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lncRNA: ENSG00000166770

Summary for ZNF667-AS1

Gene summary

Gene information	Ensembl ID	ENSG00000166770
	Gene symbol	ZNF667-AS1
	Gene name	ZNF667 antisense RNA 1 (head to head)
	HGNC	44321
	Entrez ID	100128252
	Gene type	lincRNA
	Synonyms	ZNF667-AS1\|19q13.43
	UniProtAcc

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Structure and expression level for ZNF667-AS1

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000166770	6.347571e+02	-1.407322e+00	1.310275e-01	-1.074067e+01	6.560000e-27	5.750000e-26	DOWN	KIRC
ENSG00000166770	5.916685e+02	-1.061007e+00	2.927039e-01	-3.624848e+00	2.891320e-04	8.179540e-04	DOWN	KIRP
ENSG00000166770	3.340234e+02	-1.558140e+00	2.475325e-01	-6.294691e+00	3.080000e-10	4.020000e-09	DOWN	STAD

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000166770	-3.909862e-01	1.516304e-04	KICH	2.463994e-04
ENSG00000166770	-4.238043e-01	6.734669e-28	KIRC	1.782706e-26
ENSG00000166770	-3.588418e-01	2.662965e-10	KIRP	3.389732e-09
ENSG00000166770	-3.037201e-01	6.506622e-03	UVM	2.881504e-02

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lncRNA-Protein interaction for ZNF667-AS1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000198919	DZIP3	51.99	91.6242	Q86Y13	RBP,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000011451	WIZ	46.78	92.4286	O95785	TF	Predict
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000198300	PEG3	45.9	92.8925	Q9GZU2	TF	Predict
ENSG00000166770	ENST00000592146	ZNF667-AS1	ENSG00000167232	ZNF91	43.33	91.5246	Q05481	TF	NA
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000126464	PRR12	36.7	90.0142	Q9ULL5	TF	NA
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000196670	ZFP62	35.61	90.8509	Q8NB50	TF	NA
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000169981	ZNF35	15.77	90.7928	P13682	TF	NA
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000174282	ZBTB4	77.28	90.2525	Q9P1Z0	TF	NA
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000198300	PEG3	46.97	91.994	Q9GZU2	TF	Predict
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000167232	ZNF91	42.32	90.972	Q05481	TF	NA
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000198521	ZNF43	40.2	90.6992	P17038	TF	NA
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000197857	ZNF44	13.99	90.6919	P15621	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000166770	ENST00000588158	ZNF667-AS1	ENSG00000056097	ZFR	75.33	91.6961	Q96KR1	RBP	NA
ENSG00000166770	ENST00000588685	ZNF667-AS1	ENSG00000198919	DZIP3	51.99	91.7804	Q86Y13	RBP,Epi	NA
ENSG00000166770	ENST00000586822	ZNF667-AS1	ENSG00000056097	ZFR	75.3	92.5697	Q96KR1	RBP	NA

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lncRNA-DNA interaction for ZNF667-AS1

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

CNOT4,ZNF30,PRR12,MECP2,PHF1,ZNF14,KHDC1,ZBTB4,DZIP1,ZBED3,DZIP3,CIRBP,SMAD4,MEX3A,ZFP62,ZNF44,MZF1,ZNF43,MEX3D,ZFP28,ZNF17,FOXC1,ZNF91,WIZ,ZNF28,ZNF84,ZNF45,SUGP2,RBM4B,SCMH1,RXRB,TIGD1,ZFP1,ZIK1,GZF1,PCBP4,ZNF77,RBM18,HOMEZ,NFIA,XPA,DDX31,FIZ1,ZFP30,SALL2,TFDP2,ZFP3,DACH1,USF2,ZBTB5,ZFP14,LARP6,ZFR,ZNF71,ZNF8,PATZ1,EIF2D,ATF2,SIX5,ZNF10

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

MZF1,ZBTB4,MECP2,ZNF14,HLF,HOMEZ,MEX3A,EIF2D,ZNF71,ZNF30,NFIA,RXRB,CIRBP

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for ZNF667-AS1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

RELB,SPI1,NFKB2,BATF

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000166770	ENST00000601875	exon_skip_48327	chr10:26771074-26771089	-2.82	-0.7050	ABI1	ENST00000376142	In-frame
ENSG00000166770	ENST00000601875	exon_skip_150854	chr17:32366664-32366757	-9.39	-0.1323	ZNF207	ENST00000321233	In-frame
ENSG00000166770	ENST00000591797	exon_skip_430112	chr4:75653982-75654081	-12.15	-0.1335	G3BP2	ENST00000359707,ENST00000395719	In-frame
ENSG00000166770	ENST00000601875	exon_skip_460899	chr6:85538837-85538864	-4.42	-0.6314	SNX14	ENST00000314673	In-frame
ENSG00000166770	ENST00000601875	exon_skip_499791	chr9:128627924-128627942	-5.39	-0.6737	SPTAN1	ENST00000372731	In-frame

-lncRNA and exonskipping events are negatively correlated.

lncRNA and exonskipping events negative correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	LOF
ENSG00000166770	ENST00000601875	exon_skip_106783	chr14:55673171-55673255	-6.99	-0.1110	KTN1	ENST00000395314	In-frame
ENSG00000166770	ENST00000601875	exon_skip_131398	chr15:101286213-101286293	-10.23	-0.1346	SNRPA1	ENST00000254193	Frame-shift
ENSG00000166770	ENST00000601875	exon_skip_303809	chr19:18431352-18431418	-8.38	-0.4190	SSBP4	ENST00000270061	In-frame
ENSG00000166770	ENST00000601875	exon_skip_324294	chr2:27774423-27774530	-10.91	-0.1102	MRPL33	ENST00000296102	Frame-shift
ENSG00000166770	ENST00000601875	exon_skip_111510	chr14:22952540-22952683	-11.46	-0.1091	HAUS4	ENST00000206474,ENST00000541587	Frame-shift
ENSG00000166770	ENST00000601875	exon_skip_451712	chr6:42880860-42880966	-7.81	-0.4339	RPL7L1	ENST00000304734,ENST00000493763	Frame-shift
ENSG00000166770	ENST00000592146	exon_skip_476029	chr7:65974918-65975071	-13.79	-0.1140	GUSB	ENST00000304895	In-frame

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000166770	hsa-mir-155	ENST00000588685	chr19:56478555-56478625	156.00	-64.70	66	NA
ENSG00000166770	hsa-mir-155	ENST00000588685	chr19:56477620-56477687	152.00	-52.40	64	NA
ENSG00000166770	hsa-mir-155	ENST00000588685	chr19:56478349-56478412	144.00	-56.22	53	NA
ENSG00000166770	hsa-mir-155	ENST00000586822	chr19:56477620-56477687	152.00	-52.40	64	NA
ENSG00000166770	hsa-mir-155	ENST00000586822	chr19:56477874-56477935	142.00	-51.25	56	NA
ENSG00000166770	hsa-mir-155	ENST00000594783	chr19:56478397-56478464	153.00	-50.19	64	NA
ENSG00000166770	hsa-mir-155	ENST00000588158	chr19:56478997-56479060	174.00	-56.51	63	NA
ENSG00000166770	hsa-mir-155	ENST00000591797	chr19:56478498-56478565	153.00	-50.19	64	NA
ENSG00000166770	hsa-mir-155	ENST00000591797	chr19:56478360-56478422	140.00	-51.29	59	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56477919-56477989	160.00	-74.13	55	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56478135-56478211	160.00	-83.69	71	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56478527-56478599	158.00	-71.17	71	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56478017-56478095	155.00	-71.71	76	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56477382-56477457	153.00	-77.40	75	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56477762-56477843	150.00	-77.15	77	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56477632-56477696	147.00	-58.62	65	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56477546-56477622	146.00	-81.33	75	NA
ENSG00000166770	hsa-mir-21	ENST00000588685	chr19:56478326-56478395	141.00	-72.91	68	NA
ENSG00000166770	hsa-mir-21	ENST00000586822	chr19:56477762-56477843	150.00	-77.15	77	NA
ENSG00000166770	hsa-mir-21	ENST00000586822	chr19:56477954-56478023	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000586822	chr19:56477632-56477696	147.00	-58.62	65	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56478474-56478543	170.00	-57.39	69	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56478135-56478211	160.00	-83.69	71	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56479530-56479607	152.00	-60.71	77	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56478410-56478479	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56478844-56478911	147.00	-52.61	65	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56479438-56479522	146.00	-63.00	77	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56478688-56478756	141.00	-52.31	66	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56479275-56479350	140.00	-61.04	76	NA
ENSG00000166770	hsa-mir-21	ENST00000585445	chr19:56479373-56479443	140.00	-57.77	67	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478474-56478543	170.00	-57.39	69	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478410-56478479	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478733-56478817	146.00	-63.00	77	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478195-56478263	141.00	-74.71	65	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478570-56478645	140.00	-61.04	76	NA
ENSG00000166770	hsa-mir-21	ENST00000586091	chr19:56478668-56478738	140.00	-57.77	67	NA
ENSG00000166770	hsa-mir-21	ENST00000594783	chr19:56478559-56478628	170.00	-57.39	69	NA
ENSG00000166770	hsa-mir-21	ENST00000594783	chr19:56478495-56478564	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000594783	chr19:56478230-56478312	145.00	-86.63	81	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478369-56478438	170.00	-57.39	69	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478720-56478797	152.00	-60.71	77	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478305-56478374	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478628-56478712	146.00	-63.00	77	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478195-56478263	141.00	-74.71	65	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478465-56478540	140.00	-61.04	76	NA
ENSG00000166770	hsa-mir-21	ENST00000592146	chr19:56478563-56478633	140.00	-57.77	67	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478414-56478490	163.00	-64.90	70	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478554-56478615	158.00	-67.35	68	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478631-56478701	155.00	-68.16	73	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478807-56478880	143.00	-57.61	69	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478979-56479043	143.00	-63.52	69	NA
ENSG00000166770	hsa-mir-21	ENST00000588158	chr19:56478195-56478263	141.00	-74.71	65	NA
ENSG00000166770	hsa-mir-21	ENST00000591797	chr19:56478596-56478665	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000591797	chr19:56478660-56478725	142.00	-57.00	66	NA
ENSG00000166770	hsa-mir-21	ENST00000591797	chr19:56478195-56478263	141.00	-74.71	65	NA
ENSG00000166770	hsa-mir-21	ENST00000601875	chr19:56478386-56478455	170.00	-57.39	69	NA
ENSG00000166770	hsa-mir-21	ENST00000601875	chr19:56478322-56478391	150.00	-63.33	64	NA
ENSG00000166770	hsa-mir-21	ENST00000601875	chr19:56478600-56478668	141.00	-52.31	66	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477706-56477786	189.00	-81.56	62	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477636-56477716	188.00	-73.16	77	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477421-56477512	187.00	-93.12	83	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56478031-56478112	180.00	-82.69	69	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477352-56477425	167.00	-91.68	79	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477777-56477874	161.00	-100.40	84	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56478173-56478266	154.00	-100.73	88	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477264-56477347	150.00	-92.34	65	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477499-56477578	149.00	-91.65	73	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56478551-56478636	145.00	-94.68	82	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56477883-56477967	144.00	-95.07	85	NA
ENSG00000166770	hsa-mir-185	ENST00000588685	chr19:56478377-56478455	144.00	-81.89	80	NA
ENSG00000166770	hsa-mir-185	ENST00000586822	chr19:56477706-56477786	189.00	-81.56	62	NA
ENSG00000166770	hsa-mir-185	ENST00000586822	chr19:56477636-56477716	188.00	-73.16	77	NA
ENSG00000166770	hsa-mir-185	ENST00000586822	chr19:56477777-56477874	161.00	-100.40	84	NA
ENSG00000166770	hsa-mir-185	ENST00000586822	chr19:56477953-56478037	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000585445	chr19:56479572-56479648	162.00	-75.51	77	NA
ENSG00000166770	hsa-mir-185	ENST00000585445	chr19:56478173-56478266	154.00	-100.73	88	NA
ENSG00000166770	hsa-mir-185	ENST00000585445	chr19:56479461-56479550	154.00	-77.46	87	NA
ENSG00000166770	hsa-mir-185	ENST00000585445	chr19:56478409-56478493	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000585445	chr19:56478509-56478588	145.00	-74.18	70	NA
ENSG00000166770	hsa-mir-185	ENST00000586091	chr19:56478173-56478266	154.00	-100.73	88	NA
ENSG00000166770	hsa-mir-185	ENST00000586091	chr19:56478409-56478493	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000594783	chr19:56478173-56478266	154.00	-100.73	88	NA
ENSG00000166770	hsa-mir-185	ENST00000594783	chr19:56478494-56478578	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000592146	chr19:56478762-56478838	162.00	-75.51	77	NA
ENSG00000166770	hsa-mir-185	ENST00000592146	chr19:56478651-56478740	154.00	-77.46	87	NA
ENSG00000166770	hsa-mir-185	ENST00000592146	chr19:56478184-56478266	148.00	-91.81	80	NA
ENSG00000166770	hsa-mir-185	ENST00000592146	chr19:56478304-56478388	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478605-56478676	180.00	-79.63	74	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478661-56478750	169.00	-79.66	77	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478480-56478568	164.00	-78.02	81	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478372-56478454	157.00	-66.22	78	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478234-56478336	153.00	-87.61	99	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478890-56478968	150.00	-69.06	69	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478969-56479041	149.00	-81.48	61	NA
ENSG00000166770	hsa-mir-185	ENST00000588158	chr19:56478817-56478901	148.00	-74.72	79	NA
ENSG00000166770	hsa-mir-185	ENST00000591797	chr19:56478234-56478336	153.00	-87.61	99	NA
ENSG00000166770	hsa-mir-185	ENST00000591797	chr19:56478595-56478679	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000601875	chr19:56478321-56478405	148.00	-78.89	88	NA
ENSG00000166770	hsa-mir-185	ENST00000601875	chr19:56478421-56478500	145.00	-74.18	70	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56477850-56477922	178.00	-84.41	83	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56478222-56478313	171.00	-82.83	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56477375-56477472	166.00	-99.88	89	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56478507-56478604	166.00	-89.95	92	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56477944-56478026	154.00	-92.84	82	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56478085-56478171	152.00	-86.97	67	NA
ENSG00000166770	hsa-mir-3614	ENST00000588685	chr19:56477272-56477358	149.00	-96.25	86	NA
ENSG00000166770	hsa-mir-3614	ENST00000586822	chr19:56477850-56477922	178.00	-84.41	83	NA
ENSG00000166770	hsa-mir-3614	ENST00000586822	chr19:56477919-56478013	164.00	-77.61	90	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56478801-56478881	173.00	-75.03	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56478222-56478313	171.00	-82.83	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56479391-56479481	166.00	-75.83	85	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56478374-56478469	161.00	-75.04	93	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56479008-56479100	153.00	-69.92	91	NA
ENSG00000166770	hsa-mir-3614	ENST00000585445	chr19:56479508-56479597	144.00	-71.03	90	NA
ENSG00000166770	hsa-mir-3614	ENST00000586091	chr19:56478222-56478313	171.00	-82.83	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000586091	chr19:56478686-56478776	166.00	-75.83	85	NA
ENSG00000166770	hsa-mir-3614	ENST00000586091	chr19:56478374-56478469	161.00	-75.04	93	NA
ENSG00000166770	hsa-mir-3614	ENST00000586091	chr19:56478503-56478590	158.00	-71.99	89	NA
ENSG00000166770	hsa-mir-3614	ENST00000594783	chr19:56478222-56478314	180.00	-92.66	90	NA
ENSG00000166770	hsa-mir-3614	ENST00000594783	chr19:56478454-56478554	163.00	-79.91	97	NA
ENSG00000166770	hsa-mir-3614	ENST00000594783	chr19:56478360-56478459	144.00	-71.87	96	NA
ENSG00000166770	hsa-mir-3614	ENST00000592146	chr19:56478581-56478671	166.00	-75.83	85	NA
ENSG00000166770	hsa-mir-3614	ENST00000592146	chr19:56478270-56478364	164.00	-77.49	90	NA
ENSG00000166770	hsa-mir-3614	ENST00000592146	chr19:56478398-56478485	158.00	-71.99	89	NA
ENSG00000166770	hsa-mir-3614	ENST00000592146	chr19:56478184-56478246	147.00	-67.58	70	NA
ENSG00000166770	hsa-mir-3614	ENST00000592146	chr19:56478698-56478787	144.00	-71.03	90	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478598-56478684	187.00	-82.35	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478370-56478450	179.00	-69.41	78	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478973-56479064	175.00	-76.62	91	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478222-56478313	171.00	-82.83	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478515-56478596	162.00	-85.16	88	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478832-56478913	145.00	-80.68	85	NA
ENSG00000166770	hsa-mir-3614	ENST00000588158	chr19:56478441-56478522	140.00	-77.02	84	NA
ENSG00000166770	hsa-mir-3614	ENST00000591797	chr19:56478222-56478313	171.00	-82.83	87	NA
ENSG00000166770	hsa-mir-3614	ENST00000591797	chr19:56478555-56478655	163.00	-79.91	97	NA
ENSG00000166770	hsa-mir-3614	ENST00000591797	chr19:56478378-56478469	155.00	-73.00	88	NA
ENSG00000166770	hsa-mir-3614	ENST00000591797	chr19:56478461-56478560	144.00	-71.87	96	NA
ENSG00000166770	hsa-mir-3614	ENST00000601875	chr19:56478286-56478381	161.00	-74.25	89	NA

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Variants for ZNF667-AS1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000166770	ENSG00000197857	ZNF44	ENSG00000105708	ZNF14	5	ACC,KICH,KIRP,PAAD,THCA

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000166770	ZNF667-AS1,hsa-mir-185,NGRN	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,PGAP1	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,BAZ2B	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,OBSL1	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,BMPR2	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,MARF1	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,LTBP3	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,CASKIN2	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,ZBED8	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-185,KMT2E	KICH,TGCT,UCS,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CAND2	PCPG,THCA,UVM,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,GDAP1	PCPG,TGCT,THCA,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ANKRD46	CESC,TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,VAMP2	CESC,THCA,UVM,PAAD,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ACOX2	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ARHGEF9	PCPG,TGCT,THCA,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,NICN1	TGCT,THCA,UVM,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,RNF150	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,TMEM25	PCPG,TGCT,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,TSPYL4	PCPG,TGCT,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CBR4	PCPG,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,APOOL	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,EPHX2	THCA,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,RPP14	PCPG,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,APBB1	CESC,TGCT,UVM,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CLIP3	PCPG,CESC,TGCT,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,KBTBD7	PCPG,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,AMIGO1	THCA,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CNST	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,PDK2	TGCT,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,NISCH	PCPG,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,USP30	PCPG,TGCT,THCA,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,NDN	CESC,TGCT,UVM,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CIPC	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,RALGAPA1	PCPG,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ITPR1	CESC,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,WWOX	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,DMAC2L	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,FAXDC2	PCPG,CESC,TGCT,THCA,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,RTL5	PCPG,CESC,TGCT,PAAD,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,FAM107A	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,GPRASP1	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,GPRASP2	CESC,TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,LYRM7	PCPG,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,NAP1L2	PCPG,THCA,UVM,PAAD,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CAPN7	PCPG,TGCT,THCA,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ST3GAL3	CESC,TGCT,UVM,PAAD,SARC
ENSG00000166770	ZNF667-AS1,hsa-mir-21,CRY2	CESC,THCA,UVM,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,MOAP1	TGCT,THCA,PAAD,SARC,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-21,ABAT	PCPG,TGCT,THCA,PAAD,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-3614,SMO	TGCT,THCA,MESO,SARC,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,CRY2	THCA,UVM,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,USP30	PCPG,TGCT,THCA,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,SCOC	PCPG,TGCT,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,HOOK1	TGCT,THCA,UVM,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,RAB40B	PCPG,TGCT,THCA,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,USP27X	PCPG,TGCT,UVM,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,DCAKD	PCPG,TGCT,THCA,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,OSBPL2	PCPG,TGCT,THCA,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,CLCN4	PCPG,TGCT,THCA,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,ZADH2	PCPG,THCA,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,PREPL	PCPG,THCA,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,EPM2AIP1	PCPG,TGCT,THCA,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,NGRN	TGCT,THCA,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,VAPB	TGCT,THCA,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,SALL2	PCPG,TGCT,THCA,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,BCKDHB	TGCT,THCA,UVM,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,BEX4	PCPG,TGCT,THCA,UVM,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,PTPN21	TGCT,THCA,UVM,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,MARVELD2	TGCT,THCA,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,WASF3	TGCT,THCA,UVM,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,HDAC11	TGCT,THCA,UVM,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,PLXNB1	PCPG,TGCT,UVM,PAAD,THYM
ENSG00000166770	ZNF667-AS1,hsa-mir-155,TSPYL4	PCPG,TGCT,PAAD,THYM,KIRP
ENSG00000166770	ZNF667-AS1,hsa-mir-155,ALDH6A1	TGCT,UVM,PAAD,THYM,KIRP

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000166770.9	ENST00000588685.1	98	99	395
ENSG00000166770.9	ENST00000586822.1	330	1422	430
ENSG00000166770.9	ENST00000585445.1	102	13	321
ENSG00000166770.9	ENST00000586091.4	70	433	645
ENSG00000166770.9	ENST00000594783.4	69	249	458
ENSG00000166770.9	ENST00000592146.2	47	332	472
ENSG00000166770.9	ENST00000588158.1	69	116	325
ENSG00000166770.9	ENST00000591797.1	77	627	394
ENSG00000166770.9	ENST00000601875.1	75	94	321

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential