|
lncRNA: ENSG00000180139 |
Summary for ACTA2-AS1 |
Gene summary |
Gene information | Ensembl ID | ENSG00000180139 | Gene symbol | ACTA2-AS1 |
Gene name | ACTA2 antisense RNA 1 | |
HGNC | 45169 | |
Entrez ID | 100132116 | |
Gene type | antisense | |
Synonyms | ACTA2-AS1|10q23.31 | |
UniProtAcc |
Top |
Structure and expression level for ACTA2-AS1 |
AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
Differentially expressed gene analysis between cancer and normal samples. |
Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000180139 | 2.562352e+02 | -1.000146e+00 | 1.772989e-01 | -5.641015e+00 | 1.690000e-08 | 9.410000e-08 | DOWN | PRAD |
ENSG00000180139 | 2.480953e+02 | -2.544123e+00 | 1.397734e-01 | -1.820178e+01 | 5.000000e-74 | 2.210000e-72 | DOWN | BRCA |
ENSG00000180139 | 3.202862e+02 | -1.386122e+00 | 2.951778e-01 | -4.695888e+00 | 2.650000e-06 | 1.610000e-05 | DOWN | STAD |
Correlation between lncRNAs and cancer stages. |
LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
Top |
lncRNA-Protein interaction for ACTA2-AS1 |
lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|