medicine
leaf

lncRNA summary

leaf

lncRNA structure and expression level

leaf

lncRNA-Protein interaction

leaf

lncRNA-DNA interaction

leaf

lncRNA-RNA interaction

leaf

Variants in lncRNA

leaf

lncRNAs regulate the target genes through functioning as enhancers

leaf

lncRNAs regulate the target genes through recruiting transcript factors

leaf

lncRNAs regulate the alternative splicing events through interacting with splicing factor

leaf

lncRNAs regulate mRNA through targeting the 3'-UTR region

leaf

lncRNAs regulate mRNA by competing with miRNA

leaf

lncRNA coding potential

lncRNA: ENSG00000180769

Summary for WDFY3-AS2

check button Gene summary

Gene informationEnsembl ID

ENSG00000180769

Gene symbol

WDFY3-AS2

Gene nameWDFY3 antisense RNA 2
HGNC

21603

Entrez ID

404201

Gene typeprocessed_transcript
SynonymsWDFY3-AS2|04q21.23
UniProtAcc

Top

Structure and expression level for WDFY3-AS2

check buttonAS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.
UCSC result

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000001807699.268239e+02-1.195104e+009.871100e-02-1.210710e+019.690000e-341.180000e-32DOWNKIRC
ENSG000001807698.841875e+02-1.274168e+001.958436e-01-6.506049e+007.720000e-114.850000e-10DOWNKICH

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG00000180769-5.601973e-011.141626e-08KICH6.132666e-08
ENSG00000180769-4.073824e-011.038886e-25KIRC2.052996e-24
ENSG00000180769-3.538804e-014.855016e-10KIRP5.614536e-09

Top

lncRNA-Protein interaction for WDFY3-AS2

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
TF result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000180769ENST00000451762WDFY3-AS2ENSG00000114126TFDP215.4890.6243Q14188TFNA
ENSG00000180769ENST00000451762WDFY3-AS2ENSG00000186130ZBTB610.1291.3207Q15916TFNA

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
RBP result
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source
ENSG00000180769ENST00000451762WDFY3-AS2ENSG00000056097ZFR83.2496.7925Q96KR1RBPNA

Top

lncRNA-DNA interaction for WDFY3-AS2

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
ARHGEF9,PCYOX1,ADH5,CEBPZ,SPAG9,C6orf89,FAM126B,FPGT,C11orf1,RAB28,DSTYK,RNF141,PEX2,HELQ,CMTM4,PREPL,KLF9,SNX19,MTMR10,PRPSAP2,MTMR6,ZBTB4,TMEM17,DNAJC27,GRSF1,MDM1,ZRANB1,FBXL3,LIFR,IPP,PNPLA4,PEBP1,CRYL1,SCP2,KAT7,STAM2,SMG6,SPTLC1,RFC1,C12orf29,AZI2,NEK4,TMEM184C,RNF170,GCSH,AASDH,PLA2G12A,RTL6,EFCAB14,LAMTOR3,ACBD5,ICE2,NME5,STARD7,GABPA,IKZF5,TOR1AIP1,UTP14C,TCAIM,KLHDC1,AFTPH,PLRG1,ANKIB1,ZC4H2,DHFR2,TTC19,NKIRAS1,GMFB,DCAF7,RHOT1,PPM1A,TOM1L2,ERLIN2,NECAP1,SERINC1,GFM2,ZMYND12,LARP7,MYO9A,PPP2CB,COG6,LZTFL1,KBTBD3,AIMP1,PTCD2,UBR1,ALDH5A1,C2orf42,ISCA1,AMN1,ADD1,SLC18B1,SESN3,LANCL1,FAM167A,KIAA1143,ACTR6,CTSO,INIP,TMED8,KCNJ10,AP5M1,RAB11FIP2,UFSP2,COX18,SPACA9,GPRASP2,DPP8,MPC1,TOGARAM1,SDHC,AP1AR,CHTF8,CAPN7,TMEM192,MTURN,ADD3,ALDH6A1,BORCS7,CYB5D2,SLC25A46,ELP4,IGIP,OPHN1,NAPEPLD,SPATA6,ORC4,DNAJB14,ASH1L,TBCK,MSH3,CLOCK,LYPLAL1,PTAR1,NEBL,BBS10,SYNE1,BBS2,FAN1,MBIP,ALDH7A1,BRMS1L,KANSL1L,LIN54,MMUT,TTC30A,THAP9,ZBTB6,SCAPER,ACOX2,FBXO8,POLR2B,THAP6,ANKRD46,FBXO3,WDFY3,FBXL5,LCMT2,SEC62,VPS36,EVC,ACADM,CREBRF,C4orf33,ZHX3,EHHADH,SLC35A5,PURA,CDNF,ACOX1,BBS12,DTWD2,MBD5,LIAS,TMEM128,DYRK1A,ASXL2,GNPDA2,AK3,DYNLL2,DBT,NEK1,USP46,DZIP3,SLC25A17,NBR1,IFT46,FBXW11,TRAPPC8,RNF11,DNAJC19,RAD21,EID1,KCTD18,C2orf49,GTF2A1,WDR31,NUBPL,ACSM5,CHD9,NCOR1,RNF20,YTHDC1,FAXDC2,PPM1K,CCDC121,PNPO,EPM2A,BHLHB9,PEX11A,AP3S2,DNAJA2,ACADSB,HADHB,RBM18,CRYZL1,FBXO11,PPP6C,DCUN1D1,PTPN13,SALL2,UCHL5,FAM229B,DHX29,MRO,ZFR,ADHFE1,FAM161B,TAPT1,TMEM245,APP,CBR4,MOCS2,LRTOMT,C18orf32,POC1B,HIBCH,C4orf36,FRY,SMARCAD1,PLSCR4,CHURC1,ANXA7,UBE2D3,SCRN3,STAG2,PIKFYVE,AKTIP,GIN1,ALDH2,L2HGDH,CWF19L2,ALAD,CPEB3,VPS54,AASDHPPT,CLCN3,DMAC2L,COA5,SEPSECS,TRMT61B,CRBN,ALDH9A1,SLC30A9,PRPSAP1,STXBP3,CAB39L,ARHGAP5,WDR35,TMEM50B,ZBTB5,THNSL1,PIK3C2A,PAFAH1B1,SKP1,USP16,MPPE1,FBXO36,ANKFY1,XPA,PCMTD1,MRPS14,NDRG2,ABHD17B,TFDP2,ETFRF1,NADK2,RCHY1,BDH2,SWT1,RAB5B,ABLIM1,SMARCA1,TTC33,SUCLA2,GLOD4,TBC1D5,UNC119B,CUL3,RAD17,ADAL,MAPK10
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.
Only predicted by TDF
CMTM4,DCAF7,ATXN1L,PAFAH1B1,FAM167A,SPTLC1,HSDL2,ACSM5,SMARCA2,ANKRD46,TBC1D5,C6orf89,CRYL1,FAN1,APP,NEBL,POC1B,BORCS7,FBXO11,COX18,KANSL1L,CHD9,NEK4,ACOX1,WDR48,ABLIM1,PEX11A,DHX29,FRY,DYNLL2,LDOC1L,ST13,NAPEPLD,SESN3,CRYZL1,PPARA,CTSO,MAT2B,PIK3C3,BCKDHB,CALCOCO2,UNC119B,FAM179B,IDNK,WDR31,C2orf42,PCMTD1,WDFY3,DPP8,ASH1L,COG6,SEPSECS,DNAJC27,TBCK,HLF,CCDC121,NUDT7,TRAPPC10,WWOX,CUL3,ELAC1,RAD17,UFSP2,THNSL1,ALDH2,ARHGEF9,MED21,TOR1AIP1,PIGV,AIMP1,EPM2A,ANKFY1,ABHD17B,FAM161B,KLHL5,TOM1L2,TMEM50B,DHTKD1,KCNJ10,OPHN1,DHX9,ZBTB6,DDX1,IPP
Exist in public source
NA

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

Top

lncRNA-RNA interaction for WDFY3-AS2

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
SSBP4,CENPW,DTX2,SLC16A3,GRAMD1A,SRM,DPP9,GRK6,RPS6KA4,SH3GL1,HM13,TMED9,LIMK1,NOC4L,ALG3,TOMM40,CDCA5,MED15,TRIM11,S100A11,SBNO2,SNRPB,ADRM1,PPAN,CHPF2,LSM7,CORO7,CSK,MIER2,P3H1,PFN1,CD276,TMSB4X,MAN2B1,PTP4A3,SLC52A2,SHKBP1,ANKRD13D,VASP,CCDC124,CD63,SLC35C1,DLGAP4,H2AX,REEP4,R3HDM4,KXD1,NAA10,MANF,TCOF1,NOP16,NCLN,DCAF15,COLGALT1,PGLS
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

Top

Variants for WDFY3-AS2

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

Top

lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation
ENSG00000180769ENSG00000053770AP5M1ACC,KIRC,KIRP,PCPG,THCAKIRC
ENSG00000180769ENSG00000073910FRYACC,KICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000109189USP46ACC,KICH,KIRC,LGG,THCAKIRC
ENSG00000180769ENSG00000113790EHHADHACC,KICH,KIRC,KIRP,PCPG,THCAKICH
ENSG00000180769ENSG00000118965WDR35ACC,KICH,KIRC,PCPG,THCAKICH
ENSG00000180769ENSG00000131018SYNE1ACC,KICH,KIRC,KIRP,THCAKICH,KIRC
ENSG00000180769ENSG00000132122SPATA6ACC,KICH,KIRC,KIRP,THCAKICH
ENSG00000180769ENSG00000148225WDR31ACC,KICH,KIRC,KIRP,LGG,THCAKICH
ENSG00000180769ENSG00000156050FAM161BACC,KICH,KIRC,PCPG,THCAKICH
ENSG00000180769ENSG00000161048NAPEPLDACC,KICH,KIRC,KIRP,THCAKICH,KIRC
ENSG00000180769ENSG00000163629PTPN13ACC,KICH,KIRC,KIRP,PCPGKICH,KIRC
ENSG00000180769ENSG00000165698SPACA9ACC,KICH,KIRC,KIRP,THCAKICH,KIRC
ENSG00000180769ENSG00000168306ACOX2ACC,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000186889TMEM17ACC,GBM,KICH,KIRC,KIRP,PCPGKICH
ENSG00000180769ENSG00000196177ACADSBACC,KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000197557TTC30AACC,GBM,KICH,KIRC,KIRP,THCAKICH
ENSG00000180769ENSG00000264364DYNLL2ACC,KIRC,KIRP,PCPG,THCAKIRC
ENSG00000180769ENSG00000060762MPC1GBM,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000066185ZMYND12GBM,KICH,KIRC,KIRP,THCAKICH,KIRC
ENSG00000180769ENSG00000078114NEBLGBM,KICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000089220PEBP1GBM,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000102547CAB39LGBM,KICH,KIRC,LGG,THCAKIRC
ENSG00000180769ENSG00000109339MAPK10GBM,KICH,KIRC,KIRP,PCPG,THCAKICH,KIRC
ENSG00000180769ENSG00000112425EPM2AGBM,KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000112981NME5GBM,KICH,KIRC,KIRP,THCAKICH
ENSG00000180769ENSG00000114698PLSCR4GBM,KICH,KIRC,KIRP,LGG,THCAKICH
ENSG00000180769ENSG00000117054ACADMGBM,KICH,KIRC,KIRP,THCAKICH,KIRC
ENSG00000180769ENSG00000134042MROGBM,KICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000137992DBTGBM,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000147576ADHFE1GBM,KICH,KIRC,LGG,THCAKIRC
ENSG00000180769ENSG00000148700ADD3GBM,KICH,KIRC,KIRP,LGG,THCAKICH
ENSG00000180769ENSG00000153832FBXO36GBM,KICH,KIRC,KIRP,LGG,THCAKICH
ENSG00000180769ENSG00000154319FAM167AGBM,KICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000163644PPM1KGBM,KICH,KIRC,KIRP,LGG,PCPGKIRC
ENSG00000180769ENSG00000165475CRYL1GBM,KICH,KIRC,KIRP,LGG,PCPGKICH,KIRC
ENSG00000180769ENSG00000165795NDRG2GBM,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000166912MTMR10GBM,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000177807KCNJ10GBM,KICH,KIRC,KIRP,LGGKICH,KIRC
ENSG00000180769ENSG00000179152TCAIMGBM,KICH,KIRC,KIRP,THCAKIRC
ENSG00000180769ENSG00000183549ACSM5GBM,KICH,KIRP,LGG,THCAKICH
ENSG00000180769ENSG00000183723CMTM4GBM,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000198130HIBCHGBM,KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000203778FAM229BGBM,KICH,KIRC,LGG,THCAKICH
ENSG00000180769ENSG00000079482OPHN1KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000087299L2HGDHKICH,KIRC,KIRP,LGG,PCPG,THCAKIRC
ENSG00000180769ENSG00000099204ABLIM1KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000106771TMEM245KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000112294ALDH5A1KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000125375DMAC2LKICH,KIRC,KIRP,PCPG,THCAKIRC
ENSG00000180769ENSG00000136143SUCLA2KICH,KIRC,KIRP,PCPG,THCAKIRC
ENSG00000180769ENSG00000146085MMUTKICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000147853AK3KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000148218ALADKICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000175662TOM1L2KICH,KIRC,KIRP,LGG,THCAKIRC
ENSG00000180769ENSG00000180354MTURNKICH,KIRC,KIRP,LGG,THCAKICH,KIRC
ENSG00000180769ENSG00000198908BHLHB9KICH,KIRC,KIRP,PCPG,THCAKIRC

Top

lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

Top

lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

Top

lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000619979-0.4940358KIRC-
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000621444-0.1204268KIRC-
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000614830-0.12051KIRC-
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000613081-0.7525268KIRC-
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000616685-0.124612KIRC-
ENSG00000180769ENST00000624443NOP16ENSG00000048162ENST00000502663-0.12461KIRC-
ENSG00000180769ENST00000624443DLGAP4ENSG00000080845ENST00000373907-0.25531KICH-
ENSG00000180769ENST00000624443DLGAP4ENSG00000080845ENST00000340491-0.20531KICH-
ENSG00000180769ENST00000624443GRAMD1AENSG00000089351ENST00000600231-0.11881KIRC-
ENSG00000180769ENST00000624443GRAMD1AENSG00000089351ENST00000424536-0.12271KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000324432-0.13171KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000446600-0.13171KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000413936-0.13171KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000430490-0.13171KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000446820-1.5709103KIRC-
ENSG00000180769ENST00000624443DTX2ENSG00000091073ENST00000435251-0.114511KIRC-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000318443-0.10401KIRC,KICH-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000537340-0.15621KIRC,KICH-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000318424-0.10401KIRC,KICH-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000567582-0.11951KIRC,KICH-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000561176-0.4900384KIRC,KICH-
ENSG00000180769ENST00000624443CD276ENSG00000103855ENST00000559073-0.10401KIRC,KICH-
ENSG00000180769ENST00000624443LIMK1ENSG00000106683ENST00000418310-0.10901KICH-
ENSG00000180769ENST00000624443LIMK1ENSG00000106683ENST00000336180-0.10901KICH-
ENSG00000180769ENST00000624443LIMK1ENSG00000106683ENST00000435201-0.10101KICH-
ENSG00000180769ENST00000624443LIMK1ENSG00000106683ENST00000538333-0.16212KICH-
ENSG00000180769ENST00000624443P3H1ENSG00000117385ENST00000431412-0.14591KIRC-
ENSG00000180769ENST00000624443NCLNENSG00000125912ENST00000590671-0.235832KICH-
ENSG00000180769ENST00000624443NCLNENSG00000125912ENST00000246117-0.10361KICH-
ENSG00000180769ENST00000624443NCLNENSG00000125912ENST00000587740-0.198232KICH-
ENSG00000180769ENST00000624443NCLNENSG00000125912ENST00000592737-0.10361KICH-
ENSG00000180769ENST00000624443NCLNENSG00000125912ENST00000592235-0.235832KICH-
ENSG00000180769ENST00000624443COLGALT1ENSG00000130309ENST00000252599-0.10361KIRC-
ENSG00000180769ENST00000624443PPANENSG00000130810ENST00000253107-0.171210KICH-
ENSG00000180769ENST00000624443PPANENSG00000130810ENST00000393793-0.235547KICH-
ENSG00000180769ENST00000624443PPANENSG00000130810ENST00000444703-0.171210KICH-
ENSG00000180769ENST00000624443SLC16A3ENSG00000141526ENST00000581287-0.10151KIRC-
ENSG00000180769ENST00000624443SLC16A3ENSG00000141526ENST00000583025-0.399494KIRC-
ENSG00000180769ENST00000624443SH3GL1ENSG00000141985ENST00000269886-0.11531KIRC-
ENSG00000180769ENST00000624443SH3GL1ENSG00000141985ENST00000598564-0.11531KIRC-
ENSG00000180769ENST00000624443SH3GL1ENSG00000141985ENST00000417295-0.18721KIRC-
ENSG00000180769ENST00000624443DPP9ENSG00000142002ENST00000601720-0.170429KIRC,KICH-
ENSG00000180769ENST00000624443DPP9ENSG00000142002ENST00000597849-0.10731KIRC,KICH-
ENSG00000180769ENST00000624443DPP9ENSG00000142002ENST00000600556-0.13321KIRC,KICH-
ENSG00000180769ENST00000624443CDCA5ENSG00000146670ENST00000529290-0.7617164KIRC,KICH-
ENSG00000180769ENST00000624443CDCA5ENSG00000146670ENST00000404147-1.0130153KIRC,KICH-
ENSG00000180769ENST00000624443REEP4ENSG00000168476ENST00000334530-0.12851KIRC,KICH-
ENSG00000180769ENST00000624443REEP4ENSG00000168476ENST00000306306-0.22901KIRC,KICH-
ENSG00000180769ENST00000624443REEP4ENSG00000168476ENST00000523293-0.18522KIRC,KICH-
ENSG00000180769ENST00000624443PTP4A3ENSG00000184489ENST00000521578-0.17641KIRC,KICH-
ENSG00000180769ENST00000624443PTP4A3ENSG00000184489ENST00000520105-0.15951KIRC,KICH-
ENSG00000180769ENST00000624443PTP4A3ENSG00000184489ENST00000524028-0.15951KIRC,KICH-
ENSG00000180769ENST00000624443PTP4A3ENSG00000184489ENST00000329397-0.13121KIRC,KICH-
ENSG00000180769ENST00000624443PTP4A3ENSG00000184489ENST00000349124-0.13121KIRC,KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000530047-0.108828KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000527078-1.7750228KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000402965-0.108828KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000532887-0.18451KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000329994-0.108828KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000526779-0.106160KICH-
ENSG00000180769ENST00000624443SLC52A2ENSG00000185803ENST00000526752-0.112921KICH-
ENSG00000180769ENST00000318186NOP16ENSG00000048162ENST00000619979-0.59621433KIRC-
ENSG00000180769ENST00000318186NOP16ENSG00000048162ENST00000621444-0.35921416KIRC-
ENSG00000180769ENST00000318186NOP16ENSG00000048162ENST00000613081-0.35921416KIRC-
ENSG00000180769ENST00000318186NOP16ENSG00000048162ENST00000616685-0.16521KIRC-
ENSG00000180769ENST00000318186NOP16ENSG00000048162ENST00000502663-0.1080634KIRC-
ENSG00000180769ENST00000318186DTX2ENSG00000091073ENST00000446820-0.6006297KIRC-
ENSG00000180769ENST00000318186DTX2ENSG00000091073ENST00000435251-0.120872KIRC-
ENSG00000180769ENST00000318186CD276ENSG00000103855ENST00000561176-0.4900542KIRC,KICH-
ENSG00000180769ENST00000318186LIMK1ENSG00000106683ENST00000538333-0.1194395KICH-
ENSG00000180769ENST00000318186P3H1ENSG00000117385ENST00000431412-0.1099759KIRC-
ENSG00000180769ENST00000318186NCLNENSG00000125912ENST00000590671-0.165774KICH-
ENSG00000180769ENST00000318186NCLNENSG00000125912ENST00000587740-0.168185KICH-
ENSG00000180769ENST00000318186NCLNENSG00000125912ENST00000592235-0.159580KICH-
ENSG00000180769ENST00000318186PPANENSG00000130810ENST00000253107-0.1209225KICH-
ENSG00000180769ENST00000318186PPANENSG00000130810ENST00000393793-0.202322KICH-
ENSG00000180769ENST00000318186PPANENSG00000130810ENST00000444703-0.1242210KICH-
ENSG00000180769ENST00000318186SLC16A3ENSG00000141526ENST00000583025-0.4263801KIRC-
ENSG00000180769ENST00000318186SH3GL1ENSG00000141985ENST00000417295-0.111751KIRC-
ENSG00000180769ENST00000318186DPP9ENSG00000142002ENST00000601720-0.1891125KIRC,KICH-
ENSG00000180769ENST00000318186CDCA5ENSG00000146670ENST00000529290-2.8750779KIRC,KICH-
ENSG00000180769ENST00000318186CDCA5ENSG00000146670ENST00000404147-0.647563KIRC,KICH-
ENSG00000180769ENST00000318186REEP4ENSG00000168476ENST00000523293-0.1682722KIRC,KICH-
ENSG00000180769ENST00000318186PTP4A3ENSG00000184489ENST00000521578-0.1027626KIRC,KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000530047-0.1151619KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000527078-1.7750386KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000402965-0.1151619KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000532887-0.1326648KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000329994-0.1151617KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000526779-0.103954KICH-
ENSG00000180769ENST00000318186SLC52A2ENSG00000185803ENST00000526752-0.1052618KICH-
ENSG00000180769ENST00000451762NOP16ENSG00000048162ENST00000619979-0.29744699KIRC-
ENSG00000180769ENST00000451762NOP16ENSG00000048162ENST00000621444-0.35921374KIRC-
ENSG00000180769ENST00000451762NOP16ENSG00000048162ENST00000613081-0.35921374KIRC-
ENSG00000180769ENST00000451762NOP16ENSG00000048162ENST00000502663-0.11893774KIRC-
ENSG00000180769ENST00000451762DTX2ENSG00000091073ENST00000446820-0.600685KIRC-
ENSG00000180769ENST00000451762CD276ENSG00000103855ENST00000561176-0.63473060KIRC,KICH-
ENSG00000180769ENST00000451762LIMK1ENSG00000106683ENST00000538333-0.11973348KICH-
ENSG00000180769ENST00000451762P3H1ENSG00000117385ENST00000431412-0.1266122KIRC-
ENSG00000180769ENST00000451762NCLNENSG00000125912ENST00000590671-0.13463822KICH-
ENSG00000180769ENST00000451762NCLNENSG00000125912ENST00000587740-0.1534604KICH-
ENSG00000180769ENST00000451762NCLNENSG00000125912ENST00000592235-0.12683828KICH-
ENSG00000180769ENST00000451762PPANENSG00000130810ENST00000253107-0.11163911KICH-
ENSG00000180769ENST00000451762PPANENSG00000130810ENST00000393793-0.23425744KICH-
ENSG00000180769ENST00000451762PPANENSG00000130810ENST00000444703-0.12333909KICH-
ENSG00000180769ENST00000451762SLC16A3ENSG00000141526ENST00000583025-0.28791817KIRC-
ENSG00000180769ENST00000451762DPP9ENSG00000142002ENST00000601720-0.13344032KIRC,KICH-
ENSG00000180769ENST00000451762CDCA5ENSG00000146670ENST00000529290-0.41001830KIRC,KICH-
ENSG00000180769ENST00000451762CDCA5ENSG00000146670ENST00000404147-0.94633914KIRC,KICH-
ENSG00000180769ENST00000451762REEP4ENSG00000168476ENST00000523293-0.1682680KIRC,KICH-
ENSG00000180769ENST00000451762PTP4A3ENSG00000184489ENST00000521578-0.11773722KIRC,KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000530047-0.1151577KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000527078-1.7750174KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000402965-0.1151577KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000532887-0.1326606KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000329994-0.1151575KICH-
ENSG00000180769ENST00000451762SLC52A2ENSG00000185803ENST00000526752-0.1052576KICH-
ENSG00000180769ENST00000624443SNRPBENSG00000125835ENST00000381342-0.12031KICH-
ENSG00000180769ENST00000624443SNRPBENSG00000125835ENST00000438552-0.17071KICH-
ENSG00000180769ENST00000624443SNRPBENSG00000125835ENST00000339610-0.17071KICH-
ENSG00000180769ENST00000624443TOMM40ENSG00000130204ENST00000252487-0.12871KICH-
ENSG00000180769ENST00000624443TOMM40ENSG00000130204ENST00000405636-0.12871KICH-
ENSG00000180769ENST00000624443TOMM40ENSG00000130204ENST00000426677-0.12871KICH-
ENSG00000180769ENST00000624443TOMM40ENSG00000130204ENST00000592041-0.130578KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000548898-0.11991KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000420846-0.150864KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000552067-0.150864KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000548160-0.174917KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000546939-0.174917KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000552692-0.174917KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000549117-0.174917KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000257857-0.174917KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000552754-0.3786420KICH-
ENSG00000180769ENST00000624443CD63ENSG00000135404ENST00000550776-0.968319KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000251166-0.100355KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000571227-0.11021KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000574025-0.10931KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000570779-0.419487KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000576437-0.108058KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000570928-0.159340KIRC,KICH-
ENSG00000180769ENST00000624443CORO7ENSG00000262246ENST00000572153-0.12511KIRC,KICH-
ENSG00000180769ENST00000318186SNRPBENSG00000125835ENST00000438552-0.1631195KICH-
ENSG00000180769ENST00000318186SNRPBENSG00000125835ENST00000339610-0.1631204KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000420846-0.1046510KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000552067-0.1016241KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000548160-0.1303149KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000546939-0.1303149KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000552692-0.1303149KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000549117-0.144478KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000257857-0.144483KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000552754-0.6238309KICH-
ENSG00000180769ENST00000318186CD63ENSG00000135404ENST00000550776-1.1783681KICH-
ENSG00000180769ENST00000318186CORO7ENSG00000262246ENST00000570779-0.43111113KIRC,KICH-
ENSG00000180769ENST00000318186CORO7ENSG00000262246ENST00000570928-0.54901086KIRC,KICH-
ENSG00000180769ENST00000318186CORO7ENSG00000262246ENST00000572153-0.12471KIRC,KICH-
ENSG00000180769ENST00000451762SNRPBENSG00000125835ENST00000438552-0.13493817KICH-
ENSG00000180769ENST00000451762SNRPBENSG00000125835ENST00000339610-0.15263826KICH-
ENSG00000180769ENST00000451762TOMM40ENSG00000130204ENST00000592041-0.11333476KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000420846-0.11974076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000552067-0.11974076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000548160-0.14874076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000546939-0.14874076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000552692-0.14874076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000549117-0.37434076KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000257857-0.29953056KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000552754-0.58195761KICH-
ENSG00000180769ENST00000451762CD63ENSG00000135404ENST00000550776-1.1783639KICH-
ENSG00000180769ENST00000451762CORO7ENSG00000262246ENST00000570779-0.43111071KIRC,KICH-
ENSG00000180769ENST00000451762CORO7ENSG00000262246ENST00000570928-0.54901044KIRC,KICH-
ENSG00000180769ENST00000451762CORO7ENSG00000262246ENST00000572153-0.10303760KIRC,KICH-

Top

lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

Top

lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000180769.7ENST00000624443.270200412
ENSG00000180769.7ENST00000318186.51033102
ENSG00000180769.7ENST00000451762.310274382